Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for matr3l1.1

Gene Name Gene ID Reads Annotation
matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]










Genes with expression patterns similar to matr3l1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
2. HNRNPA2B1 HNRNPA2B1 14997 2.644 - 0.965 - - - - 0.705 - 0.974
3. atp2b4 5891 2.552 - 0.931 - - - 0.758 0.863 - - ATPase, Ca++ transporting, plasma membrane 4
4. max ENSDARG00000024844 6035 2.545 - 0.983 - - 0.841 - 0.721 - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
5. gsk3b ENSDARG00000017803 3438 2.457 - 0.979 - - 0.772 0.706 - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
6. tmpoa ENSDARG00000007315 3638 2.436 - 0.993 - - - 0.701 0.742 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
7. nucks1a ENSDARG00000078473 28285 2.349 - - 0.704 - - 0.714 - - 0.931 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
8. smc1al ENSDARG00000058203 8838 2.339 0.761 - - - - 0.852 0.726 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
9. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 2.312 - - - - 0.800 0.719 0.793 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
10. ppig ENSDARG00000044431 3427 2.223 - - 0.701 - 0.783 - 0.739 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
11. CREBZF ENSDARG00000089787 4261 2.165 - - 0.723 - - 0.718 0.724 - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
12. eif3ha ENSDARG00000102452 9238 1.96 - 0.962 - - - - - - 0.998 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
13. smarce1 ENSDARG00000016871 9628 1.832 - 0.986 - - - 0.846 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
14. ddx42 ENSDARG00000037928 1659 1.832 - 0.994 - - 0.838 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
15. wu:fb54a03 wu:fb54a03 1722 1.811 - 0.994 - - 0.817 - - - -
16. psmd11a ENSDARG00000060150 4529 1.808 - 0.989 - - - - 0.819 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
17. h2afy2_1 ENSDARG00000087897 9887 1.801 - - - - - - 0.807 - 0.994 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
18. ube2f ENSDARG00000025754 1946 1.791 - 0.994 - - 0.797 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
19. fhdc1 ENSDARG00000074812 934 1.769 - 0.992 - - 0.777 - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
20. nhp2 ENSDARG00000069422 9925 1.761 - - - - - - 0.762 - 0.999 NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
21. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.755 - 0.975 - - 0.780 - - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
22. atf6 ENSDARG00000012656 3873 1.745 - 0.992 - - - 0.753 - - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
23. cks1b ENSDARG00000007971 2739 1.73 - 0.993 - - - - 0.737 - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
24. pdcd5 ENSDARG00000026072 3135 1.728 - 0.992 - - - 0.736 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
25. samm50l ENSDARG00000039681 2465 1.721 - 0.992 - - - - 0.729 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
26. ezrb ENSDARG00000025091 2861 1.719 - 0.983 - - - - 0.736 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
27. tes ENSDARG00000051857 2020 1.71 - 0.995 - - - 0.715 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
28. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.708 - 0.994 - - - 0.714 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
29. BX511086.1 BX511086.1 8308 1.706 - - - - - 0.726 - - 0.980
30. rsu1 ENSDARG00000102885 3604 1.706 - 0.988 - - - - 0.718 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
31. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.703 - - - - 0.860 - 0.843 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
32. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.698 - - - - - - 0.705 - 0.993 histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
33. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.68 - 0.969 - - - - 0.711 - - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
34. acin1a ENSDARG00000054290 14023 1.676 - 0.948 - - - - 0.728 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
35. rtf1 ENSDARG00000008947 6596 1.673 - - - - 0.880 0.793 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
36. kdm5c ENSDARG00000006124 4389 1.673 - - - - 0.849 0.824 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
37. st13 ENSDARG00000021973 7787 1.668 - 0.833 - - - - 0.835 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
38. zswim5 ENSDARG00000055900 4243 1.657 - - - - 0.852 0.805 - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
39. fabp3 ENSDARG00000023290 98860 1.657 0.723 - - - - - - - 0.934 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. abcf2a ENSDARG00000038785 2065 1.647 - - - - 0.869 - - 0.778 - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
41. tsc22d2 ENSDARG00000041839 1109 1.634 - 0.931 - - - - 0.703 - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
42. MON1B_1 MON1B_1 697 1.622 - - - - 0.808 - 0.814 - -
43. zfand3 ENSDARG00000052833 2682 1.613 - - - - 0.783 - - 0.830 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
44. C8H5orf51 C8H5orf51 1199 1.608 - - - - 0.806 0.802 - - -
45. sart1 ENSDARG00000005945 1832 1.608 - - - - 0.867 0.741 - - - SART1, U4/U6.U5 tri-snRNP-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-422]
46. pfn2l ENSDARG00000012682 21690 1.607 0.851 - - - - - 0.756 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
47. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.6 - - - - - 0.814 0.786 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
48. rps25 ENSDARG00000041811 52182 1.596 0.720 - - - - - - - 0.876 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
49. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 1.591 0.743 - - - - - - - 0.848 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
50. dut ENSDARG00000106529 3120 1.57 - - - - 0.793 - - 0.777 - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
51. camlg ENSDARG00000100409 2157 1.568 - - - - 0.858 0.710 - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
52. paf1 ENSDARG00000098432 1806 1.567 - - - - 0.827 - - 0.740 - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
53. tdg tdg 3269 1.564 - - - - - 0.803 0.761 - -
54. RNF38 ENSDARG00000062055 3901 1.563 - - - - - 0.831 0.732 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
55. taf11 ENSDARG00000037855 2624 1.556 - - - - - 0.735 0.821 - - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
56. skia ENSDARG00000042151 1850 1.553 - - - - 0.812 - 0.741 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
57. nckap5l ENSDARG00000079148 4227 1.55 - - - - 0.804 - 0.746 - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
58. fam53b ENSDARG00000016156 2143 1.55 - - - - 0.823 - 0.727 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
59. polr3e ENSDARG00000037358 1864 1.55 - - - - 0.831 - 0.719 - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
60. ZNF337_25 ZNF337_25 1713 1.55 - - - - 0.848 - 0.702 - -
61. wdr59 ENSDARG00000088817 1005 1.545 - - - - 0.793 0.752 - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
62. ccnf ENSDARG00000105046 1790 1.544 - - - - 0.797 - 0.747 - - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
63. psmb3 ENSDARG00000013938 10744 1.541 - 0.837 - - - 0.704 - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
64. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.54 0.703 - - - 0.837 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
65. rbx1 ENSDARG00000038030 14611 1.539 - 0.826 - - - 0.713 - - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
66. cuedc1b ENSDARG00000054748 1638 1.534 0.738 - - - - 0.796 - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
67. TNRC6B ENSDARG00000074161 2464 1.534 - - - - 0.817 - 0.717 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
68. tp53rk ENSDARG00000112667 806 1.532 - - - - 0.824 - 0.708 - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
69. pl10 pl10 10795 1.531 - - - - - 0.787 0.744 - -
70. seta ENSDARG00000031495 39977 1.525 - - - - - 0.701 - - 0.824 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
71. zgc:153440 zgc:153440 1444 1.525 - - - - 0.816 - 0.709 - -
72. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.523 - - - - - 0.702 0.821 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
73. foxp4 ENSDARG00000076120 9458 1.516 0.814 - - - - 0.702 - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
74. tmem222a ENSDARG00000069589 1766 1.515 - - - - - 0.745 - 0.770 - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
75. LPHN2 LPHN2 1971 1.513 - - - - 0.775 - 0.738 - -
76. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 1.506 0.704 - - - 0.802 - - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
77. tomm5 ENSDARG00000068265 11813 1.503 - 0.709 - - 0.794 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
78. eif3ea ENSDARG00000090697 14670 1.499 - - - - 0.761 - 0.738 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
79. ptenb ENSDARG00000056623 5783 1.495 - - - - - 0.749 0.746 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
80. rspry1 ENSDARG00000062558 1424 1.487 - - - - 0.749 - 0.738 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
81. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.485 0.724 - - - 0.761 - - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
82. smek1 ENSDARG00000042187 3509 1.48 - - 0.747 - - - 0.733 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
83. slc45a2 ENSDARG00000002593, ENSDARG00000111365 776 1.479 0.725 - - - 0.754 - - - - solute carrier family 45, member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-97]
84. senp3b ENSDARG00000056741 1296 1.476 0.719 - - - - 0.757 - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
85. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.474 - - - - - 0.708 0.766 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
86. TNKS TNKS 2775 1.469 - - - - - 0.712 0.757 - -
87. cbx5 ENSDARG00000061187 24026 1.468 - - - - - 0.742 0.726 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
88. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.467 - - - - 0.746 - 0.721 - -
89. stip1 ENSDARG00000004906 7742 1.464 0.764 - - - - - 0.700 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
90. wdr5 ENSDARG00000016903 4834 1.461 0.725 - 0.736 - - - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
91. uhrf1 ENSDARG00000103409 3282 1.46 0.710 - - - - 0.750 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
92. wdfy1 ENSDARG00000005425 3628 1.459 - - - - 0.741 0.718 - - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
93. ZNF70_2 ZNF70_2 1866 1.452 0.744 - - - - - 0.708 - -
94. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.447 - - 0.737 - - 0.710 - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
95. prmt1 ENSDARG00000010246 11311 1.446 0.704 - - - - - 0.742 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
96. MSL1_1 MSL1_1 2365 1.443 - - - - 0.738 - 0.705 - -
97. rbb4l ENSDARG00000015208 5542 1.442 - - - - - - 0.705 0.737 - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
98. CU915738.1 CU915738.1 3723 1.44 - 0.713 - - 0.727 - - - -
99. znf346 ENSDARG00000060695 3942 1.439 0.723 - - - - - 0.716 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
100. crebbpa ENSDARG00000104609 1739 1.435 - - - - - 0.707 0.728 - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]

There are 1249 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA