Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for matr3l1.1_1

Gene Name Gene ID Reads Annotation
matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]










Genes with expression patterns similar to matr3l1.1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
2. yeats4 ENSDARG00000045874 1168 3.167 - - - 0.889 - - 0.826 0.733 0.719 YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
3. xrcc1 ENSDARG00000009494 1346 2.538 0.856 - - 0.756 - 0.926 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
4. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 2.481 - 0.804 - - - 0.934 - - 0.743 replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
5. CABZ01034082.1 ENSDARG00000099583 2237 2.474 - 0.733 0.998 - - - 0.743 - -
6. Sep-06 Sep-06 5465 2.296 - 0.767 - - - - 0.782 - 0.747
7. efnb2a ENSDARG00000020164 5262 2.245 0.719 0.805 - - - - - - 0.721 ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
8. ACVR2B 6615 2.209 0.751 0.754 - - - - - - 0.704 activin A receptor, type IIB
9. puf60a ENSDARG00000032175 5618 2.177 - 0.709 - - - - 0.714 - 0.754 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
10. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1.963 - - 0.998 - - 0.965 - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
11. ENSDARG00000087348 ENSDARG00000087348 2870 1.957 - - 0.996 - - 0.961 - - -
12. slc39a10 ENSDARG00000005823 2634 1.87 - - 0.996 - - 0.874 - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
13. rab35 rab35 1287 1.866 - - 0.998 - - 0.868 - - -
14. map2k6 ENSDARG00000099184 8741 1.848 - - 0.910 - - 0.938 - - - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
15. rassf9 ENSDARG00000074721 448 1.84 - - - 0.895 - 0.945 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
16. cops5 ENSDARG00000057624 1485 1.839 - - 0.996 - - 0.843 - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
17. dnaja2 ENSDARG00000104066 11946 1.807 - - 0.943 - - 0.864 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
18. brd8 ENSDARG00000025071 2605 1.804 - - 0.997 - - 0.807 - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
19. FUZ ENSDARG00000079730 821 1.803 - - 0.998 - - 0.805 - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
20. psmg2 ENSDARG00000035987 1938 1.793 - - - - - 0.966 0.827 - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
21. pip5k1ab ENSDARG00000024642 1988 1.791 - - - - - 0.972 - 0.819 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
22. hiat1a ENSDARG00000013117 607 1.777 - - - 0.867 - 0.910 - - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
23. guk1a ENSDARG00000030340 517 1.777 - - - 0.851 - 0.926 - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
24. pip5k2 pip5k2 5743 1.774 - - 0.996 - - - 0.778 - -
25. rad54l ENSDARG00000018623 837 1.77 - 0.772 0.998 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
26. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.768 - - - 0.816 - 0.952 - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
27. sptssa ENSDARG00000071203 2306 1.765 - - - 0.867 - 0.898 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
28. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.76 - - - 0.851 - 0.909 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
29. mapk13 ENSDARG00000058470 1001 1.755 - - - 0.850 - 0.905 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
30. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.746 - - 0.955 0.791 - - - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
31. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.739 - - 0.998 - - - - - 0.741 zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
32. si:ch211-158d24.4 ENSDARG00000093048 281 1.731 - - - - - 0.953 0.778 - - si:ch211-158d24.4 [Source:ZFIN;Acc:ZDB-GENE-081104-141]
33. nrg1 ENSDARG00000104314 1081 1.727 - - - 0.871 - 0.856 - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
34. si:ch211-183d21.1 ENSDARG00000092499 1071 1.726 - 0.787 - - - 0.939 - - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
35. atl3 ENSDARG00000004270 2806 1.722 - - - 0.877 - 0.845 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
36. zgc:101846 15202 1.714 - - 0.980 - - - - - 0.734 zgc:101846
37. CUL3 CUL3 1133 1.711 - - - - - 0.935 0.776 - -
38. sh3bgrl3 ENSDARG00000098075 3071 1.711 - - 0.997 - - - - 0.714 - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
39. si:ch73-367f21.4 ENSDARG00000071097 862 1.708 - - - - - 0.918 0.790 - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
40. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.705 - - - - - 0.980 0.725 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
41. cdk2 ENSDARG00000026577 2835 1.705 - - 0.996 - - - - - 0.709 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
42. brd1b ENSDARG00000051798 1712 1.702 - - - - - 0.886 - - 0.816 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
43. WU:FC32F04 WU:FC32F04 2525 1.698 - - 0.944 - - 0.754 - - -
44. gpr146 ENSDARG00000059610 810 1.695 - 0.800 - 0.895 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
45. rwdd ENSDARG00000068256 964 1.695 - 0.765 - - - 0.930 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
46. mif ENSDARG00000071336 1328 1.691 - 0.764 - - - 0.927 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
47. CABZ01084815.1 CABZ01084815.1 351 1.691 - 0.763 - - - 0.928 - - -
48. zgc:163030 ENSDARG00000069192 2963 1.687 - - - 0.735 - 0.952 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
49. safb ENSDARG00000020467 5608 1.686 - - - - - 0.897 - - 0.789 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
50. klhl11 ENSDARG00000045130 800 1.685 - - - 0.774 - 0.911 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
51. chchd6a ENSDARG00000003206 421 1.682 - - - - - 0.932 0.750 - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
52. rfx2 ENSDARG00000013575 1275 1.681 0.757 - - - - 0.924 - - - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
53. hdgfrp2 7462 1.674 - 0.732 0.942 - - - - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
54. zgc:175214 ENSDARG00000022891 1013 1.672 - 0.709 - - - 0.963 - - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
55. elp3 ENSDARG00000042005 936 1.671 - - - - - 0.965 - 0.706 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
56. smek1 ENSDARG00000042187 3509 1.67 - - - - - 0.887 - - 0.783 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
57. prpf40a ENSDARG00000058467 6565 1.658 - - 0.917 - - - - - 0.741 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
58. snw1 ENSDARG00000091563 263 1.652 - 0.762 - - - 0.890 - - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
59. tet3 ENSDARG00000062646 6672 1.648 0.748 - - - - 0.900 - - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
60. stard3 ENSDARG00000017809 727 1.645 - - - 0.769 - 0.876 - - - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
61. acn9 acn9 520 1.642 - - - 0.746 - 0.896 - - -
62. GPR161 ENSDARG00000055659 1067 1.639 - 0.749 - - - 0.890 - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
63. cobl_1 ENSDARG00000091006 293 1.638 - - - - - 0.899 0.739 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
64. mxd3 ENSDARG00000098350 3040 1.638 - - - - - 0.868 - - 0.770 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
65. golga7ba ENSDARG00000036295 1460 1.636 - - - - - 0.823 - - 0.813 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
66. fam203a fam203a 570 1.633 - 0.729 - 0.904 - - - - -
67. CACHD1 ENSDARG00000061590 1287 1.63 - - - - - 0.909 - 0.721 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
68. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.629 - - - 0.831 - - - 0.798 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
69. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.627 - - - - - 0.907 0.720 - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
70. dnmt3ab ENSDARG00000015566 1206 1.618 - 0.801 - - - 0.817 - - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
71. casc5 1487 1.61 - - - - - 0.875 - - 0.735 cancer susceptibility candidate 5, transcript variant X3
72. C24H17orf96 C24H17orf96 1538 1.605 - 0.805 - - - - - - 0.800
73. mrpl20 ENSDARG00000090462 791 1.604 - 0.731 - 0.873 - - - - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
74. eif2s1a ENSDARG00000005827 5992 1.596 - - - - - 0.767 - - 0.829 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
75. ttk ENSDARG00000041361 3911 1.593 - - - - - 0.786 0.807 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
76. RBM33 RBM33 1954 1.592 - - - 0.862 - - - - 0.730
77. hnrnpm ENSDARG00000061735 19428 1.584 - - 0.873 - - - - - 0.711 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
78. CABZ01080568.2 CABZ01080568.2 2137 1.584 - - - - - - 0.776 - 0.808
79. rtca ENSDARG00000002215 3558 1.58 - 0.792 - - - - - - 0.788 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
80. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.58 - - - - - 0.852 - 0.728 - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
81. dvl2 ENSDARG00000056184 1525 1.577 - - - - - 0.867 - - 0.710 dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
82. mrpl48 ENSDARG00000035167 1008 1.577 - - - - - 0.862 0.715 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
83. chtopa ENSDARG00000057234 3287 1.576 - 0.843 - - - 0.733 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
84. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.576 - - - - - 0.850 - - 0.726 histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
85. nr2f2 ENSDARG00000040926 5213 1.575 - - 0.809 - - - 0.766 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
86. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.574 - - - 0.722 - 0.852 - - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
87. SNRPG ENSDARG00000099667 18697 1.57 - - 0.820 - - - - - 0.750 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
88. cdc34b ENSDARG00000012627 3879 1.567 - - - - - 0.856 0.711 - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
89. ankrd12 ENSDARG00000052419 2579 1.565 - - - - - - 0.754 - 0.811 ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
90. fgfbp1 fgfbp1 445 1.565 - 0.702 - - - 0.863 - - -
91. dpysl3 ENSDARG00000002587 4381 1.565 - 0.854 - - - - - - 0.711 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
92. sly1 sly1 2403 1.557 - - - 0.782 - 0.775 - - -
93. taf5l ENSDARG00000025808 556 1.555 - 0.822 - - - - - - 0.733 TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
94. g2e3 ENSDARG00000001313 1485 1.554 - - - - - 0.757 0.797 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
95. tmem151b tmem151b 442 1.554 - - - 0.815 - - - - 0.739
96. gnai2b ENSDARG00000017294 686 1.549 0.700 - - - - 0.849 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
97. bcl2_1 bcl2_1 1185 1.547 - - - - - 0.781 0.766 - -
98. foxp1b ENSDARG00000014181 2594 1.547 - - - - - - 0.817 - 0.730 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
99. rnpc3 ENSDARG00000011247 778 1.545 - - - 0.834 - - 0.711 - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
100. WAPAL WAPAL 1888 1.545 - - - - - - 0.795 - 0.750

There are 2037 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA