Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ltv1

Gene Name Gene ID Reads Annotation
ltv1 ENSDARG00000008490 2403 LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]










Genes with expression patterns similar to ltv1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ltv1 ENSDARG00000008490 2403 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
2. C22H19orf70 C22H19orf70 4393 1.883 - 0.886 - - - - - - 0.997
3. CDCA4 ENSDARG00000042319 7918 1.803 - 0.848 - - - - - - 0.955 cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
4. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.787 - 0.918 - - - - - - 0.869
5. RUNDC1 ENSDARG00000091962 693 1.786 - - - - - 0.787 - - 0.999 RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
6. znf346 ENSDARG00000060695 3942 1.781 - 0.856 - - - - 0.925 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
7. efr3bb 1533 1.774 - - - - - 0.775 - - 0.999 EFR3 homolog Bb (S. cerevisiae), transcript variant X2
8. pl10 pl10 10795 1.752 - - - - - - 0.777 - 0.975
9. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.743 - 0.916 - - - - 0.827 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
10. eif2s1b ENSDARG00000052178 11961 1.742 - - - - - - 0.792 - 0.950 eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
11. mrpl34 ENSDARG00000092954 2052 1.734 - 0.890 - - - - 0.844 - - mitochondrial ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-070912-582]
12. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.721 - - - - - - 0.724 - 0.997 casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
13. sdhb ENSDARG00000075768 5493 1.691 - - - - - - 0.700 - 0.991 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
14. NRAP ENSDARG00000009341 3565 1.687 0.702 - - - - - - - 0.985 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
15. acap3a ENSDARG00000075990 9652 1.685 - - - - - - 0.702 - 0.983 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
16. ndufv1 ENSDARG00000036438 8437 1.666 0.776 0.890 - - - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
17. vgll4b ENSDARG00000103730 5266 1.665 - 0.874 - - - - 0.791 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
18. atp5ia 4773 1.652 - 0.859 - - - - 0.793 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
19. Sep-02 Sep-02 10074 1.646 - 0.898 - - - - 0.748 - -
20. srp54 ENSDARG00000098367 2301 1.638 - 0.913 - - - - 0.725 - - signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]
21. uba1 ENSDARG00000037559 11579 1.637 0.711 - - - - - - - 0.926 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
22. srpr 5148 1.635 - 0.812 - - - 0.823 - - - signal recognition particle receptor (docking protein)
23. otub1b ENSDARG00000011462 4329 1.621 - 0.913 - - - - 0.708 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
24. caprin1b ENSDARG00000054272 7033 1.616 - 0.815 - - - - 0.801 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
25. ckba ENSDARG00000069752 2002 1.586 - 0.854 - - - 0.732 - - - creatine kinase, brain a [Source:ZFIN;Acc:ZDB-GENE-060929-902]
26. fkbp1aa ENSDARG00000022684 74052 1.581 - - - - - - 0.781 - 0.800 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
27. derl1 ENSDARG00000021905 4698 1.578 - 0.852 - - - - 0.726 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
28. stip1 ENSDARG00000004906 7742 1.577 - 0.770 - - - - 0.807 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
29. psma4 ENSDARG00000045928 5112 1.567 - 0.864 - - - - 0.703 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
30. lmnb1 ENSDARG00000044299 9817 1.563 - 0.847 - - - - 0.716 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
31. fzd1 ENSDARG00000106062 1581 1.56 - 0.855 - - - 0.705 - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
32. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.556 - 0.856 - - - - 0.700 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
33. mxd3 ENSDARG00000098350 3040 1.554 - 0.848 - - - - 0.706 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
34. ube2v2 ENSDARG00000028198 23341 1.517 - 0.808 - - - - 0.709 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
35. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.499 - 0.782 - - - - 0.717 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
36. tcp11l2 ENSDARG00000027316 1906 1.483 - - - - - 0.743 0.740 - - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
37. kazald3 ENSDARG00000053509 513 1.479 - - - - - 0.744 0.735 - - Kazal-type serine peptidase inhibitor domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-155]
38. mdh2 ENSDARG00000043371 14485 1.459 0.703 - - - - - 0.756 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
39. rhoub ENSDARG00000012968 1143 1.454 - - - - - 0.738 0.716 - - ras homolog family member Ub [Source:ZFIN;Acc:ZDB-GENE-050417-308]
40. myf6 ENSDARG00000029830 1911 1.449 0.740 - - - - - 0.709 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
41. larsb ENSDARG00000019280 3924 1.41 0.709 - - - - - 0.701 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
42. RNF145 RNF145 1364 0.999 - - - - - - - - 0.999
43. dctn5 ENSDARG00000003573 1100 0.999 - - - - - - - - 0.999 dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
44. psmd4a ENSDARG00000101295 1410 0.999 - - - - - - - - 0.999 proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
45. zcchc9 ENSDARG00000007531 1748 0.999 - - - - - - - - 0.999 zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
46. rab42a ENSDARG00000034215 692 0.999 - - - - - - - - 0.999 RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
47. U2_6 U2_6 1155 0.999 - - - - - - - - 0.999
48. CABZ01049362.1 ENSDARG00000099508 570 0.999 - - - - - - - - 0.999
49. kctd1 ENSDARG00000074056 652 0.999 - - - - - - - - 0.999 potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
50. mboat2b ENSDARG00000042551 910 0.999 - - - - - - - - 0.999 membrane bound O-acyltransferase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-185]
51. rccd1 ENSDARG00000071074 560 0.999 - - - - - - - - 0.999 RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
52. zgpat ENSDARG00000027403 1071 0.999 - - - - - - - - 0.999 zinc finger, CCCH-type with G patch domain [Source:ZFIN;Acc:ZDB-GENE-040426-1248]
53. wrnip1 ENSDARG00000005218 695 0.999 - - - - - - - - 0.999 Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
54. lin7a ENSDARG00000013414 1589 0.999 - - - - - - - - 0.999 lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
55. fam49a ENSDARG00000006672 939 0.999 - - - - - - - - 0.999 family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
56. ARSJ ENSDARG00000077590 684 0.999 - - - - - - - - 0.999 arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
57. clpp ENSDARG00000020679 2125 0.999 - - - - - - - - 0.999 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
58. mterfd3 mterfd3 1004 0.999 - - - - - - - - 0.999
59. fam96b 2255 0.999 - - - - - - - - 0.999 family with sequence similarity 96, member B
60. pcyt1bb ENSDARG00000104207 1204 0.999 - - - - - - - - 0.999 phosphate cytidylyltransferase 1, choline, beta b [Source:ZFIN;Acc:ZDB-GENE-051120-48]
61. dis3l2 ENSDARG00000033259 1509 0.999 - - - - - - - - 0.999 DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
62. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.999 - - - - - - - - 0.999 carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
63. nolc1 ENSDARG00000024561 3457 0.998 - - - - - - - - 0.998 nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
64. kif2c ENSDARG00000076228 2281 0.998 - - - - - - - - 0.998 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
65. grin1a ENSDARG00000027828 1327 0.998 - - - - - - - - 0.998 glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
66. ppp2r2a ppp2r2a 5785 0.998 - - - - - - - - 0.998
67. zgc:123105 ENSDARG00000003127 3061 0.998 - - - - - - - - 0.998 zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
68. AP3B1 2363 0.998 - - - - - - - - 0.998 adaptor related protein complex 3 beta 1 subunit
69. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 0.998 - - - - - - - - 0.998 zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
70. ptpn21 ENSDARG00000062248 2010 0.998 - - - - - - - - 0.998 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
71. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.998 - - - - - - - - 0.998 Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
72. pygo2 ENSDARG00000036772 2510 0.998 - - - - - - - - 0.998 pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
73. ISCU ISCU 3648 0.998 - - - - - - - - 0.998
74. CU929052.1 CU929052.1 642 0.998 - - - - - - - - 0.998
75. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.997 - - - - - - - - 0.997 translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
76. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.996 - - - - - - - - 0.996 protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
77. svilb ENSDARG00000014651 4449 0.996 - - - - - - - - 0.996 supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
78. ndrg3a ENSDARG00000013087 5581 0.996 - - - - - - - - 0.996 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
79. pitx2 ENSDARG00000036194 2279 0.995 - - - - - - - - 0.995 paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
80. shfm1 7620 0.995 - - - - - - - - 0.995 split hand/foot malformation (ectrodactyly) type 1
81. MRPL21 ENSDARG00000003846 3244 0.994 - - - - - - - - 0.994 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
82. dnmt1 ENSDARG00000030756 2741 0.994 - - - - - - - - 0.994 DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
83. samm50 ENSDARG00000045814 4511 0.993 - - - - - - - - 0.993 SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
84. api5 ENSDARG00000033597 6655 0.992 - - - - - - - - 0.992 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
85. si:dkey-42i9.4 ENSDARG00000008049 4752 0.992 - - - - - - - - 0.992 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
86. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 0.992 - - - - - - - - 0.992 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
87. CD99L2 ENSDARG00000056722 5588 0.991 - - - - - - - - 0.991 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
88. tead1a ENSDARG00000028159 3574 0.99 - - - - - - - - 0.990 TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
89. rad21a_1 ENSDARG00000006092 4482 0.988 - - - - - - - - 0.988 RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
90. dtnba ENSDARG00000077694 5483 0.988 - - - - - - - - 0.988 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
91. BX539313.4 BX539313.4 1858 0.988 - - - - - - - - 0.988
92. zgc:55512 zgc:55512 4436 0.986 - - - - - - - - 0.986
93. ube2e1 ENSDARG00000116649 10656 0.986 - - - - - - - - 0.986 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
94. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 0.985 - - - - - - - - 0.985 synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
95. id4 ENSDARG00000045131 2916 0.984 - - - - - - - - 0.984 inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
96. znf395a ENSDARG00000060113 3874 0.984 - - - - - - - - 0.984 zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
97. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 0.984 - - - - - - - - 0.984 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
98. pdia5 ENSDARG00000069242 3576 0.984 - - - - - - - - 0.984 protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
99. NDUFC2 ENSDARG00000102115 7848 0.983 - - - - - - - - 0.983 NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
100. cers2b ENSDARG00000058992 5319 0.983 - - - - - - - - 0.983 ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]

There are 836 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA