Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lysmd2

Gene Name Gene ID Reads Annotation
lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]










Genes with expression patterns similar to lysmd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
2. pcdh18a ENSDARG00000089805 1096 1.789 - - - - 0.987 - 0.802 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
3. KIF1A KIF1A 1686 1.778 - - - - 0.973 - 0.805 - -
4. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.771 - - - - 0.978 - 0.793 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
5. gnao1a ENSDARG00000016676 8184 1.765 - - - - 0.979 - 0.786 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
6. ctnnd2b ENSDARG00000003779 964 1.714 - - - - 0.980 - 0.734 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
7. azi1 azi1 507 1.704 - - - - 0.974 - 0.730 - -
8. dpysl3 ENSDARG00000002587 4381 1.704 - - - - 0.945 - 0.759 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
9. dla ENSDARG00000010791 9281 1.703 - - - - 0.918 - 0.785 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
10. her4.3 ENSDARG00000070770 613 1.697 - - - - 0.987 - 0.710 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
11. scrt2 ENSDARG00000056175 4331 1.692 - - - - 0.940 - 0.752 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
12. mbd1 mbd1 1309 1.69 - - - - 0.982 0.708 - - -
13. ranbp9 ENSDARG00000061048 2687 1.681 - 0.720 - - 0.961 - - - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
14. CBFA2T3 ENSDARG00000079012 6799 1.671 - - - - 0.777 - 0.894 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
15. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.667 - 0.722 - - 0.945 - - - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
16. samm50l ENSDARG00000039681 2465 1.663 0.712 - - - 0.951 - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
17. slc1a2b ENSDARG00000102453 3136 1.641 - - - - 0.882 - 0.759 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
18. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.634 - 0.755 - - 0.879 - - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
19. ehmt2 ENSDARG00000102325 984 1.634 - - - 0.713 0.921 - - - - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
20. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 1.597 - - - - 0.704 - 0.893 - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
21. traip ENSDARG00000011262 410 1.589 - 0.728 - - - - - 0.861 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
22. si:dkey-95p16.2 ENSDARG00000093484 3413 1.586 - 0.722 - - 0.864 - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
23. gbp ENSDARG00000040059 1939 1.585 - - - - - 0.874 0.711 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
24. YEATS2 ENSDARG00000078767, ENSDARG00000097253 854 1.581 - - - - - 0.816 0.765 - - YEATS domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-292]
25. ZFHX3 ENSDARG00000103057 7759 1.553 - - - - 0.803 - 0.750 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
26. nova2 ENSDARG00000017673 7685 1.53 - - - - 0.757 - 0.773 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
27. top2b ENSDARG00000034195 3715 1.526 - 0.795 - - - - 0.731 - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
28. tmem130 ENSDARG00000103789 756 1.521 - 0.750 - - - - 0.771 - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
29. fhdc1 ENSDARG00000074812 934 1.515 - - - - - 0.703 0.812 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
30. ZDHHC20 ZDHHC20 366 1.512 - - - - - 0.760 - 0.752 -
31. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.491 - - - - 0.785 0.706 - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
32. psmf1 ENSDARG00000022652 527 1.452 - - - - - 0.736 0.716 - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
33. nup107 ENSDARG00000016010 1043 1.448 - - - 0.744 - 0.704 - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
34. CT030046.1 CT030046.1 190 1.446 - 0.730 - - - - 0.716 - -
35. lsm6 ENSDARG00000036995 4377 1.433 - - - 0.704 - - 0.729 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
36. KIF13A ENSDARG00000069594 352 1.428 - - - - - 0.700 0.728 - - kinesin family member 13A [Source:ZFIN;Acc:ZDB-GENE-090901-1]
37. tspan13b ENSDARG00000070479 542 1.42 - - - 0.710 - - 0.710 - - tetraspanin 13b [Source:ZFIN;Acc:ZDB-GENE-041010-45]
38. hmgb1b ENSDARG00000030479 10398 1.412 - - - - 0.708 - 0.704 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
39. gon4l ENSDARG00000005867 982 0.989 - - - - 0.989 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
40. frem1b ENSDARG00000062402 750 0.989 - - - - 0.989 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
41. cdan1 ENSDARG00000042261 658 0.989 - - - - 0.989 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
42. CHD6 ENSDARG00000017244 219 0.988 - - - - 0.988 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
43. Mar-01 Mar-01 176 0.987 - - - - 0.987 - - - -
44. tbx19 ENSDARG00000079187 133 0.987 - - - - 0.987 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
45. aatkb ENSDARG00000104442 392 0.987 - - - - 0.987 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
46. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.987 - - - - 0.987 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
47. slc38a4 ENSDARG00000018149 2344 0.987 - - - - 0.987 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
48. sh3bp5lb 1090 0.987 - - - - 0.987 - - - - SH3-binding domain protein 5-like, b
49. tpcn1 ENSDARG00000062362 563 0.986 - - - - 0.986 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
50. brd7 ENSDARG00000008380 3654 0.986 - - - - 0.986 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
51. CASKIN2_1 CASKIN2_1 2299 0.986 - - - - 0.986 - - - -
52. gsto2 ENSDARG00000033285 583 0.986 - - - - 0.986 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
53. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.986 - - - - 0.986 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
54. BX548000.3 BX548000.3 241 0.986 - - - - 0.986 - - - -
55. anapc1 ENSDARG00000075687 488 0.986 - - - - 0.986 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
56. ccnb1 ENSDARG00000051923 3226 0.986 - - - - 0.986 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
57. C1H3orf70 C1H3orf70 634 0.986 - - - - 0.986 - - - -
58. rassf10a 417 0.986 - - - - 0.986 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
59. CR933820.2 CR933820.2 152 0.986 - - - - 0.986 - - - -
60. ncaph2 ENSDARG00000033757 1042 0.986 - - - - 0.986 - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
61. wfikkn2a ENSDARG00000013460 859 0.985 - - - - 0.985 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
62. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.985 - - - - 0.985 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
63. tmem135 ENSDARG00000069157 918 0.985 - - - - 0.985 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
64. C8H1orf174 C8H1orf174 372 0.985 - - - - 0.985 - - - -
65. nol8 ENSDARG00000044143 425 0.985 - - - - 0.985 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
66. myo9al1 myo9al1 1194 0.985 - - - - 0.985 - - - -
67. si:ch211-282k23.2 ENSDARG00000093591 447 0.985 - - - - 0.985 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
68. gpr161 ENSDARG00000055659 454 0.985 - - - - 0.985 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
69. esrrb ENSDARG00000100847 636 0.984 - - - - 0.984 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
70. ikbkb ENSDARG00000079123 498 0.984 - - - - 0.984 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
71. farp1 ENSDARG00000074381 406 0.984 - - - - 0.984 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
72. si:dkey-19e4.5 ENSDARG00000089886 2562 0.984 - - - - 0.984 - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
73. invs ENSDARG00000002213 261 0.984 - - - - 0.984 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
74. tmem62 ENSDARG00000053890 1233 0.984 - - - - 0.984 - - - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
75. kat2a ENSDARG00000104734 802 0.984 - - - - 0.984 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
76. setd8a 2549 0.984 - - - - 0.984 - - - - SET domain containing (lysine methyltransferase) 8a
77. alpl ENSDARG00000015546 334 0.983 - - - - 0.983 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
78. lrrfip2 ENSDARG00000010400 2633 0.983 - - - - 0.983 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
79. usf2 ENSDARG00000020228 2667 0.983 - - - - 0.983 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
80. espn ENSDARG00000076414 343 0.983 - - - - 0.983 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
81. znf362 znf362 869 0.983 - - - - 0.983 - - - -
82. utp3 ENSDARG00000056720 922 0.983 - - - - 0.983 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
83. pdcd2l ENSDARG00000002754 417 0.983 - - - - 0.983 - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
84. rybpa ENSDARG00000037773 904 0.983 - - - - 0.983 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
85. smurf2 ENSDARG00000038067 2057 0.983 - - - - 0.983 - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
86. sepsecs ENSDARG00000033861 478 0.982 - - - - 0.982 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
87. cnpy1 ENSDARG00000003757 1132 0.982 - - - - 0.982 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
88. fam129ba ENSDARG00000062970 1578 0.982 - - - - 0.982 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
89. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.982 - - - - 0.982 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
90. adi1 ENSDARG00000020448 1402 0.982 - - - - 0.982 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
91. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.981 - - - - 0.981 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
92. MTA1 ENSDARG00000007198 731 0.981 - - - - 0.981 - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
93. alx4a ENSDARG00000088332 895 0.981 - - - - 0.981 - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
94. mettl16 ENSDARG00000055838 818 0.981 - - - - 0.981 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
95. slc39a13 ENSDARG00000000442 1367 0.981 - - - - 0.981 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
96. bnc2 ENSDARG00000069989 757 0.98 - - - - 0.980 - - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
97. fzd8a ENSDARG00000045444 802 0.98 - - - - 0.980 - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
98. gas5 279 0.98 - - - - 0.980 - - - - growth arrest-specific 5, transcript variant X4
99. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.98 - - - - 0.980 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
100. znf143a ENSDARG00000012887 1393 0.979 - - - - 0.979 - - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]

There are 1409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA