Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for matn3b

Gene Name Gene ID Reads Annotation
matn3b ENSDARG00000069265 856 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]










Genes with expression patterns similar to matn3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. matn3b ENSDARG00000069265 856 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
2. CABZ01044297.1 CABZ01044297.1 2015 3.53 - 0.873 - - - 0.947 0.956 0.754 -
3. col9a3 ENSDARG00000037845 6564 3.493 0.739 0.888 - - - 0.913 0.953 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
4. mef2cb ENSDARG00000009418 1124 3.227 0.723 0.769 - - - - 0.744 - 0.991 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
5. BX470254.1 ENSDARG00000097402 1389 3.182 0.772 0.779 - - - 0.790 0.841 - -
6. usp28 ENSDARG00000008880 1850 3.111 0.748 0.814 - - - - 0.820 0.729 - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
7. epyc ENSDARG00000056950 7783 2.781 - 0.897 - - - 0.951 0.933 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
8. ntla ntla 926 2.626 - 0.827 - - - 0.949 0.850 - -
9. PAQR4 PAQR4 2150 2.62 - 0.785 - - - 0.921 0.914 - -
10. col27a1a 1747 2.592 - 0.789 - - - 0.928 0.875 - - collagen, type XXVII, alpha 1a
11. plcl1 ENSDARG00000067676 2457 2.587 - 0.918 - - - 0.891 0.778 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
12. pi15a ENSDARG00000045378 2361 2.562 - 0.804 - - - 0.856 0.902 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
13. PLXDC2 ENSDARG00000059950 220 2.544 - 0.753 - - - 0.823 0.968 - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
14. COBLL1_1 COBLL1_1 787 2.508 - 0.761 - - - 0.878 0.869 - -
15. IGSF10 ENSDARG00000077497 317 2.489 - 0.753 - - - 0.886 0.850 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
16. ntd5 ENSDARG00000040944 4988 2.475 - 0.748 - - - 0.867 0.860 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
17. si:dkeyp-118a3.2 ENSDARG00000086957 2106 2.472 - 0.894 - - - 0.776 0.802 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
18. CU972452.1 CU972452.1 1046 2.469 - 0.759 - - - 0.806 0.904 - -
19. CABZ01079764.1 CABZ01079764.1 12103 2.466 - 0.783 - - - 0.873 0.810 - -
20. tgfbi ENSDARG00000071586 17779 2.457 0.714 - - - - 0.904 0.839 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
21. mmp23bb ENSDARG00000009825 133 2.445 - 0.719 - - - 0.925 0.801 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
22. CR847510.1 CR847510.1 629 2.435 - 0.830 - - - 0.777 0.828 - -
23. sncga ENSDARG00000034423, ENSDARG00000112260 5469 2.429 - 0.810 - - - 0.815 0.804 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
24. susd5 ENSDARG00000088277 439 2.424 - 0.791 - - - 0.909 0.724 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
25. tppp3 ENSDARG00000030463 992 2.423 - 0.745 - - - 0.894 0.784 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
26. myhc4 ENSDARG00000035438 1322 2.414 0.780 0.848 - - - - 0.786 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
27. BX842614.2 BX842614.2 799 2.408 - 0.790 - - - 0.877 0.741 - -
28. selm 2395 2.398 - - - - - 0.751 0.723 - 0.924 selenoprotein M
29. TMPO TMPO 3264 2.397 - 0.731 - - - - 0.754 - 0.912
30. hnmt ENSDARG00000012796 302 2.391 0.703 0.810 - 0.878 - - - - - histamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040801-157]
31. STRIP2 ENSDARG00000059003 394 2.345 0.719 0.780 - 0.846 - - - - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
32. CABZ01026370.1 CABZ01026370.1 286 2.326 - 0.732 - - - 0.724 0.870 - -
33. ryr3 ENSDARG00000071331 6795 2.29 - 0.779 - - - 0.740 0.771 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
34. CU633479.5 ENSDARG00000114818 1815 2.28 - 0.701 - 0.750 - - 0.829 - -
35. sptb ENSDARG00000030490 7128 2.263 - 0.729 - - - 0.728 0.806 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
36. cldn5b ENSDARG00000014059 654 2.249 0.742 0.803 - 0.704 - - - - - claudin 5b [Source:ZFIN;Acc:ZDB-GENE-041010-140]
37. mxra8a ENSDARG00000062222 530 2.221 - 0.795 - - - 0.716 0.710 - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
38. srpk3 ENSDARG00000005916 1546 2.217 0.753 0.756 - - - - 0.708 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
39. plod2 ENSDARG00000011821 1656 1.831 - - - - - 0.928 0.903 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
40. chad ENSDARG00000045071 903 1.83 - - - - - 0.941 0.889 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
41. si:dkey-6n6.1 ENSDARG00000062487 222 1.83 - - - - - 0.892 0.938 - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
42. col11a2 ENSDARG00000012422 3204 1.823 - 0.904 - - - - 0.919 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
43. si:dkeyp-12a9.5 3058 1.817 - - - - - 0.919 0.898 - - si:dkeyp-12a9.5
44. SURF2 ENSDARG00000112476 592 1.817 - 0.827 - - - - - - 0.990 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
45. acana ENSDARG00000035891 118 1.807 - - - - - 0.939 0.868 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
46. loxl1 ENSDARG00000054451 2485 1.783 - 0.826 - - - 0.957 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
47. nol10 ENSDARG00000020077 984 1.77 - - - 0.783 - - - - 0.987 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
48. ift57 ENSDARG00000021022 288 1.761 - 0.846 - 0.915 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
49. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.754 - 0.790 - - - - - - 0.964 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
50. bcl9 ENSDARG00000036687 1124 1.74 - 0.760 - - - - - - 0.980 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
51. clu ENSDARG00000010434 498 1.727 - 0.857 - - - 0.870 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
52. im:7136729 im:7136729 1625 1.727 - - - 0.747 - - - - 0.980
53. etv2 ENSDARG00000053868 715 1.725 - - - 0.734 - - - - 0.991 ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
54. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.723 - - - 0.736 - - - - 0.987 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
55. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.715 - - - 0.733 - - - - 0.982 exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
56. lepre1 lepre1 5346 1.709 - - - 0.798 - - - - 0.911
57. srpx ENSDARG00000010318 946 1.7 - - - 0.899 - - 0.801 - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
58. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.692 - 0.753 - - - - - - 0.939 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
59. slc2a15a ENSDARG00000029894 2674 1.691 - 0.708 - - - - - - 0.983 solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
60. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.69 - 0.835 - - - - 0.855 - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
61. asphd2 ENSDARG00000059629 1005 1.688 - - - 0.703 - - - - 0.985 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
62. ltbp3 325 1.68 - 0.904 - - - - 0.776 - - latent transforming growth factor beta binding protein 3, transcript variant X3
63. C12H10orf71 C12H10orf71 595 1.675 - - - 0.911 - 0.764 - - -
64. ucmab ENSDARG00000005485 1808 1.673 - 0.747 - - - 0.926 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
65. CABZ01086825.1 CABZ01086825.1 573 1.672 - 0.820 - - - - 0.852 - -
66. tgfb3 ENSDARG00000019367 2327 1.669 - - - - - 0.924 0.745 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
67. mybpc2b ENSDARG00000021265 9618 1.661 - 0.898 - - - - 0.763 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
68. tnnt2d ENSDARG00000002988 7590 1.641 - 0.816 - - - - 0.825 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
69. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.633 - - - - - - 0.755 - 0.878 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
70. BRK1 ENSDARG00000041974 6430 1.632 - - - 0.744 - - - - 0.888 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
71. gpr146 ENSDARG00000059610 810 1.63 - 0.734 - 0.896 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
72. nubpl ENSDARG00000054821 232 1.628 - 0.765 - 0.863 - - - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
73. si:ch211-85n16.3 ENSDARG00000096346 1095 1.628 - - - 0.793 - - - - 0.835 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
74. fam46bb 601 1.626 - - - - - 0.821 0.805 - - family with sequence similarity 46, member Bb
75. prx ENSDARG00000017246 6183 1.618 - 0.861 - - - - 0.757 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
76. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.618 0.759 0.859 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
77. BX530018.3 ENSDARG00000107022 614 1.615 - 0.888 - - - - 0.727 - -
78. pygma ENSDARG00000055518 15972 1.615 - 0.868 - - - - 0.747 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
79. golim4b ENSDARG00000014545 628 1.606 - - - 0.751 - - 0.855 - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
80. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.604 - 0.829 - - - - 0.775 - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
81. NTN5 ENSDARG00000036422 371 1.603 0.781 - - - - - 0.822 - - netrin 5 [Source:ZFIN;Acc:ZDB-GENE-130530-593]
82. vwde ENSDARG00000103443 5758 1.6 - - - - - - 0.824 - 0.776 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
83. zgc:153662 zgc:153662 4604 1.598 - 0.798 - - - - 0.800 - -
84. ICT1 356 1.597 - - - 0.836 - 0.761 - - - immature colon carcinoma transcript 1
85. ism1 ENSDARG00000020541 1241 1.594 - 0.758 - - - 0.836 - - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
86. apc ENSDARG00000058868 2605 1.588 - 0.715 - - - - - - 0.873 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
87. C13H10orf71 3489 1.588 - 0.787 - - - - 0.801 - - chromosome 13 C10orf71 homolog
88. TENC1 TENC1 1729 1.587 - 0.840 - - - - 0.747 - -
89. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.585 - 0.869 - - - - 0.716 - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
90. tbx15 ENSDARG00000002582 755 1.583 0.779 - - - - - 0.804 - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
91. ryr1b ENSDARG00000023797 5693 1.583 - 0.773 - - - - 0.810 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
92. GJD4 ENSDARG00000116895 139 1.581 - 0.813 - - - 0.768 - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
93. slc6a8 ENSDARG00000043646 1114 1.575 0.734 - - - - - 0.841 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
94. CU302436.1 ENSDARG00000114500 1619 1.572 - 0.770 - - - - 0.802 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
95. hspb6 ENSDARG00000077236 209 1.572 0.768 - - - - - 0.804 - - heat shock protein, alpha-crystallin-related, b6 [Source:ZFIN;Acc:ZDB-GENE-080214-7]
96. trim55b ENSDARG00000058158 586 1.57 - 0.825 - - - - 0.745 - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
97. tnw 16679 1.568 - 0.787 - - - - 0.781 - - tenascin W, transcript variant X2
98. nmrk2 ENSDARG00000067848 10293 1.564 - 0.832 - - - - 0.732 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
99. hspb11 ENSDARG00000002204 879 1.562 - 0.851 - - - - 0.711 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
100. MUSTN1 MUSTN1 1882 1.561 - 0.780 - - - - 0.781 - -

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA