Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for matn4

Gene Name Gene ID Reads Annotation
matn4 ENSDARG00000015947 10967 matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]










Genes with expression patterns similar to matn4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. matn4 ENSDARG00000015947 10967 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
2. si:dkeyp-12a9.5 3058 2.684 0.870 0.963 - - - - 0.851 - - si:dkeyp-12a9.5
3. pvalb4 ENSDARG00000024433 35736 2.538 0.706 0.993 - - - - 0.839 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
4. si:dkey-181m9.5 si:dkey-181m9.5 1079 2.486 0.714 0.988 - - - - 0.784 - -
5. si:dkeyp-118a3.2 ENSDARG00000086957 2106 2.301 0.826 - - 0.747 - - 0.728 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
6. nexn ENSDARG00000057317 10972 2.278 0.738 - 0.713 - - - 0.827 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
7. PTGES3L PTGES3L 4801 2.164 0.749 - - 0.708 - - 0.707 - -
8. si:ch211-286b5.5 ENSDARG00000096661 3136 1.834 - 0.989 - - - 0.845 - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
9. mir205 2147 1.826 - 0.986 - - - 0.840 - - - microRNA 205
10. ppapdc3 ppapdc3 4924 1.804 - 0.993 - - - - 0.811 - -
11. cox6a1 ENSDARG00000022438 18811 1.8 - 0.992 - - - - 0.808 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
12. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.786 - 0.993 - - 0.793 - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
13. col9a3 ENSDARG00000037845 6564 1.78 0.912 - - - - - 0.868 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
14. cav3 ENSDARG00000024141 14906 1.772 - - - - - 0.902 0.870 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
15. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.76 - 0.959 - - - - 0.801 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
16. col11a2 ENSDARG00000012422 3204 1.75 0.885 - - - - - 0.865 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
17. acsl1 acsl1 4216 1.745 - 0.993 - - - - 0.752 - -
18. nxf1 ENSDARG00000055076 3251 1.739 - 0.981 - - 0.758 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
19. smyd1a ENSDARG00000009280 1503 1.733 - 0.929 - - - - 0.804 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
20. CABZ01044297.1 CABZ01044297.1 2015 1.733 0.871 - - - - - 0.862 - -
21. tgfbi ENSDARG00000071586 17779 1.716 0.809 - - - - - 0.907 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
22. znf106a ENSDARG00000016651 6049 1.708 - - - - - 0.914 0.794 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
23. klhl40b ENSDARG00000019125 3633 1.708 - - - 0.827 - 0.881 - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
24. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.705 - 0.997 - - - - 0.708 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
25. twf2a ENSDARG00000094792 687 1.703 - 0.989 - - - - 0.714 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
26. sox6 ENSDARG00000015536 7728 1.7 - 0.975 - - - - 0.725 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
27. plod2 ENSDARG00000011821 1656 1.697 0.811 - - - - - 0.886 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
28. epyc ENSDARG00000056950 7783 1.696 0.838 - - - - - 0.858 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
29. myoz1b ENSDARG00000071445 13381 1.696 0.702 0.994 - - - - - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
30. PAQR4 PAQR4 2150 1.695 0.844 - - - - - 0.851 - -
31. ntd5 ENSDARG00000040944 4988 1.692 0.839 - - - - - 0.853 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
32. sgcb ENSDARG00000052341 4168 1.681 - - - - - 0.894 0.787 - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
33. pacsin3 ENSDARG00000099339 4668 1.669 - - - - 0.802 0.867 - - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
34. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1.669 0.853 - - - - - 0.816 - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
35. vwde ENSDARG00000103443 5758 1.663 - - - 0.779 - - 0.884 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
36. mef2cb ENSDARG00000009418 1124 1.662 - - - - - 0.849 0.813 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
37. eno3 ENSDARG00000039007 11355 1.661 - - - - - 0.898 0.763 - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
38. atp5g3a 9539 1.66 - - - - 0.777 - 0.883 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
39. ntla ntla 926 1.644 0.851 - - - - - 0.793 - -
40. tmem161a ENSDARG00000012790 16094 1.644 - - - - - 0.910 0.734 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
41. ndufab1b ENSDARG00000014915 12796 1.641 - - - - 0.809 - 0.832 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
42. lima1 lima1 4760 1.637 - - - - 0.813 0.824 - - -
43. col9a2 ENSDARG00000024492 20234 1.631 0.884 - 0.747 - - - - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
44. dldh ENSDARG00000008785 15202 1.631 - - - - - 0.868 0.763 - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
45. txnipb ENSDARG00000070000 2365 1.617 - - - 0.796 - - 0.821 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
46. acana ENSDARG00000035891 118 1.616 0.821 - - - - - 0.795 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
47. eprs ENSDARG00000060494 4729 1.61 - - - - - 0.868 0.742 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
48. larp1b ENSDARG00000061169 9939 1.61 - - - - - 0.866 0.744 - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
49. myhc4 ENSDARG00000035438 1322 1.603 0.758 - - - - - 0.845 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
50. tgm2a ENSDARG00000070157 4516 1.599 0.730 - - - - - 0.869 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
51. zgc:66479 ENSDARG00000008732 3347 1.598 - - - - - 0.862 0.736 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
52. smtnl1 ENSDARG00000041257 7410 1.597 0.759 - - - - - 0.838 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
53. sdhdb ENSDARG00000030139 9761 1.597 - - - - 0.756 - 0.841 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
54. BX470254.1 ENSDARG00000097402 1389 1.594 0.766 - - - - - 0.828 - -
55. nuf2 ENSDARG00000034624 2252 1.59 - - - - 0.754 0.836 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
56. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.586 - 0.815 - - - 0.771 - - - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
57. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.583 - - 0.774 - - - 0.809 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
58. myhz2 ENSDARG00000012944 69921 1.583 0.702 - - - - - 0.881 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
59. notum2 ENSDARG00000088411 823 1.576 0.816 - - - - - 0.760 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
60. CABZ01079764.1 CABZ01079764.1 12103 1.574 0.799 - - - - - 0.775 - -
61. PLXDC2 ENSDARG00000059950 220 1.569 0.821 - - - - - 0.748 - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
62. dars ENSDARG00000070043 6854 1.569 - - - - 0.768 - 0.801 - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
63. cd9b ENSDARG00000016691 15573 1.566 - - - - 0.844 0.722 - - - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
64. casq2 ENSDARG00000008982 21802 1.566 0.703 - - - - 0.863 - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
65. ppm1bb ENSDARG00000011496 10196 1.565 - 0.821 - - 0.744 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
66. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.564 - 0.823 - - - - 0.741 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
67. CR392006.1 CR392006.1 1401 1.564 0.774 - - - - - 0.790 - -
68. smpx ENSDARG00000045302 2175 1.564 - - - 0.732 - - 0.832 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
69. EHBP1L1 EHBP1L1 2500 1.56 0.737 - - - - - 0.823 - -
70. eng1b eng1b 2544 1.559 - - - - 0.787 - 0.772 - -
71. sptb ENSDARG00000030490 7128 1.558 0.701 - - - - - 0.857 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
72. klhl41b ENSDARG00000006757 10762 1.555 - - 0.741 - - - 0.814 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
73. ppm1la ENSDARG00000063218 2142 1.554 - - - - - 0.848 0.706 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
74. CR354540.2 ENSDARG00000117517 18452 1.553 0.744 - - - - - 0.809 - -
75. murcb murcb 13655 1.553 0.746 - - - - - 0.807 - -
76. TMPO TMPO 3264 1.552 - - - 0.727 - - 0.825 - -
77. DNAJA4 ENSDARG00000051762 5657 1.55 - - 0.722 - - - 0.828 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
78. trdn ENSDARG00000041779 4283 1.548 0.728 - - - - - 0.820 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
79. IGSF10 ENSDARG00000077497 317 1.548 0.747 - - - - - 0.801 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
80. pygma ENSDARG00000055518 15972 1.548 0.703 - - - - - 0.845 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
81. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.547 - 0.840 0.707 - - - - - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
82. slc2a15b ENSDARG00000053269 899 1.537 - - - - 0.786 - 0.751 - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
83. rps19 ENSDARG00000030602 77975 1.532 - 0.758 - - - 0.774 - - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
84. sh3bgr ENSDARG00000021633 3498 1.531 0.719 - - - - - 0.812 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
85. myoz2b ENSDARG00000037266 2139 1.531 0.724 - - - - - 0.807 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
86. eng1a eng1a 484 1.53 0.782 - - - - - 0.748 - -
87. rpl7 ENSDARG00000007320 81359 1.527 - - - - - 0.759 0.768 - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. cmya5 ENSDARG00000061379 1423 1.527 0.726 - - - - - 0.801 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
89. pdhb ENSDARG00000021346 9088 1.527 - - - - 0.814 - 0.713 - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
90. col9a1 col9a1 34481 1.524 0.746 - 0.778 - - - - - -
91. fermt2 ENSDARG00000020242 9351 1.522 - - - - 0.758 - 0.764 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
92. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.52 - 0.806 - - - 0.714 - - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
93. si:ch211-156j16.1 ENSDARG00000092035 7441 1.519 0.726 - - - - - 0.793 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
94. pi15a ENSDARG00000045378 2361 1.518 0.740 - - - - - 0.778 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
95. usp28 ENSDARG00000008880 1850 1.515 0.711 - - - - - 0.804 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
96. zgc:153662 zgc:153662 4604 1.509 - - 0.714 - - - 0.795 - -
97. anxa6 ENSDARG00000013335 3588 1.498 - - - 0.789 - - 0.709 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
98. golim4b ENSDARG00000014545 628 1.495 0.712 - - - - - 0.783 - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
99. nkx3.2 ENSDARG00000037639 575 1.486 0.722 - - - - - 0.764 - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
100. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.482 - - - 0.707 - - 0.775 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]

There are 935 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA