Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lta

Gene Name Gene ID Reads Annotation
lta ENSDARG00000020483 7 lymphotoxin alpha (TNF superfamily, member 1) [Source:ZFIN;Acc:ZDB-GENE-050601-3]










Genes with expression patterns similar to lta

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lta ENSDARG00000020483 7 2 1.000 - - - 1.000 - - - - lymphotoxin alpha (TNF superfamily, member 1) [Source:ZFIN;Acc:ZDB-GENE-050601-3]
2. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1.9 0.939 - - - 0.961 - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
3. tmem200a ENSDARG00000031540 52 1.779 0.821 - - - 0.958 - - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
4. SNX20 ENSDARG00000045554 77 1.566 0.849 - - - 0.717 - - - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
5. TNFRSF25 TNFRSF25 6 1 1.000 - - - - - - - -
6. CU681840.1 CU681840.1 3 1 - - - - 1.000 - - - -
7. BPHL ENSDARG00000102877 28 1 - - - - 1.000 - - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
8. VGLL2 VGLL2 13 1 - - - - 1.000 - - - -
9. brpf3 brpf3 15 1 - - - - 1.000 - - - -
10. CABZ01023255.1 ENSDARG00000099984 13 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
11. TNNI1 TNNI1 4 1 - - - - 1.000 - - - -
12. AL929134.2 AL929134.2 5 1 - - - - 1.000 - - - -
13. AC024175.9 AC024175.9 56 1 - - - - 1.000 - - - -
14. ccl20 ccl20 2 1 - - - - 1.000 - - - -
15. fgl2b ENSDARG00000019686 6 1 - - - - 1.000 - - - - fibrinogen-like 2b [Source:ZFIN;Acc:ZDB-GENE-120709-53]
16. CR450736.2 CR450736.2 5 1 - - - - 1.000 - - - -
17. sbno1 ENSDARG00000099080 10 1 - - - - 1.000 - - - - strawberry notch homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080522-2]
18. nisch ENSDARG00000043077 11 1 - - - - 1.000 - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
19. meis2a ENSDARG00000098240 5 1 - - - - 1.000 - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
20. HMHA1_1 HMHA1_1 2 1 - - - - 1.000 - - - -
21. MAMDC4 MAMDC4 3 1 - - - - 1.000 - - - -
22. ttc6 ENSDARG00000104125 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
23. cox5aa ENSDARG00000088383 21 1 - - - - 1.000 - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
24. BX323444.2 ENSDARG00000117710 13 1 - - - - 1.000 - - - -
25. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1 - - - - 1.000 - - - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
26. CU234171.2 CU234171.2 86 0.991 0.991 - - - - - - - -
27. slc9a3.1 ENSDARG00000058498 46 0.991 0.991 - - - - - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
28. adcy3b ENSDARG00000017437 8 0.99 - - - - 0.990 - - - - adenylate cyclase 3b [Source:ZFIN;Acc:ZDB-GENE-041014-276]
29. vwc2 ENSDARG00000076495 22 0.987 - - - - 0.987 - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
30. si:dkey-217f16.1 ENSDARG00000089602 17 0.987 - - - - 0.987 - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
31. FP102191.1 FP102191.1 21 0.986 - - - - 0.986 - - - -
32. CU459081.1 CU459081.1 15 0.984 - - - - 0.984 - - - -
33. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.98 0.980 - - - - - - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
34. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.978 0.978 - - - - - - - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
35. henmt1 ENSDARG00000018871 46 0.978 - - - - 0.978 - - - - HEN methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-387]
36. zgc:111991 zgc:111991 159 0.974 0.974 - - - - - - - -
37. ppp1r8 ppp1r8 310 0.974 0.974 - - - - - - - -
38. si:dkey-3d18.4 si:dkey-3d18.4 43 0.97 0.970 - - - - - - - -
39. HUS1 ENSDARG00000101611 187 0.967 0.967 - - - - - - - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
40. si:dkey-23a23.3 ENSDARG00000088214 86 0.967 0.967 - - - - - - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
41. si:dkey-10g2.5 si:dkey-10g2.5 72 0.966 - - - - 0.966 - - - -
42. FAM69A FAM69A 28 0.964 - - - - 0.964 - - - -
43. rpgra ENSDARG00000056617 77 0.961 0.961 - - - - - - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
44. bik ENSDARG00000045549 18 0.952 - - - - 0.952 - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
45. si:dkey-192i18.3 si:dkey-192i18.3 47 0.951 0.951 - - - - - - - -
46. STK31 ENSDARG00000056339 37 0.95 - - - - 0.950 - - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
47. FBXL7 ENSDARG00000062251 179 0.949 0.949 - - - - - - - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
48. exoc8 ENSDARG00000063211 35 0.948 - - - - 0.948 - - - - exocyst complex component 8 [Source:ZFIN;Acc:ZDB-GENE-070410-60]
49. U2_4 U2_4 41 0.945 - - - - 0.945 - - - -
50. RNF14_3 RNF14_3 15 0.944 - - - - 0.944 - - - -
51. zgc:154075 ENSDARG00000067630 284 0.944 0.944 - - - - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
52. wu:fd55e03 wu:fd55e03 41 0.941 - - - - 0.941 - - - -
53. CABZ01058107.1 ENSDARG00000112826 8 0.941 - - - - 0.941 - - - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
54. dennd2db ENSDARG00000030250 24 0.94 - - - - 0.940 - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
55. trim62 ENSDARG00000060901 12 0.939 0.939 - - - - - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
56. cd79b ENSDARG00000104691 5 0.939 0.939 - - - - - - - - CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
57. C11H3orf14 C11H3orf14 15 0.939 0.939 - - - - - - - -
58. si:ch211-204c5.6 si:ch211-204c5.6 7 0.939 0.939 - - - - - - - -
59. si:dkey-47k20.8 ENSDARG00000035214 4 0.939 0.939 - - - - - - - - si:dkey-47k20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-359]
60. CU694807.2 CU694807.2 5 0.939 0.939 - - - - - - - -
61. atoh1c ENSDARG00000039602 4 0.939 0.939 - - - - - - - - atonal bHLH transcription factor 1c [Source:ZFIN;Acc:ZDB-GENE-090805-1]
62. C3H17orf104 C3H17orf104 16 0.939 0.939 - - - - - - - -
63. CU856140.1 CU856140.1 4316 0.939 0.939 - - - - - - - -
64. pcsk5a ENSDARG00000067537 44 0.939 0.939 - - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
65. ppa1a ENSDARG00000099933 31 0.939 0.939 - - - - - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
66. CABZ01068324.1 CABZ01068324.1 4 0.939 0.939 - - - - - - - -
67. si:ch211-265m20.8 120 0.939 0.939 - - - - - - - - si:ch211-265m20.8, transcript variant X1
68. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 0.939 0.939 - - - - - - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
69. zgc:173594 57 0.939 0.939 - - - - - - - - zgc:173594
70. si:ch211-161h7.8 ENSDARG00000089919 60 0.939 0.939 - - - - - - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
71. CR631122.1 ENSDARG00000044534 8 0.939 0.939 - - - - - - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
72. CABZ01055343.1 CABZ01055343.1 12 0.939 0.939 - - - - - - - -
73. Vault_1 Vault_1 6 0.939 0.939 - - - - - - - -
74. ptger1b ENSDARG00000104847 91 0.939 0.939 - - - - - - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
75. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 0.939 0.939 - - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
76. si:dkeyp-9d4.2 ENSDARG00000029720 9 0.939 0.939 - - - - - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
77. CABZ01059408.1 ENSDARG00000116928 24 0.939 0.939 - - - - - - - -
78. foxp3a ENSDARG00000055750 15 0.939 0.939 - - - - - - - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
79. si:ch73-91k6.1 18 0.939 0.939 - - - - - - - - si:ch73-91k6.1
80. entpd8 ENSDARG00000005565 18 0.939 0.939 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
81. zgc:172133 ENSDARG00000075248 6 0.939 0.939 - - - - - - - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
82. SLC7A8 SLC7A8 25 0.939 0.939 - - - - - - - -
83. RAP1GAP2 RAP1GAP2 52 0.939 0.939 - - - - - - - -
84. urgcp ENSDARG00000036767 6 0.939 0.939 - - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
85. avpr2aa ENSDARG00000007436 43 0.939 0.939 - - - - - - - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
86. sema4ga ENSDARG00000076595 24 0.939 0.939 - - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga [Source:ZFIN;Acc:ZDB-GENE-060503-381]
87. si:ch211-271e10.1 ENSDARG00000095735 15 0.939 0.939 - - - - - - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
88. si:ch211-179l5.6 si:ch211-179l5.6 33 0.939 0.939 - - - - - - - -
89. si:ch73-303g23.4 si:ch73-303g23.4 386 0.939 0.939 - - - - - - - -
90. fam26f 595 0.939 0.939 - - - - - - - - family with sequence similarity 26, member F
91. nefla ENSDARG00000057568 62 0.939 0.939 - - - - - - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
92. lctlb ENSDARG00000016337 35 0.939 0.939 - - - - - - - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
93. XCR1 XCR1 9 0.939 0.939 - - - - - - - -
94. cldn11a ENSDARG00000020031 284 0.939 0.939 - - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
95. zzef1 ENSDARG00000094380 4 0.939 0.939 - - - - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
96. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.939 0.939 - - - - - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
97. CABZ01060296.1 CABZ01060296.1 9 0.939 0.939 - - - - - - - -
98. BX511271.1 BX511271.1 22 0.939 0.939 - - - - - - - -
99. atoh1b ENSDARG00000099564 494 0.939 0.939 - - - - - - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
100. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 0.939 0.939 - - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA