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Results for lysmd3

Gene Name Gene ID Reads Annotation
lysmd3 ENSDARG00000024693 754 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]










Genes with expression patterns similar to lysmd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lysmd3 ENSDARG00000024693 754 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
2. dvl1b ENSDARG00000055552 146 2.466 0.806 - - - - - 0.718 - 0.942 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
3. C11H1orf106 C11H1orf106 263 2.443 - 0.874 - - - - 0.855 0.714 -
4. b4galt6 ENSDARG00000010301 2005 2.401 - 0.756 0.847 - - - - - 0.798 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
5. zgc:66475 ENSDARG00000099519 1348 2.267 - 0.708 0.810 - - - 0.749 - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
6. ndst2b ENSDARG00000060678 453 1.901 - - 0.959 - - - - - 0.942 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
7. TRIP10 TRIP10 1079 1.839 - - 0.910 - - - - - 0.929
8. zgc:173548 ENSDARG00000070048 558 1.785 - - - - - - 0.854 - 0.931 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
9. rapgef1a ENSDARG00000043593 416 1.777 - - 0.964 - - - 0.813 - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
10. CAPN1 ENSDARG00000055338 683 1.771 - 0.828 0.943 - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
11. rab11fip3 ENSDARG00000016490 661 1.751 - 0.796 - - - - - - 0.955 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
12. polr1d ENSDARG00000037570 860 1.748 - - 0.850 - - - - - 0.898 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
13. CFP ENSDARG00000094451 852 1.738 - 0.824 - - - - - - 0.914 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
14. trim16 ENSDARG00000010673 519 1.737 - - - - - 0.777 - - 0.960 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
15. hoxa9a ENSDARG00000105013 1509 1.733 - 0.793 0.940 - - - - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
16. rbpms2b ENSDARG00000079578 436 1.733 - 0.830 - - - - - - 0.903 RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
17. eml3 ENSDARG00000058038 449 1.732 0.801 - - - - - - - 0.931 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
18. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.732 - - - - - - 0.862 - 0.870 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
19. slc16a8 ENSDARG00000045153 478 1.73 - - - - - - 0.777 - 0.953 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
20. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.729 - - 0.883 - - - - - 0.846 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
21. hsf1 ENSDARG00000008818 491 1.727 - 0.791 0.936 - - - - - - heat shock transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-16]
22. pho ENSDARG00000035133 670 1.716 - 0.756 0.960 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
23. rbm42 ENSDARG00000039910 1111 1.709 - - - - - - 0.814 - 0.895 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
24. nsun2 ENSDARG00000056665 740 1.705 - - - - - - 0.756 - 0.949 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
25. trappc2 ENSDARG00000097660 760 1.701 - 0.766 0.935 - - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
26. ATP6AP1L_1 ATP6AP1L_1 508 1.694 - 0.781 - - - - - - 0.913
27. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.689 - - - - - - 0.744 - 0.945 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
28. CASK CASK 1750 1.687 - - 0.855 - - - - - 0.832
29. mrpl3 ENSDARG00000103318 2308 1.685 - - 0.805 - - - - - 0.880 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
30. map3k10 ENSDARG00000055672 284 1.683 - 0.720 0.963 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
31. apopt1 ENSDARG00000092473 682 1.681 0.758 - - - - - - - 0.923 apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
32. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.68 - - 0.950 - - - 0.730 - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
33. MIB1 ENSDARG00000102184 3285 1.679 - 0.815 - - - - - - 0.864 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
34. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.679 - 0.737 - - - - - - 0.942 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
35. CENPF ENSDARG00000055133 436 1.679 0.732 - - - - - - - 0.947 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
36. wdr66 ENSDARG00000059855 276 1.675 - - 0.963 - - - - 0.712 - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
37. wif1 ENSDARG00000005541 1689 1.675 - - 0.814 - - - - - 0.861 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
38. cdk13 ENSDARG00000076791 828 1.671 0.741 - - - - - - - 0.930 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
39. herc2 ENSDARG00000073841 486 1.668 - - 0.953 - - - 0.715 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
40. ptk2.1 ptk2.1 766 1.661 - - 0.939 - - 0.722 - - -
41. polr2gl ENSDARG00000056127 1771 1.656 - - 0.844 - - - - - 0.812 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
42. ptprk ENSDARG00000063416 742 1.656 - - - - - - - 0.705 0.951 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
43. hdac4 ENSDARG00000098349 1370 1.654 - 0.769 - - - - - - 0.885 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
44. RNPEPL1 ENSDARG00000007813 557 1.654 - - - - - - 0.708 - 0.946 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
45. pkp2 ENSDARG00000023026 120 1.651 - 0.790 - - - - 0.861 - - plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
46. wdr26b ENSDARG00000006812 2216 1.638 - - 0.824 - - - - - 0.814 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
47. hoxd13a ENSDARG00000059256 1190 1.637 - - 0.747 - - - 0.890 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
48. etnk1 ENSDARG00000019420 2166 1.637 - - 0.842 - - - - 0.795 - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
49. vps72 1164 1.635 - 0.713 0.922 - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
50. klhdc10 ENSDARG00000007764 529 1.634 - - - - - - 0.721 - 0.913 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
51. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.631 - - - - - - 0.750 - 0.881 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
52. DTX3 DTX3 303 1.629 0.825 - - - - - 0.804 - -
53. ints8 ENSDARG00000057986 1063 1.62 - - - - - - 0.722 - 0.898 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
54. bik ENSDARG00000045549 18 1.611 - - - - - - 0.838 0.773 - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
55. melk ENSDARG00000030759 1150 1.61 - - - - - - 0.707 - 0.903 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
56. angptl4 ENSDARG00000035859 2701 1.609 - - - - - - - 0.768 0.841 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
57. dvl3a ENSDARG00000015707 1132 1.608 - 0.761 - - - - - - 0.847 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
58. nr2f6a ENSDARG00000003607 4779 1.607 - - 0.738 - - - - - 0.869 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
59. apnl ENSDARG00000090900 21 1.607 - - - - - - 0.838 0.769 - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
60. edem2 ENSDARG00000028448 236 1.594 - - - - - - 0.851 0.743 - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
61. tmem248 ENSDARG00000018825 1560 1.584 - 0.728 - - - - - - 0.856 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
62. arfgap3 ENSDARG00000097583 1087 1.582 - 0.787 - - - - - 0.795 - ADP-ribosylation factor GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1]
63. ift46 ENSDARG00000011240 2499 1.581 - 0.853 0.728 - - - - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
64. SPIN4_1 SPIN4_1 2562 1.579 - - - - - - 0.791 - 0.788
65. lrrc17 ENSDARG00000037960 1585 1.579 - - 0.837 - - - 0.742 - - leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
66. C3H17orf103 C3H17orf103 973 1.577 - - - - - - 0.703 - 0.874
67. cwc22 ENSDARG00000014008 2385 1.576 - 0.759 - - - - - - 0.817 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
68. EPC1 EPC1 500 1.553 0.764 - - - - - 0.789 - -
69. armc9 ENSDARG00000087299 459 1.54 - - - - - - 0.799 0.741 - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
70. MAD2L1BP ENSDARG00000104943 351 1.509 - 0.784 - - - - - 0.725 - MAD2L1 binding protein [Source:ZFIN;Acc:ZDB-GENE-161230-19]
71. C13H6orf203 C13H6orf203 881 1.506 0.733 0.773 - - - - - - -
72. ARMCX3 ARMCX3 328 1.501 - - - - - 0.719 0.782 - -
73. WDR1 ENSDARG00000114022 7532 1.501 - - 0.746 - - - - - 0.755 WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
74. CABZ01028296.1 CABZ01028296.1 6203 1.499 - - 0.787 - - - - - 0.712
75. swt1 ENSDARG00000094010 472 1.498 - - - - - 0.753 - 0.745 - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
76. pms2 ENSDARG00000075672, ENSDARG00000115929 248 1.489 0.721 - - - - - - 0.768 - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
77. eepd1 ENSDARG00000071116 176 1.489 0.761 - - - - 0.728 - - - endonuclease/exonuclease/phosphatase family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1831]
78. ppp6r2b ENSDARG00000069654 323 1.487 - 0.728 - - - - - 0.759 - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
79. FP236168.1 FP236168.1 150 1.484 - - - - - - 0.735 0.749 -
80. gsto2 ENSDARG00000033285 583 1.483 0.773 0.710 - - - - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
81. trim35-40 ENSDARG00000042116 398 1.483 - - - - - 0.707 0.776 - - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
82. cep76 ENSDARG00000058319 143 1.481 - - - - - - 0.704 0.777 - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
83. CCDC61 ENSDARG00000062307 582 1.48 - 0.719 - - - - 0.761 - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
84. supt6h ENSDARG00000006524 3221 1.48 - - 0.778 - - - - - 0.702 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
85. si:ch211-288g17.3 ENSDARG00000070959 2425 1.473 - 0.741 - - - - - - 0.732 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
86. ugt5b4 ENSDARG00000091916 130 1.464 - 0.761 - - - - 0.703 - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
87. si:dkeyp-68b7.10 ENSDARG00000095024 273 1.459 - 0.754 - - - - 0.705 - - si:dkeyp-68b7.10 [Source:ZFIN;Acc:ZDB-GENE-070912-667]
88. narfl ENSDARG00000062216 768 1.456 - 0.751 - - - 0.705 - - - nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
89. fgfr1a ENSDARG00000011027 2705 1.456 - - 0.726 - - - - - 0.730 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
90. dao.3 ENSDARG00000035601 15 1.455 0.714 - - - - - 0.741 - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
91. si:ch211-23l10.3 ENSDARG00000073998 113 1.452 - 0.750 - - - - - 0.702 - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
92. ctnnal1 ENSDARG00000018162 747 0.97 - - - - - - - - 0.970 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
93. alg6 ENSDARG00000017617 483 0.969 - - 0.969 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
94. pcdh8 ENSDARG00000006467 317 0.968 - - 0.968 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
95. PLA2G3_1 PLA2G3_1 411 0.967 - - 0.967 - - - - - -
96. TRIM14_6 TRIM14_6 342 0.966 - - 0.966 - - - - - -
97. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.966 - - 0.966 - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
98. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.966 - - 0.966 - - - - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
99. C3H16orf58 C3H16orf58 487 0.966 - - 0.966 - - - - - -
100. CMTM8 CMTM8 71 0.964 - - 0.964 - - - - - -

There are 1624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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