Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsmd1

Gene Name Gene ID Reads Annotation
lsmd1 lsmd1 2227










Genes with expression patterns similar to lsmd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsmd1 lsmd1 2227 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zfand3 ENSDARG00000052833 2682 1.428 - - - - - - 0.723 0.705 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
3. cnppd1 ENSDARG00000027078 3778 0.999 - 0.999 - - - - - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
4. ptprmb ptprmb 1516 0.999 - 0.999 - - - - - - -
5. mt-nd6 ENSDARG00000063922 788 0.998 - 0.998 - - - - - - - NADH dehydrogenase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-13]
6. mob3a ENSDARG00000019113 2551 0.998 - 0.998 - - - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
7. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.998 - 0.998 - - - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
8. noc4l ENSDARG00000045565 1337 0.998 - 0.998 - - - - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
9. hoxc1a ENSDARG00000070337 1460 0.998 - 0.998 - - - - - - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
10. commd5 ENSDARG00000029660 517 0.998 - 0.998 - - - - - - - COMM domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040801-71]
11. txndc12 ENSDARG00000038980 795 0.998 - 0.998 - - - - - - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
12. HOMEZ HOMEZ 1824 0.998 - 0.998 - - - - - - -
13. twf2a ENSDARG00000094792 687 0.998 - 0.998 - - - - - - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
14. oraov1 497 0.998 - 0.998 - - - - - - - oral cancer overexpressed 1
15. utp18 ENSDARG00000102618 1983 0.998 - 0.998 - - - - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
16. lztfl1 ENSDARG00000105010 1697 0.998 - 0.998 - - - - - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
17. pus10 ENSDARG00000079973 637 0.998 - 0.998 - - - - - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]
18. BAX BAX 1673 0.998 - 0.998 - - - - - - -
19. mff ENSDARG00000053753 905 0.998 - 0.998 - - - - - - - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
20. E2F2 E2F2 871 0.998 - 0.998 - - - - - - -
21. hmp19 2554 0.998 - 0.998 - - - - - - - HMP19 protein
22. pdik1l ENSDARG00000056509 548 0.998 - 0.998 - - - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
23. CABZ01076275.1 ENSDARG00000100753 5137 0.998 - 0.998 - - - - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
24. map2 ENSDARG00000055052 6062 0.998 - 0.998 - - - - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
25. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 0.998 - 0.998 - - - - - - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
26. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.998 - 0.998 - - - - - - -
27. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 0.998 - 0.998 - - - - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
28. tsc2 ENSDARG00000103125 1403 0.998 - 0.998 - - - - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
29. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 0.997 - 0.997 - - - - - - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
30. cyt1 ENSDARG00000092947 1717 0.997 - 0.997 - - - - - - - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
31. cdh5 ENSDARG00000075549 2288 0.997 - 0.997 - - - - - - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
32. B3GNT2 B3GNT2 348 0.997 - 0.997 - - - - - - -
33. DENND4B ENSDARG00000102914 1001 0.997 - 0.997 - - - - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
34. GRAMD1C ENSDARG00000076238 795 0.997 - 0.997 - - - - - - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
35. mllt4 mllt4 2939 0.997 - 0.997 - - - - - - -
36. rnaseh2a ENSDARG00000018891 1979 0.997 - 0.997 - - - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
37. PRR5L PRR5L 408 0.997 - 0.997 - - - - - - -
38. si:ch211-286b5.5 ENSDARG00000096661 3136 0.997 - 0.997 - - - - - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
39. si:dkey-153m14.1 si:dkey-153m14.1 4591 0.997 - 0.997 - - - - - - -
40. calm1a ENSDARG00000021811 4791 0.997 - 0.997 - - - - - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
41. elnb ENSDARG00000069017 744 0.997 - 0.997 - - - - - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
42. mrps30 ENSDARG00000104111 2900 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
43. acsl1 acsl1 4216 0.997 - 0.997 - - - - - - -
44. aurka ENSDARG00000012485 3304 0.997 - 0.997 - - - - - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
45. hmcn1 ENSDARG00000016936 1706 0.997 - 0.997 - - - - - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
46. IM:7163548 IM:7163548 6540 0.997 - 0.997 - - - - - - -
47. IL17RD ENSDARG00000098359 2309 0.996 - 0.996 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
48. ENSDARG00000087348 ENSDARG00000087348 2870 0.996 - 0.996 - - - - - - -
49. samhd1 ENSDARG00000071288 1279 0.996 - 0.996 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
50. dpy30 ENSDARG00000004427 7112 0.996 - 0.996 - - - - - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
51. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 0.996 - 0.996 - - - - - - - ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
52. mir205 2147 0.996 - 0.996 - - - - - - - microRNA 205
53. wnt5b ENSDARG00000102464 1662 0.995 - 0.995 - - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
54. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 0.995 - 0.995 - - - - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
55. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.995 - 0.995 - - - - - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
56. tusc2b ENSDARG00000025340 2391 0.995 - 0.995 - - - - - - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
57. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 0.994 - 0.994 - - - - - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
58. mrps6 ENSDARG00000039543 1892 0.994 - 0.994 - - - - - - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
59. cox6a1 ENSDARG00000022438 18811 0.994 - 0.994 - - - - - - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
60. nufip2 ENSDARG00000069066 3965 0.994 - 0.994 - - - - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
61. ppapdc3 ppapdc3 4924 0.993 - 0.993 - - - - - - -
62. zgc:91910 ENSDARG00000035678 6172 0.993 - 0.993 - - - - - - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
63. metap2b_1 ENSDARG00000102571 5507 0.993 - 0.993 - - - - - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
64. myoz1b ENSDARG00000071445 13381 0.992 - 0.992 - - - - - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
65. nxf1 ENSDARG00000055076 3251 0.992 - 0.992 - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
66. zgc:63587 ENSDARG00000017140 8399 0.992 - 0.992 - - - - - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
67. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 0.991 - 0.991 - - - - - - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
68. matn4 ENSDARG00000015947 10967 0.991 - 0.991 - - - - - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
69. ppp1r12a ENSDARG00000010784 4333 0.99 - 0.990 - - - - - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
70. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 0.99 - 0.990 - - - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
71. msi2b ENSDARG00000032614 3095 0.99 - 0.990 - - - - - - - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
72. capzb ENSDARG00000100252 10444 0.99 - 0.990 - - - - - - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
73. pvalb4 ENSDARG00000024433 35736 0.989 - 0.989 - - - - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
74. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 0.989 - 0.989 - - - - - - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
75. GCA GCA 5211 0.989 - 0.989 - - - - - - -
76. col4a5 ENSDARG00000052063 19251 0.987 - 0.987 - - - - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
77. jun ENSDARG00000043531 3385 0.986 - 0.986 - - - - - - - Jun proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7859]
78. perp ENSDARG00000063572 6423 0.985 - 0.985 - - - - - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
79. yif1a ENSDARG00000019636 2215 0.985 - 0.985 - - - - - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
80. phb ENSDARG00000057414 9551 0.984 - 0.984 - - - - - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
81. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.982 - 0.982 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
82. TEAD3 TEAD3 8614 0.979 - 0.979 - - - - - - -
83. eif3g ENSDARG00000016889 10367 0.975 - 0.975 - - - - - - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
84. mapre1b ENSDARG00000002659 9119 0.972 - 0.972 - - - - - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
85. cpsf3 ENSDARG00000027649 6897 0.972 - 0.972 - - - - - - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
86. slc7a3a ENSDARG00000020645 1458 0.971 - 0.971 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
87. stambpl1 ENSDARG00000003085 665 0.97 - 0.970 - - - - - - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]
88. wasla ENSDARG00000014113, ENSDARG00000113629, ENSDARG00000115471 1529 0.97 - 0.970 - - - - - - - Wiskott-Aldrich syndrome-like a [Source:ZFIN;Acc:ZDB-GENE-070209-220]
89. si:dkeyp-12a9.5 3058 0.97 - 0.970 - - - - - - - si:dkeyp-12a9.5
90. pam ENSDARG00000100170 2442 0.969 - 0.969 - - - - - - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
91. apmap ENSDARG00000017422 2692 0.969 - 0.969 - - - - - - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
92. INCENP 1189 0.967 - 0.967 - - - - - - - inner centromere protein
93. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.965 - 0.965 - - - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
94. zgc:158387 zgc:158387 9147 0.964 - 0.964 - - - - - - -
95. WIPF2 WIPF2 3171 0.96 - 0.960 - - - - - - -
96. sox6 ENSDARG00000015536 7728 0.959 - 0.959 - - - - - - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
97. KANSL1_1 KANSL1_1 1809 0.945 - 0.945 - - - - - - -
98. smyd1a ENSDARG00000009280 1503 0.944 - 0.944 - - - - - - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
99. NDUFB1 ENSDARG00000087456 8270 0.943 - 0.943 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
100. odc1 ENSDARG00000007377 8957 0.943 - 0.943 - - - - - - - ornithine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-010816-1]

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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