Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for map1lc3b

Gene Name Gene ID Reads Annotation
map1lc3b ENSDARG00000101127 3958 microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]










Genes with expression patterns similar to map1lc3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. map1lc3b ENSDARG00000101127 3958 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
2. srsf11 ENSDARG00000098574 12801 2.633 0.928 - - - - 0.973 0.732 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
3. pfdn4 ENSDARG00000061228 8266 2.565 0.910 0.895 - - - - 0.760 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
4. ptp4a1 ENSDARG00000006242 10267 2.458 - 0.735 - - - 0.953 0.770 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
5. cfl1 ENSDARG00000021124 78399 2.298 0.719 - - - - 0.801 0.778 - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
6. alcama ENSDARG00000026531, ENSDARG00000116648 6938 2.243 - - - - - 0.752 0.742 - 0.749 activated leukocyte cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-990415-30]
7. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.976 - 0.982 - - - 0.994 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
8. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.969 - 0.981 - - - 0.988 - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
9. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.969 - 0.976 - - - 0.993 - - -
10. aqr ENSDARG00000016775 1581 1.958 - 0.965 - - - 0.993 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
11. pfkfb3 ENSDARG00000001953 656 1.956 0.976 0.980 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
12. sdhb ENSDARG00000075768 5493 1.95 - 0.961 - - - 0.989 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
13. egfra ENSDARG00000013847 2912 1.949 0.962 - - - - 0.987 - - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
14. aamp ENSDARG00000045019 2818 1.946 0.963 0.983 - - - - - - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
15. rgs12b ENSDARG00000036774 5088 1.936 0.964 0.972 - - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
16. rbm4.2 ENSDARG00000055080 5241 1.931 0.950 - - - - 0.981 - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
17. sdr16c5a ENSDARG00000016233 2413 1.923 0.934 - - - - 0.989 - - - short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
18. ptbp3 ENSDARG00000043757 6760 1.894 0.908 0.986 - - - - - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
19. meaf6 ENSDARG00000101216 6865 1.888 - - - - - 0.996 0.892 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
20. dars ENSDARG00000070043 6854 1.887 - 0.915 - - - 0.972 - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
21. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 1.868 - 0.874 - - - 0.994 - - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
22. pikfyve ENSDARG00000056112 1583 1.862 0.929 0.933 - - - - - - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
23. rrm1 ENSDARG00000014017 7296 1.862 - - - - - 0.991 0.871 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
24. chpt1 ENSDARG00000014572 2926 1.857 0.871 - - - - 0.986 - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
25. snrpc ENSDARG00000009871 9567 1.851 - 0.951 - - - - 0.900 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
26. clint1a ENSDARG00000025535 4965 1.849 0.877 - - - - 0.972 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
27. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.848 - - - - - 0.992 0.856 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
28. QPCT ENSDARG00000089717 1383 1.826 0.834 - - - - 0.992 - - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
29. HNRNPA2B1 HNRNPA2B1 14997 1.821 - - - - - 0.978 0.843 - -
30. slc16a12b ENSDARG00000089885 3744 1.82 0.876 - - - - 0.944 - - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
31. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.815 0.967 - - - - - 0.848 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
32. ube2i ube2i 13024 1.803 0.899 - - - - - 0.904 - -
33. si:dkey-42i9.4 ENSDARG00000008049 4752 1.8 0.983 - - - - - 0.817 - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
34. wu:fq41a10 wu:fq41a10 7009 1.788 0.947 - - - - - 0.841 - -
35. fos fos 817 1.786 - - - - - 0.995 0.791 - -
36. kal1a kal1a 684 1.786 - - - - - 0.995 0.791 - -
37. aldocb ENSDARG00000019702 2111 1.783 0.985 - - - - - 0.798 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
38. hnrpl 6412 1.783 0.962 - - - - - 0.821 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
39. tcf12 ENSDARG00000004714 7606 1.781 - - - - - 0.994 - - 0.787 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
40. PSIP1 PSIP1 5252 1.777 - 0.968 - - - - 0.809 - -
41. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.775 0.966 - - - - - 0.809 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
42. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.769 0.975 - - - - - 0.794 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
43. SLC6A16_1 SLC6A16_1 1130 1.752 0.972 - - - - - 0.780 - -
44. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.751 - 0.978 - - - - 0.773 - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
45. PYURF ENSDARG00000045773 4576 1.751 - - - - - 0.991 - - 0.760 PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
46. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.749 - 0.980 - - - - 0.769 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
47. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.749 - - - - - 0.979 0.770 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
48. thoc2 ENSDARG00000037503 8711 1.748 - - - - - 0.991 0.757 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
49. hnrnpk ENSDARG00000018914 8841 1.746 - 0.927 - - - - 0.819 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
50. dpy30 ENSDARG00000004427 7112 1.741 0.941 - - - - - - - 0.800 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
51. atp1b2a ENSDARG00000099203 4010 1.73 - - - - - 0.977 0.753 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
52. prr12a ENSDARG00000074229 1668 1.728 - 0.978 - - - - 0.750 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
53. cyb5r3 ENSDARG00000005891 4440 1.727 0.867 - - - - 0.860 - - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
54. meis4.1a meis4.1a 1165 1.726 - 0.974 - - - - 0.752 - -
55. rab11ba ENSDARG00000041878 4651 1.723 - 0.916 - - - - - - 0.807 RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
56. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1.719 - - - - - 0.986 0.733 - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
57. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.719 - 0.973 - - - - 0.746 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
58. ctbp2 ctbp2 3255 1.717 0.934 - - - - - 0.783 - -
59. tet2 ENSDARG00000076928 2190 1.714 0.972 - - - - - - - 0.742 tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
60. camlg ENSDARG00000100409 2157 1.712 0.985 - - - - - 0.727 - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
61. psma6a ENSDARG00000019398 2702 1.712 - 0.968 - - - - 0.744 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
62. tox4 tox4 1671 1.706 - 0.977 - - - - 0.729 - -
63. dcaf7 ENSDARG00000054355 3517 1.705 0.982 - - - - - 0.723 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
64. prkca ENSDARG00000039241, ENSDARG00000115657 2136 1.694 - - - - - 0.987 0.707 - - protein kinase C, alpha [Source:ZFIN;Acc:ZDB-GENE-050208-100]
65. ankhd1 ENSDARG00000077860 5510 1.692 - 0.965 - - - - - - 0.727 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
66. ncapd2 ENSDARG00000005058 2819 1.691 - 0.968 - - - - 0.723 - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
67. xpot ENSDARG00000099652 3026 1.678 0.974 - - - - - 0.704 - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
68. zgc:55733 ENSDARG00000103845 1550 1.677 0.975 - - - - - 0.702 - - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
69. ipo7 ENSDARG00000035751 7095 1.664 0.934 - - - - - 0.730 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
70. mrpl36 ENSDARG00000070607 4069 1.661 - 0.939 - - - - - 0.722 - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
71. eif3f ENSDARG00000077533 24387 1.642 - - - - - 0.934 - - 0.708 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
72. atf4b2 atf4b2 4734 1.641 - 0.938 - - - - 0.703 - -
73. smarca5 ENSDARG00000052348 15433 1.634 0.909 - - - - - 0.725 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
74. tubb5 ENSDARG00000037997 18691 1.624 - - - - - 0.911 0.713 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
75. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.615 0.914 - - - - - 0.701 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
76. hoxb9a ENSDARG00000056023 11856 1.583 - - - - - 0.748 0.835 - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
77. si:ch211-207e19.11 si:ch211-207e19.11 9604 1.582 0.833 - - - - 0.749 - - -
78. IM:7163548 IM:7163548 6540 1.581 - - - - - - 0.791 - 0.790
79. snrpb ENSDARG00000011125 11729 1.571 0.858 - - - - - 0.713 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
80. rnf10 ENSDARG00000079687 6768 1.569 - 0.866 - - - - 0.703 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
81. eif5a2 ENSDARG00000056186 43804 1.561 0.847 0.714 - - - - - - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
82. psmd13 ENSDARG00000016239 4229 1.559 - - - - - - 0.753 - 0.806 proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
83. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.548 - 0.834 - - - 0.714 - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
84. RBM6 ENSDARG00000077060 3521 1.547 - - - - - - 0.797 - 0.750 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
85. cdv3 ENSDARG00000023028 12380 1.547 0.795 - - - - - 0.752 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
86. MAPRE2 ENSDARG00000099943 3041 1.525 - - - - - - 0.743 - 0.782 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
87. tma7 ENSDARG00000071670 13372 1.525 - 0.812 - - - - 0.713 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
88. apbb1 ENSDARG00000076560 1748 1.512 - - - - - - 0.734 - 0.778 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
89. cpsf6 ENSDARG00000018618 3923 1.503 - - - - - - 0.768 0.735 - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
90. lrp5 ENSDARG00000006921 3522 1.499 - - - - - - 0.731 - 0.768 low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
91. wu:fb17g07 wu:fb17g07 10567 1.497 - - - - - - 0.789 - 0.708
92. TMEM132E ENSDARG00000090830 1197 1.492 - - - - - - 0.707 - 0.785 transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
93. MIB1 ENSDARG00000102184 3285 1.478 - - - - - - 0.777 - 0.701 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
94. brd7 ENSDARG00000008380 3654 1.466 - - - - - - 0.759 0.707 - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
95. elof1 ENSDARG00000099453 6176 1.462 - - - 0.708 - - 0.754 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
96. znf292b ENSDARG00000043973 3791 1.45 - - - - - - 0.723 - 0.727 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
97. anp32b ENSDARG00000023330 25013 1.446 - 0.715 - - - - 0.731 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
98. CABZ01079490.1 CABZ01079490.1 1808 0.997 - - - - - 0.997 - - -
99. GOLM1 GOLM1 1845 0.996 - - - - - 0.996 - - -
100. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 0.996 - - - - - 0.996 - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]

There are 1145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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