Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lyrm5b

Gene Name Gene ID Reads Annotation
lyrm5b ENSDARG00000045827 91 LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]










Genes with expression patterns similar to lyrm5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lyrm5b ENSDARG00000045827 91 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
2. fam86a fam86a 174 2.599 0.837 0.850 - - - 0.912 - - -
3. sfi1 ENSDARG00000053992 1075 2.576 - 0.887 - - - 0.952 0.737 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
4. si:dkey-18j14.4 si:dkey-18j14.4 60 2.47 0.806 0.790 - - - 0.874 - - -
5. ABCC6_1 ABCC6_1 403 1.835 - 0.872 - - - 0.963 - - -
6. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.832 - 0.866 - - - 0.966 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
7. si:dkey-50i6.5 ENSDARG00000101320 95 1.808 - 0.837 - - - 0.971 - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
8. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1.788 - 0.909 - - - 0.879 - - -
9. pou5f3 ENSDARG00000044774 212 1.775 - 0.898 - - - - 0.877 - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
10. CABZ01072607.1 ENSDARG00000113761 784 1.772 - - - - - 0.960 0.812 - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
11. arsg ENSDARG00000101715 57 1.754 0.815 - - - - 0.939 - - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
12. bag5 ENSDARG00000017316 195 1.742 - 0.778 - - - 0.964 - - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
13. si:dkey-1f1.4 si:dkey-1f1.4 105 1.727 0.754 - - - - 0.973 - - -
14. nlgn4a 102 1.725 0.810 0.915 - - - - - - - neuroligin 4a, transcript variant X1
15. TTC17 ENSDARG00000044812 124 1.723 0.767 - - - - 0.956 - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
16. tnip1 ENSDARG00000015653 94 1.722 - 0.838 - - - 0.884 - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
17. mcm9 ENSDARG00000013528 212 1.722 0.863 0.859 - - - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
18. aar2 ENSDARG00000018658 297 1.693 - - - - - 0.917 0.776 - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
19. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.689 - 0.909 - - - 0.780 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
20. B3GNT2_1 B3GNT2_1 380 1.683 - 0.732 - - - 0.951 - - -
21. aff2 ENSDARG00000052242 540 1.682 - 0.765 - - - 0.917 - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
22. got1l1 ENSDARG00000053644 49 1.68 - 0.980 - - - - 0.700 - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
23. tnmd ENSDARG00000052615 42 1.661 - 0.835 - - - - 0.826 - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
24. CABZ01074081.1 CABZ01074081.1 109 1.659 - - - - - 0.942 0.717 - -
25. arf3b ENSDARG00000036998, ENSDARG00000112366 38 1.658 0.815 0.843 - - - - - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
26. CR848664.3 CR848664.3 183 1.649 - 0.884 - - - - 0.765 - -
27. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.645 - 0.767 - - - 0.878 - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
28. si:dkey-45k15.1 ENSDARG00000061714 32 1.637 - 0.850 - - - - 0.787 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
29. ddx31 ENSDARG00000035507 167 1.629 - 0.754 - - - 0.875 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
30. cldn11a ENSDARG00000020031 284 1.624 0.837 - - - - - 0.787 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
31. si:dkey-118k5.3 ENSDARG00000087736 155 1.611 0.815 - - - - 0.796 - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
32. brap ENSDARG00000008560 821 1.597 - 0.748 - - - 0.849 - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
33. TRIM14_7 TRIM14_7 381 1.593 0.836 - - - - - 0.757 - -
34. CU104697.1 CU104697.1 19 1.581 - 0.820 - - - - 0.761 - -
35. ptprjb ptprjb 95 1.578 0.767 - - - - - 0.811 - -
36. ercc5 ENSDARG00000023678 468 1.571 - - - - - 0.851 0.720 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
37. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.57 - - - - - 0.736 0.834 - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
38. ZNF135_5 ZNF135_5 73 1.559 - 0.703 - - - - 0.856 - -
39. ppp1r3da ENSDARG00000077513 109 1.557 - 0.840 - - - - 0.717 - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
40. zgc:110377 zgc:110377 193 1.544 0.719 0.825 - - - - - - -
41. dnah12 ENSDARG00000059987 110 1.543 0.821 - - - - - 0.722 - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
42. TP53BP2 TP53BP2 217 1.54 0.825 0.715 - - - - - - -
43. tmem184c ENSDARG00000078789, ENSDARG00000111570 395 1.536 0.706 - - - - 0.830 - - - transmembrane protein 184C [Source:ZFIN;Acc:ZDB-GENE-090312-89]
44. CR855996.2 ENSDARG00000104450 310 1.534 - 0.747 - - - - 0.787 - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
45. samd1b ENSDARG00000079062 280 1.532 0.813 0.719 - - - - - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
46. cap1 ENSDARG00000016350 891 1.499 - 0.772 - - - 0.727 - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
47. csdc2b 82 1.496 - - 0.743 - - 0.753 - - - cold shock domain containing C2, RNA binding b
48. qser1 ENSDARG00000074750 597 1.493 - - - - - 0.706 0.787 - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
49. fam83fb ENSDARG00000104188 79 1.493 0.730 - - - - - 0.763 - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
50. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.483 0.751 - - - - - 0.732 - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
51. postna ENSDARG00000043806 143 1.481 - 0.749 - - - - 0.732 - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
52. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 1.478 - - - - - 0.775 0.703 - - matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
53. wbp1la ENSDARG00000013245 143 1.476 0.776 - - - - - 0.700 - - WW domain binding protein 1-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1961]
54. map3k10 ENSDARG00000055672 284 1.467 0.703 0.764 - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
55. eml3 ENSDARG00000058038 449 1.408 - 0.702 - - - 0.706 - - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
56. RBBP6_2 RBBP6_2 23 1 - - - - - 1.000 - - -
57. si:dkeyp-46h3.2 ENSDARG00000092498 23 1 - - - - - 1.000 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
58. pnocb ENSDARG00000024189 18 1 - - - - - 1.000 - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
59. si:dkey-216e24.4 si:dkey-216e24.4 14 1 - - - - - 1.000 - - -
60. ARHGEF38 ENSDARG00000079377 9 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
61. hnf1a ENSDARG00000009470 60 1 - - - - - 1.000 - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
62. chia.3 ENSDARG00000009612 14 1 - - - - - 1.000 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
63. zgc:154040 16 1 - - - - - 1.000 - - - zgc:154040
64. si:dkey-239j18.3 ENSDARG00000089806 12918 0.999 - - - - - 0.999 - - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
65. myo7bb ENSDARG00000077201 7 0.998 - - - - - 0.998 - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
66. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.998 - - - - - 0.998 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
67. si:dkey-178o8.2 si:dkey-178o8.2 15 0.998 - - - - - 0.998 - - -
68. CABZ01044346.1 CABZ01044346.1 12 0.998 - - - - - 0.998 - - -
69. ralgps1 ENSDARG00000068370 39 0.997 - - - - - 0.997 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
70. MPZL2 MPZL2 31 0.997 - - - - - 0.997 - - -
71. syt14b ENSDARG00000001891 85 0.997 - - - - - 0.997 - - - synaptotagmin XIVb [Source:ZFIN;Acc:ZDB-GENE-041014-36]
72. b3gntl1 ENSDARG00000043431 50 0.995 - - - - - 0.995 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
73. osbpl1a ENSDARG00000105147 42 0.995 - - - - - 0.995 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
74. cyp19a1b ENSDARG00000098360 8 0.995 - - - - - 0.995 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
75. sod3b ENSDARG00000079183 39 0.995 - - - - - 0.995 - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
76. SIGLEC15 SIGLEC15 10 0.994 - - - - - 0.994 - - -
77. dennd2db ENSDARG00000030250 24 0.994 - - - - - 0.994 - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
78. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 0.994 - - - - - 0.994 - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
79. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 0.994 - - - - - 0.994 - - - DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
80. si:dkey-30j10.5 ENSDARG00000093186 13 0.994 - - - - - 0.994 - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
81. CABZ01050100.1 CABZ01050100.1 17 0.993 - - - - - 0.993 - - -
82. PEG3_22 PEG3_22 33 0.993 - - - - - 0.993 - - -
83. CU570781.1 ENSDARG00000094656 49 0.993 - - - - - 0.993 - - -
84. stub1 ENSDARG00000045228 105 0.993 - - - - - 0.993 - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
85. cry2b cry2b 517 0.993 - - - - - 0.993 - - -
86. WIPI1 ENSDARG00000040657 138 0.992 - - - - - 0.992 - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
87. wdfy2 ENSDARG00000040453 406 0.992 - - - - - 0.992 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
88. BX936371.1 BX936371.1 77 0.989 - - - - - 0.989 - - -
89. zgc:136791 97 0.988 - - - - - 0.988 - - - zgc:136791, transcript variant X3
90. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.988 - - - - - 0.988 - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
91. mfsd12a ENSDARG00000061908 68 0.988 - - - - - 0.988 - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
92. cx27.5 ENSDARG00000035553 12 0.987 - - - - - 0.987 - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
93. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.987 - - - - - 0.987 - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
94. st6galnac1.1 ENSDARG00000043814 95 0.987 - - - - - 0.987 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
95. BX664625.1 ENSDARG00000043131 8 0.986 - - - - - 0.986 - - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
96. lgalslb ENSDARG00000055525 18 0.985 - - - - - 0.985 - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
97. c1qtnf5 ENSDARG00000056134 729 0.984 - - - - - 0.984 - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
98. wu:fi42e03 ENSDARG00000070709 276 0.983 - - - - - 0.983 - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
99. CR735107.2 CR735107.2 476 0.982 - - - - - 0.982 - - -
100. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 0.981 - - - - - 0.981 - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]

There are 1452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA