Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mark3

Gene Name Gene ID Reads Annotation
mark3 mark3 1375










Genes with expression patterns similar to mark3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mark3 mark3 1375 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cetn4 ENSDARG00000041215 898 2.551 - - - - - - 0.747 0.829 0.975 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
3. aacs ENSDARG00000012468 1138 1.954 0.994 - - - - - - - 0.960 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
4. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.946 0.987 - - - - - - - 0.959 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
5. xpot ENSDARG00000099652 3026 1.927 0.975 - - - - - - - 0.952 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
6. tead3a ENSDARG00000074321 2240 1.916 0.991 - - - - - - - 0.925 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
7. reep3 reep3 2536 1.897 0.980 - - - - - - - 0.917
8. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 1.883 0.989 0.894 - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
9. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.881 0.986 - - - - - - - 0.895 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
10. myeov2 3351 1.88 0.978 - - - - - - - 0.902 myeloma overexpressed 2
11. spry4 ENSDARG00000068732 2091 1.869 0.975 0.894 - - - - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
12. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.854 0.962 - - - - - - - 0.892 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
13. sdr16c5a ENSDARG00000016233 2413 1.848 0.953 - - - - - - - 0.895 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
14. GIT1 ENSDARG00000039489 1157 1.834 0.987 0.847 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
15. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.828 - 0.866 - - - - - - 0.962 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
16. uck2b ENSDARG00000022213 1542 1.817 - 0.852 - - - - - - 0.965 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
17. NAIF1 ENSDARG00000062753 696 1.816 - 0.852 - - - - - - 0.964 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
18. rqcd1 2301 1.802 - 0.828 - - - - - - 0.974 RCD1 required for cell differentiation1 homolog (S. pombe)
19. siah1 ENSDARG00000030871 1590 1.802 - 0.868 - - - - - - 0.934 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
20. pcnp ENSDARG00000037713 2754 1.79 - 0.900 - - - - - - 0.890 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
21. ctbp2 ctbp2 3255 1.78 0.930 - - - - - - - 0.850
22. e2f8 ENSDARG00000057323 1432 1.773 0.956 0.817 - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
23. map3k7 ENSDARG00000020469 2845 1.768 - 0.841 - - - - - - 0.927 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
24. ypel3 ENSDARG00000055510 1344 1.765 - - - - - - - 0.804 0.961 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
25. KIAA0355 3250 1.763 - 0.871 - - - - - - 0.892 KIAA0355 ortholog, transcript variant X1
26. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.757 - 0.834 - - - - - - 0.923 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
27. snai2 ENSDARG00000040046 2415 1.755 0.988 - - - - - - - 0.767 snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
28. TP53BP1 ENSDARG00000079000 997 1.753 - 0.782 - - - - - - 0.971 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
29. nucb1 ENSDARG00000054833 2009 1.749 - 0.781 - - - - - - 0.968 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
30. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.746 0.970 0.776 - - - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
31. etnppl ENSDARG00000035544 440 1.745 0.991 - - - - - 0.754 - - ethanolamine-phosphate phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1133]
32. spata13 ENSDARG00000062837 5330 1.743 0.982 - - - - - - 0.761 - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
33. ARHGEF15 ENSDARG00000100293 553 1.743 - 0.790 - - - - - - 0.953 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
34. capn5a ENSDARG00000103317 1923 1.734 0.969 0.765 - - - - - - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
35. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.728 - - - - - - - 0.759 0.969 SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
36. TMEM218 ENSDARG00000027129 716 1.708 - - - - - - 0.738 - 0.970 transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
37. cnpy1 ENSDARG00000003757 1132 1.706 - 0.756 - - - - - - 0.950 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
38. ssr2 ENSDARG00000005230 31940 1.706 0.822 - - - - - - - 0.884 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
39. tram2 ENSDARG00000030092 1906 1.705 0.941 - - - - - - - 0.764 translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]
40. aurkaip1 ENSDARG00000074985 2214 1.703 0.976 0.727 - - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
41. pgrmc1 ENSDARG00000054172 5423 1.702 0.957 - - - - - 0.745 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
42. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.701 0.983 - - - - - 0.718 - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
43. acadl ENSDARG00000088357, ENSDARG00000115321 1179 1.694 - - - - - - - 0.730 0.964 acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
44. ctsf ENSDARG00000063095 4564 1.691 0.990 - - - - - - - 0.701 cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
45. GCA GCA 5211 1.689 0.917 - - - - - - - 0.772
46. dnajb11 ENSDARG00000015088 1404 1.686 - - - - - - - 0.721 0.965 DnaJ (Hsp40) homolog, subfamily B, member 11 [Source:ZFIN;Acc:ZDB-GENE-031113-9]
47. ptbp2a ENSDARG00000101947 1921 1.678 - - - - - - - 0.732 0.946 polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
48. DALRD3 ENSDARG00000068602 3062 1.677 - - - - - - - 0.748 0.929 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
49. fam60a 825 1.676 - - - - - - - 0.707 0.969 family with sequence similarity 60, member A
50. bcs1l ENSDARG00000012295 664 1.675 - 0.881 - - - - - 0.794 - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
51. chpt1 ENSDARG00000014572 2926 1.673 0.919 - - - - - 0.754 - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
52. chmp2bb ENSDARG00000002190 4629 1.672 0.972 - - - - - 0.700 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
53. AL929222.1 ENSDARG00000096994 1293 1.669 - - - - - 0.726 - - 0.943
54. MCUR1 MCUR1 786 1.665 - - - - - - 0.714 - 0.951
55. SERTAD4 ENSDARG00000089795 791 1.663 - - - - - - 0.716 - 0.947 SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
56. ppp3r1a ENSDARG00000092659 9729 1.66 0.917 - - - - - - 0.743 - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
57. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.656 - 0.858 - - - - - - 0.798 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
58. ptgs2a ENSDARG00000004539 1207 1.645 - 0.751 - - - - - - 0.894 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
59. CLDN23 CLDN23 2002 1.643 0.916 0.727 - - - - - - -
60. zdhhc6 ENSDARG00000075721 1494 1.642 - 0.834 - - - - 0.808 - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
61. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.628 - 0.867 - - - - - 0.761 - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
62. hspb9 ENSDARG00000078674 2755 1.62 - 0.864 - 0.756 - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
63. pou4f1 ENSDARG00000005559 821 1.606 - 0.846 - - - - - 0.760 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
64. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.602 0.889 - - - - - - - 0.713 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
65. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.599 - 0.850 - - - - 0.749 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
66. emilin1b ENSDARG00000026166 1530 1.593 - - - - - - 0.803 - 0.790 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
67. col4a6 ENSDARG00000052061 8636 1.586 0.837 - - - - - - - 0.749 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
68. QPCT ENSDARG00000089717 1383 1.576 0.873 0.703 - - - - - - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
69. CR354611.2 CR354611.2 2040 1.571 - 0.783 - - - - - - 0.788
70. phf21ab ENSDARG00000021378 1706 1.571 - 0.868 - - - 0.703 - - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
71. lsm6 ENSDARG00000036995 4377 1.564 - 0.750 - - - - - - 0.814 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
72. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.56 - - - - - 0.763 - 0.797 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
73. cmah ENSDARG00000057714 852 1.558 - - - - - - 0.756 - 0.802 cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
74. psat1 ENSDARG00000016733 8084 1.557 - 0.834 - - - 0.723 - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
75. zgc:174938_1 ENSDARG00000075622 667 1.557 - 0.772 - - - 0.785 - - - zgc:174938 [Source:ZFIN;Acc:ZDB-GENE-070928-44]
76. thrap3b ENSDARG00000098228 4396 1.557 - 0.831 - - - 0.726 - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
77. b4galt1 ENSDARG00000002634 1076 1.555 - 0.751 - - - - 0.804 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
78. lepr ENSDARG00000070961, ENSDARG00000112744, ENSDARG00000114564 1014 1.546 - 0.842 - - - - 0.704 - - leptin receptor [Source:ZFIN;Acc:ZDB-GENE-080104-1]
79. clic4 ENSDARG00000022995 6064 1.543 - 0.760 - - - - - - 0.783 chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
80. matk ENSDARG00000074670 225 1.542 - 0.821 - - - - 0.721 - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
81. ankrd12 ENSDARG00000052419 2579 1.537 - 0.788 - - - 0.749 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
82. ms4a17a.8 ENSDARG00000043802 362 1.534 - 0.807 - - - - 0.727 - - membrane-spanning 4-domains, subfamily A, member 17A.8 [Source:ZFIN;Acc:ZDB-GENE-070705-365]
83. si:ch211-214b16.4 ENSDARG00000074345 261 1.528 - - - - - - 0.730 0.798 - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
84. usp30 ENSDARG00000056842 178 1.523 - - - - - - 0.713 0.810 - ubiquitin specific peptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060526-335]
85. znf710a ENSDARG00000014680 582 1.512 - 0.739 - - - - - 0.773 - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
86. pnpla7a ENSDARG00000062986 1793 1.512 - 0.798 - - - 0.714 - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
87. erf ENSDARG00000063417 1053 1.51 - 0.783 - - - 0.727 - - - Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
88. CYTH3 CYTH3 589 1.504 - - - 0.733 - - - 0.771 -
89. map3k3 ENSDARG00000060348 1482 1.503 - - - 0.727 - 0.776 - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
90. TUBB8P7 TUBB8P7 1353 1.48 - - - 0.729 - - - 0.751 -
91. tsta3 ENSDARG00000039666 1314 1.471 - 0.724 - - - - - 0.747 - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
92. znf292b ENSDARG00000043973 3791 1.465 - 0.742 - - - 0.723 - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
93. C24H16orf11 C24H16orf11 32 1.462 - - - 0.716 - - 0.746 - -
94. ensaa ENSDARG00000036944 685 1.449 - - - 0.736 - - - 0.713 - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
95. CABZ01062452.1 CABZ01062452.1 1721 1.444 - 0.739 - - - - 0.705 - -
96. sdc3 3788 1.435 - - - - - 0.724 - - 0.711 syndecan 3
97. xkr8.2 ENSDARG00000076820 51 1.433 - - - 0.731 - - 0.702 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
98. zrsr2 ENSDARG00000058448 335 0.996 0.996 - - - - - - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
99. HOMEZ HOMEZ 1824 0.995 0.995 - - - - - - - -
100. poll ENSDARG00000039613 395 0.995 0.995 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]

There are 1601 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA