Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lyrm4

Gene Name Gene ID Reads Annotation
lyrm4 ENSDARG00000078352 2245 LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]










Genes with expression patterns similar to lyrm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lyrm4 ENSDARG00000078352 2245 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
2. mto1 ENSDARG00000055679 859 2.361 0.932 - - - - 0.724 - 0.705 - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
3. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 2.314 0.872 - - - - - 0.727 0.715 - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
4. mrps2 ENSDARG00000103198 2410 2.173 - - - - - 0.717 0.709 0.747 - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
5. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 1.693 0.946 0.747 - - - - - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
6. tmem55a 1331 1.688 0.918 0.770 - - - - - - - transmembrane protein 55A
7. slc25a11 ENSDARG00000035741 3377 1.686 - - - - - 0.871 0.815 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
8. sumo3b ENSDARG00000035993 3414 1.684 0.927 - - - - - 0.757 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
9. vapal ENSDARG00000115862 3108 1.668 0.902 - - - - - 0.766 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
10. ubl7 ubl7 1435 1.659 0.931 - - - - - 0.728 - -
11. mrpl16 ENSDARG00000075325 592 1.651 0.885 - - - - - - 0.766 - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
12. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.65 0.944 - - - - 0.706 - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
13. prickle1a ENSDARG00000040649 700 1.649 0.939 - - - - - 0.710 - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
14. golga7 ENSDARG00000057676 4691 1.626 0.896 - - - - - 0.730 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
15. mccc2 ENSDARG00000017571 5635 1.621 0.878 - - - - - 0.743 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
16. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.589 0.763 - - - - - 0.826 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
17. snx3 ENSDARG00000008678 3430 1.576 - - - - - 0.761 0.815 - - sorting nexin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-921]
18. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.567 0.858 - - 0.709 - - - - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
19. akirin2 ENSDARG00000058729 13245 1.563 0.854 - - - - - 0.709 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
20. psma4 ENSDARG00000045928 5112 1.562 0.856 - - - - - 0.706 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
21. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.56 - - - - - 0.782 0.778 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
22. ube2f ENSDARG00000025754 1946 1.556 0.856 - - - - - 0.700 - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
23. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.554 - 0.759 - - - - 0.795 - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
24. slc5a6 slc5a6 224 1.551 - - - 0.765 - - - 0.786 -
25. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.551 - - - - - 0.740 0.811 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
26. ilk ENSDARG00000056964 6686 1.547 - - - - - 0.703 0.844 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
27. lman2lb ENSDARG00000088663 1641 1.546 - - - - - 0.765 0.781 - - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
28. ccdc25 ENSDARG00000021753 3837 1.544 0.824 - - - - - 0.720 - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
29. pum1 ENSDARG00000099256 5017 1.542 - - - - - 0.811 0.731 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
30. mrpl37 ENSDARG00000062916 1600 1.541 0.839 - - - - - 0.702 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
31. rac1 rac1 7341 1.532 - - - - - 0.709 0.823 - -
32. bysl ENSDARG00000001057 2621 1.524 0.792 - - - - - 0.732 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
33. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.524 - - - 0.716 - - - 0.808 - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
34. mrps18a ENSDARG00000024465 5187 1.514 - - - - - 0.763 0.751 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
35. polr2d ENSDARG00000076509 3386 1.514 0.801 - - - - - 0.713 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
36. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.511 0.770 - - - - - 0.741 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
37. gpatch11 ENSDARG00000026892 1360 1.505 - - - - - 0.720 0.785 - - G patch domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040718-89]
38. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 1.501 - - - - - - 0.720 0.781 - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
39. eif4h ENSDARG00000042252 6742 1.501 - - - - - 0.766 0.735 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
40. flot2a ENSDARG00000004830 5276 1.499 - - - - - 0.789 0.710 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
41. lypla2 ENSDARG00000053656 8971 1.498 0.742 - - - - - 0.756 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
42. mtpap ENSDARG00000076155, ENSDARG00000112828 272 1.497 - 0.719 - - - - - 0.778 - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
43. CR354611.2 CR354611.2 2040 1.496 - - - - - 0.788 0.708 - -
44. dnajc5ga ENSDARG00000041896 1478 1.496 - 0.755 - - - - 0.741 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
45. atpif1b 8625 1.493 - - - - - 0.750 0.743 - - ATPase inhibitory factor 1b
46. eif3ha ENSDARG00000102452 9238 1.491 - - - - - 0.772 0.719 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
47. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.491 - - - - - 0.736 0.755 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
48. zgc:193541 ENSDARG00000092873 21276 1.489 - - - - - 0.742 0.747 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
49. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.484 - 0.720 - - - - 0.764 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
50. plcg1 ENSDARG00000038442 5324 1.478 - - - - - 0.753 0.725 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
51. mllt4 mllt4 2939 1.467 0.751 - - - - - 0.716 - -
52. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.466 - - - - - 0.702 0.764 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
53. ash2l ENSDARG00000060392 4916 1.453 - - - - - 0.737 0.716 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
54. ubap2 ubap2 4167 1.453 - - - - - 0.738 0.715 - -
55. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.45 - - - - - 0.740 0.710 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
56. thoc5 ENSDARG00000038290 1489 1.443 - - - - - 0.701 0.742 - - THO complex 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3789]
57. gars ENSDARG00000059070 17015 1.441 - - - - - 0.717 0.724 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
58. ift27 ENSDARG00000099279 393 1.435 - - - - - - 0.703 0.732 - intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9]
59. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.427 - - - - - 0.716 0.711 - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
60. lpl ENSDARG00000087697 2578 1.427 0.710 - - - - 0.717 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
61. h2afy2_1 ENSDARG00000087897 9887 1.425 0.707 - - - - - 0.718 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
62. nup188 ENSDARG00000030022 2398 1.422 - 0.709 - - - - 0.713 - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
63. fam13a ENSDARG00000075564 1905 1.411 - - - - - 0.703 0.708 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
64. cdk16 ENSDARG00000032072 1993 1.407 - - - 0.706 - - 0.701 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
65. ankrd10b ENSDARG00000004771 654 0.965 0.965 - - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
66. CARKD 1398 0.96 0.960 - - - - - - - - carbohydrate kinase domain containing, transcript variant X7
67. pdrg1 ENSDARG00000045017 628 0.959 0.959 - - - - - - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
68. SPAG5 SPAG5 1117 0.957 0.957 - - - - - - - -
69. efnb2b ENSDARG00000074050 77 0.956 0.956 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
70. siae ENSDARG00000040527, ENSDARG00000111850 186 0.955 0.955 - - - - - - - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
71. terfa ENSDARG00000039302 779 0.954 0.954 - - - - - - - - telomeric repeat binding factor a [Source:ZFIN;Acc:ZDB-GENE-020419-38]
72. swt1 ENSDARG00000094010 472 0.953 0.953 - - - - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
73. chmp3 ENSDARG00000038064 577 0.952 0.952 - - - - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
74. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.952 0.952 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
75. mybl2 mybl2 1341 0.952 0.952 - - - - - - - -
76. MRPL52 ENSDARG00000090568 4402 0.951 0.951 - - - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
77. st8sia6 ENSDARG00000021195 2244 0.951 0.951 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
78. cib1 ENSDARG00000103118 291 0.951 0.951 - - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
79. lzic ENSDARG00000055899 638 0.95 0.950 - - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
80. actr5 ENSDARG00000098235 237 0.95 0.950 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
81. grp ENSDARG00000043074 747 0.95 0.950 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
82. kif1b ENSDARG00000037020 2124 0.949 0.949 - - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
83. gdap1l1 ENSDARG00000028628 233 0.949 0.949 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
84. C6H6orf106 C6H6orf106 2940 0.949 0.949 - - - - - - - -
85. tax1bp3 ENSDARG00000059177 4324 0.949 0.949 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
86. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.949 0.949 - - - - - - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
87. fam155a ENSDARG00000075858 91 0.948 0.948 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
88. commd2 ENSDARG00000003373 540 0.948 0.948 - - - - - - - - COMM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-118]
89. PTPDC1 PTPDC1 30 0.948 0.948 - - - - - - - -
90. pycr1 pycr1 1258 0.948 0.948 - - - - - - - -
91. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.948 0.948 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
92. ing5a ENSDARG00000022413 268 0.948 0.948 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
93. si:ch211-157l15.4 si:ch211-157l15.4 92 0.948 0.948 - - - - - - - -
94. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.948 0.948 - - - - - - - -
95. si:ch211-270n8.3 87 0.947 0.947 - - - - - - - - si:ch211-270n8.3, transcript variant X2
96. sema3d ENSDARG00000017369 212 0.947 0.947 - - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
97. kifc3 ENSDARG00000054978 1220 0.947 0.947 - - - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
98. ugt5b4 ENSDARG00000091916 130 0.947 0.947 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
99. trim25l ENSDARG00000020863 292 0.947 0.947 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
100. C2H7orf25 C2H7orf25 209 0.946 0.946 - - - - - - - -

There are 1246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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