Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mapre1b

Gene Name Gene ID Reads Annotation
mapre1b ENSDARG00000002659 9119 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]










Genes with expression patterns similar to mapre1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mapre1b ENSDARG00000002659 9119 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
2. creb1a ENSDARG00000053586 5068 3.489 - - 0.962 0.968 - 0.704 - - 0.855 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
3. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 2.889 - 0.989 0.904 - - - 0.996 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
4. SH3BGRL ENSDARG00000058302 4525 2.873 - - 0.920 0.954 - - 0.999 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
5. mapk6 ENSDARG00000032103 6422 2.622 - - - - 0.842 0.781 0.999 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
6. dla ENSDARG00000010791 9281 2.597 - - - 0.966 0.854 - - - 0.777 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
7. fbl ENSDARG00000053912 5891 2.597 - - - - 0.815 - 0.998 - 0.784 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
8. lmnb2 ENSDARG00000101624 11304 2.529 - - 0.866 - 0.890 - - - 0.773 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
9. foxo3b ENSDARG00000042904 5046 2.525 - - 0.939 - 0.786 0.800 - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
10. ncoa5 ENSDARG00000016345 5765 2.497 - - 0.871 - - 0.727 - - 0.899 nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
11. tmem35 ENSDARG00000052567 5685 2.447 - - 0.875 - - 0.750 - - 0.822 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
12. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.447 - - - - - - 0.991 0.706 0.750 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
13. tcea1 ENSDARG00000003531 2912 2.435 - - - - 0.858 - - 0.718 0.859 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
14. nucks1a ENSDARG00000078473 28285 2.403 - - - 0.857 - 0.840 - 0.706 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
15. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.396 - - - - 0.901 0.777 - 0.718 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
16. foxk2 ENSDARG00000030583 2982 2.369 - - - - - 0.833 - 0.772 0.764 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
17. ube2d1b ENSDARG00000038576 5971 2.338 0.740 0.849 - - - - - - 0.749 ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
18. dpysl3 ENSDARG00000002587 4381 2.31 - - - - 0.830 0.747 - - 0.733 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
19. sin3b ENSDARG00000062472 2025 2.293 - - - - - 0.751 - 0.722 0.820 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
20. marcksa ENSDARG00000004049 2518 2.287 - - - - - 0.797 - 0.713 0.777 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
21. her4.3 ENSDARG00000070770 613 2.253 - - - - 0.810 0.740 - - 0.703 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
22. AL844567.1 AL844567.1 1605 2.248 - - - - - 0.744 - 0.712 0.792
23. npm1b ENSDARG00000037675 5448 2.124 - - - - 0.720 - - 0.702 0.702 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
24. si:ch73-110p20.1 5932 1.966 - - - 0.970 - - 0.996 - - si:ch73-110p20.1
25. sub1a ENSDARG00000053446 13383 1.946 - - - 0.953 - - 0.993 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
26. mob3a ENSDARG00000019113 2551 1.94 - 0.973 - 0.967 - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
27. supt16h ENSDARG00000079949 4755 1.939 - - 0.971 0.968 - - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
28. grpel2 ENSDARG00000069421 5673 1.936 - - 0.938 - - - 0.998 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
29. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.923 - - - 0.958 - - 0.965 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
30. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.921 - - 0.923 - - - 0.998 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
31. trappc1 ENSDARG00000039005 6990 1.896 - - 0.921 0.975 - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
32. eppk1 ENSDARG00000096359 4315 1.889 - - 0.932 0.957 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
33. fubp1 ENSDARG00000029248 15259 1.889 - - - - 0.892 - 0.997 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
34. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 1.875 - 0.961 - - - - 0.914 - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
35. scrt2 ENSDARG00000056175 4331 1.838 - - 0.961 - 0.877 - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
36. zgc:109868 zgc:109868 7474 1.833 - 0.888 - 0.945 - - - - -
37. zgc:77262 ENSDARG00000044545 5563 1.822 - - - 0.969 0.853 - - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
38. edf1 ENSDARG00000009950 10518 1.822 - - - - 0.831 - 0.991 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
39. zbtb18 ENSDARG00000028228 3653 1.812 - - - - - - 0.998 - 0.814 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
40. hmgb2b ENSDARG00000053990 11519 1.812 - - - 0.949 - - - - 0.863 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
41. rnaseh2a ENSDARG00000018891 1979 1.811 - 0.972 0.839 - - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
42. zranb2 ENSDARG00000044332 6723 1.804 - - - - - - 0.999 - 0.805 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
43. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.802 - - 0.973 - - - - - 0.829 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
44. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.801 - - - - 0.802 - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
45. med6 ENSDARG00000034734 2711 1.78 - - - - - - 0.999 - 0.781 mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
46. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.779 - - - 0.973 - 0.806 - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
47. lsm14ab ENSDARG00000100553 3837 1.777 - - - 0.972 - 0.805 - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
48. TNRC6C_1 TNRC6C_1 6574 1.775 - - - - - 0.776 0.999 - -
49. lztfl1 ENSDARG00000105010 1697 1.773 - 0.972 - - 0.801 - - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
50. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.771 - 0.959 - - - - 0.812 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
51. hexb ENSDARG00000034368 3505 1.762 - 0.807 - 0.955 - - - - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
52. meis3 ENSDARG00000002795 2509 1.759 - - - 0.958 - 0.801 - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
53. dpy30 ENSDARG00000004427 7112 1.759 - 0.974 - - - - - 0.785 - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
54. emc6 ENSDARG00000035282 4981 1.758 0.794 - - 0.964 - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
55. snrpd3l ENSDARG00000076283 7655 1.757 - 0.894 - - - - - - 0.863 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
56. stmn1a ENSDARG00000004169 21169 1.755 - - - 0.957 - - - - 0.798 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
57. h1fx ENSDARG00000054058 4075 1.75 - - - - - - 0.998 - 0.752 H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
58. hnrnpm ENSDARG00000061735 19428 1.749 - - - - - - 0.978 - 0.771 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
59. HOMEZ HOMEZ 1824 1.744 - 0.972 - - - - - - 0.772
60. ndufa10 ENSDARG00000013333 6597 1.738 - - - 0.963 0.775 - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
61. IM:7163548 IM:7163548 6540 1.735 - 0.973 - - - 0.762 - - -
62. ACVR1B ACVR1B 4824 1.731 - - 0.959 - - - - - 0.772
63. vamp2 ENSDARG00000056877 2158 1.731 - - - - - - 0.998 - 0.733 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
64. lmnb1 ENSDARG00000044299 9817 1.729 - - - 0.958 0.771 - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
65. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.727 - - - 0.808 - - 0.919 - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
66. lgi2a ENSDARG00000111069 965 1.714 - - - - - 0.716 0.998 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
67. nxf1 ENSDARG00000055076 3251 1.713 - 0.966 - - - - - - 0.747 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
68. ctnnb1 ENSDARG00000014571 12004 1.711 - - - - - - 0.995 0.716 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
69. sec61b ENSDARG00000076568 11859 1.707 - 0.913 - 0.794 - - - - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
70. calm1a ENSDARG00000021811 4791 1.707 - 0.972 - - - 0.735 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
71. hp1bp3 ENSDARG00000044669 23708 1.706 - - - 0.911 - 0.795 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
72. prmt1 ENSDARG00000010246 11311 1.704 - - - 0.926 - 0.778 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
73. ide ENSDARG00000075570 4331 1.703 0.903 - - - 0.800 - - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
74. elavl1 11672 1.701 - - - 0.948 - 0.753 - - - ELAV like RNA binding protein 1, transcript variant X3
75. h3f3d ENSDARG00000045248 43757 1.7 - - - - - - 0.986 0.714 - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
76. rbm4.3 ENSDARG00000022129 28571 1.691 - - - - - - 0.954 0.737 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
77. ezh2 ENSDARG00000010571 3273 1.69 - - - - 0.866 - - - 0.824 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
78. syf2 ENSDARG00000004706 2463 1.688 - - - 0.970 - - - - 0.718 SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
79. hmp19 2554 1.687 - 0.973 - - - - - - 0.714 HMP19 protein
80. atad5a ENSDARG00000070568 1840 1.685 0.913 - - - - - - - 0.772 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
81. ranbp1 ENSDARG00000014817 3371 1.681 - - - - 0.836 - - - 0.845 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
82. si:ch211-161h7.4 ENSDARG00000087238 4399 1.679 - - - - 0.882 - - - 0.797 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
83. nin ENSDARG00000060298 1558 1.679 - - - 0.971 - - - - 0.708 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
84. whsc1l1 8544 1.671 - - - - - 0.908 - - 0.763 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
85. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.67 - - - 0.963 - - - - 0.707 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
86. cnn3b ENSDARG00000029856 4807 1.669 - - - - 0.851 - - 0.818 - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
87. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.661 - - 0.843 - 0.818 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
88. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.655 - - - - 0.828 0.827 - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
89. scaf1 ENSDARG00000054010 3752 1.649 0.860 - - - - - - - 0.789 SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
90. pias4a ENSDARG00000007081 4264 1.648 - - 0.946 - - 0.702 - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
91. prpf40a ENSDARG00000058467 6565 1.64 - - - - 0.885 - - - 0.755 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
92. camk2d2 ENSDARG00000014273 2840 1.628 - - 0.913 - - 0.715 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
93. hnrnpul1 ENSDARG00000040564 6550 1.626 - - - 0.804 - - - - 0.822 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
94. tmem135 ENSDARG00000069157 918 1.619 0.840 - - - 0.779 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
95. gpm6ab ENSDARG00000004621 5825 1.616 0.830 - - - - - - - 0.786 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
96. vdac1 ENSDARG00000045132 8051 1.615 - - - 0.813 - 0.802 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
97. eif3s10 ENSDARG00000076815 10822 1.614 - - 0.860 - - - - - 0.754 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
98. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.613 - - - - 0.820 - - - 0.793 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
99. eif2s3 ENSDARG00000008292 17051 1.612 - - 0.857 - 0.755 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
100. ncl ENSDARG00000002710 16951 1.61 - - - 0.794 - - - - 0.816 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]

There are 1489 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA