Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lysmd1

Gene Name Gene ID Reads Annotation
lysmd1 ENSDARG00000054789 277 LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]










Genes with expression patterns similar to lysmd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lysmd1 ENSDARG00000054789 277 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
2. HYKK HYKK 261 1.763 0.838 - - - - - - 0.925 -
3. srgn ENSDARG00000077069 612 1.71 - 0.837 - - - - - 0.873 - serglycin [Source:ZFIN;Acc:ZDB-GENE-030131-7127]
4. chst12a ENSDARG00000028786 598 1.697 0.892 - - - - - - 0.805 - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
5. slc17a7 slc17a7 129 1.691 - 0.726 - - - - - 0.965 -
6. TTF1_4 TTF1_4 504 1.673 - - - - - 0.715 - 0.958 -
7. chst13 chst13 669 1.658 - 0.794 - - - - - 0.864 -
8. mcmbp ENSDARG00000055314 731 1.619 - - - 0.753 - - - 0.866 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
9. dachd ENSDARG00000069440 271 1.617 0.715 - - - - - - 0.902 - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
10. ZPLXDC2 ZPLXDC2 1298 1.61 0.901 - - 0.709 - - - - -
11. hccs hccs 1758 1.6 - - - - - 0.809 - 0.791 -
12. fam173b ENSDARG00000033451 513 1.598 - - - - - - 0.709 0.889 - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
13. ccdc22 ENSDARG00000052379 2276 1.597 0.769 - - - - - - 0.828 - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
14. akr7a3 ENSDARG00000016649 314 1.595 0.862 - - - - - 0.733 - - aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040718-62]
15. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.566 - - - - - - 0.758 0.808 - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
16. snx25 ENSDARG00000099545 84 1.559 0.815 - - - - - 0.744 - - sorting nexin 25 [Source:ZFIN;Acc:ZDB-GENE-121105-11]
17. BX649282.1 ENSDARG00000105704 347 1.559 - - - - - - 0.701 0.858 -
18. SEMA4C ENSDARG00000079611 610 1.55 - 0.833 - 0.717 - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
19. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.546 0.780 - - - - - - 0.766 - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
20. tmem9 ENSDARG00000055757 340 1.535 - 0.720 - - - - - 0.815 - transmembrane protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-6083]
21. lmo2 ENSDARG00000095019 1098 1.473 - - - - - 0.746 - 0.727 - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
22. GSTK1_1 GSTK1_1 316 1.471 - 0.769 - - - - 0.702 - -
23. bub1 ENSDARG00000077029 634 1.434 - 0.732 - - - - - 0.702 - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
24. smarcd2 ENSDARG00000088877 416 0.962 - - - - - - - 0.962 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
25. ndufaf4 ENSDARG00000077859 552 0.962 - - - - - - - 0.962 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
26. cenpo ENSDARG00000075619, ENSDARG00000111160 378 0.961 0.961 - - - - - - - - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
27. zgc:113294 ENSDARG00000032285 132 0.957 0.957 - - - - - - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
28. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.949 0.949 - - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
29. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.946 - - - - - - - 0.946 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
30. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.946 - - - - - - - 0.946 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
31. mir130b 180 0.944 - - - - - - - 0.944 - microRNA 130b
32. pard3 pard3 161 0.944 - - - - - - - 0.944 -
33. si:dkey-157e10.7 si:dkey-157e10.7 105 0.944 - - - - - - - 0.944 -
34. si:ch73-167f18.3 si:ch73-167f18.3 78 0.943 - - - - - - - 0.943 -
35. hn1a hn1a 115 0.943 - - - - - - - 0.943 -
36. si:dkey-100h21.2 si:dkey-100h21.2 30 0.942 - - - - - - - 0.942 -
37. IKZF4 ENSDARG00000037068 36 0.942 - - - - - - - 0.942 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
38. jam3a ENSDARG00000114589 630 0.942 - - - - - - - 0.942 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
39. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.942 - - - - - - - 0.942 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
40. CABZ01045230.1 CABZ01045230.1 158 0.942 - - - - - - - 0.942 -
41. zgc:174877 ENSDARG00000079278 143 0.942 - - - - - - - 0.942 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
42. pde6b ENSDARG00000011671 44 0.942 - - - - - - - 0.942 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
43. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.941 - - - - - - - 0.941 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
44. adcyap1a ENSDARG00000004015 67 0.941 - - - - - - - 0.941 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
45. GDPD4_1 GDPD4_1 190 0.941 - - - - - - - 0.941 -
46. pus7 ENSDARG00000031774 195 0.94 - - - - - - - 0.940 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
47. rpgra ENSDARG00000056617 77 0.94 - - - - - - - 0.940 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
48. spef2 ENSDARG00000098330 59 0.94 - - - - - - - 0.940 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
49. ankdd1b ENSDARG00000025866 51 0.94 - - - - - - - 0.940 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
50. VDAC3 ENSDARG00000003695 34 0.94 - - - - - - - 0.940 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
51. SLC27A3 SLC27A3 240 0.939 0.939 - - - - - - - -
52. ly75 ENSDARG00000053113 196 0.939 - - - - - - - 0.939 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
53. hoxa4a 37 0.938 - - - - - - - 0.938 - homeobox A4a, transcript variant X4
54. mea1 ENSDARG00000039820 589 0.938 - - - - - - - 0.938 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
55. si:dkey-17e6.2 si:dkey-17e6.2 72 0.938 - - - - - - - 0.938 -
56. KBTBD13_1 KBTBD13_1 116 0.937 - - - - - - - 0.937 -
57. SHANK1 ENSDARG00000060539 102 0.937 - - - - - - - 0.937 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
58. MAP7 MAP7 98 0.936 - - - - - - - 0.936 -
59. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.936 - - - - - - - 0.936 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
60. si:dkey-253d23.2 ENSDARG00000071589 143 0.936 - - - - - - - 0.936 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
61. CIT CIT 212 0.936 - - - - - - - 0.936 -
62. prkag3b ENSDARG00000000369 1945 0.936 - - - - - - - 0.936 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
63. nrxn2b ENSDARG00000063150 343 0.935 - - - - - - - 0.935 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
64. BX511021.1 ENSDARG00000073936 647 0.935 - - - - - - - 0.935 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
65. tarsl2 ENSDARG00000092774 505 0.935 - - - - - - - 0.935 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
66. BX005410.2 BX005410.2 44 0.935 - - - - - - - 0.935 -
67. slc6a6a ENSDARG00000012534 183 0.934 - - - - - - - 0.934 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
68. ANGPT4 ENSDARG00000076787 140 0.934 - - - - - - - 0.934 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
69. commd1 ENSDARG00000031203 340 0.934 - - - - - - - 0.934 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
70. zgc:174688 zgc:174688 170 0.933 - - - - - - - 0.933 -
71. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.933 - - - - - - - 0.933 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
72. rhogb ENSDARG00000004301 358 0.933 - - - - - - - 0.933 - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
73. b3galtla b3galtla 111 0.933 - - - - - - - 0.933 -
74. dclk1a ENSDARG00000018856 177 0.932 - - - - - - - 0.932 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
75. nrp2b ENSDARG00000038446 783 0.932 - - - - - - - 0.932 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
76. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.932 - - - - - - - 0.932 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
77. timm10 ENSDARG00000069116 4459 0.932 - - - - - - - 0.932 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
78. rwdd2b ENSDARG00000055426 294 0.93 - - - - - - - 0.930 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
79. ALPK1 195 0.929 - - - - - - - 0.929 - alpha-kinase 1
80. p2rx3b ENSDARG00000029718 105 0.928 - - - - - - - 0.928 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
81. ENSDARG00000029117 ENSDARG00000029117 80 0.927 - - - - - - - 0.927 -
82. ncoa6 ENSDARG00000071272 759 0.926 - - - - - - - 0.926 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
83. reep1 ENSDARG00000014854 915 0.926 - - - - - - - 0.926 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
84. enosf1 ENSDARG00000038359 209 0.926 - - - - - - - 0.926 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
85. aatkb ENSDARG00000104442 392 0.926 - - - - - - - 0.926 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
86. flad1 ENSDARG00000070390 604 0.924 - - - - - - - 0.924 - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
87. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.924 0.924 - - - - - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
88. CR381544.1 ENSDARG00000088187 821 0.924 - - - - - - - 0.924 -
89. ERO1LB ERO1LB 1433 0.923 - - - - - - - 0.923 -
90. pdxka ENSDARG00000088959 217 0.923 - - - - - - - 0.923 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
91. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.923 - - - - - - - 0.923 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
92. camk2d1 ENSDARG00000043010 669 0.923 - - - - - - - 0.923 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
93. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.922 - - - - - - - 0.922 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
94. smg8 ENSDARG00000061378 1164 0.922 0.922 - - - - - - - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
95. alg12 ENSDARG00000041199, ENSDARG00000111299 365 0.922 - - - - - - - 0.922 - ALG12, alpha-1,6-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-041210-295]
96. fgf12a ENSDARG00000027957 143 0.921 - - - - - - - 0.921 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
97. itpka ENSDARG00000042856, ENSDARG00000115453 391 0.921 - - - - - - - 0.921 - inositol-trisphosphate 3-kinase A [Source:ZFIN;Acc:ZDB-GENE-030616-116]
98. C20H1orf112 C20H1orf112 316 0.92 - - - - - - - 0.920 -
99. CABZ01003826.1 CABZ01003826.1 486 0.919 - - - - - - - 0.919 -
100. adar ENSDARG00000012389 520 0.919 0.919 - - - - - - - - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]

There are 776 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA