Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lsm14ab

Gene Name Gene ID Reads Annotation
lsm14ab ENSDARG00000100553 3837 LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]










Genes with expression patterns similar to lsm14ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm14ab ENSDARG00000100553 3837 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
2. thoc7 ENSDARG00000015394 3824 3.242 0.708 - - 0.991 - - 0.767 - 0.776 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
3. emc6 ENSDARG00000035282 4981 2.707 - - - 0.988 - - - 0.803 0.916 ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
4. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.624 - - - 0.985 - 0.791 0.848 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
5. SENP1 SENP1 1122 2.581 - - - - 0.953 0.775 - 0.853 -
6. kdm1a ENSDARG00000060679 6152 2.536 - - - - 0.918 - 0.767 0.851 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
7. taf10 ENSDARG00000068641 3333 2.519 - - - 0.987 - - 0.766 - 0.766 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
8. znf865 ENSDARG00000036698 15532 2.488 - - - - 0.912 0.710 0.866 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
9. axin2 ENSDARG00000100149 4223 2.456 - - - - 0.925 - - 0.817 0.714 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
10. meis3 ENSDARG00000002795 2509 2.404 - - - 0.991 - 0.705 0.708 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
11. eif3m ENSDARG00000013931 8117 2.399 - - - - 0.840 - 0.745 - 0.814 eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
12. lrrc40 ENSDARG00000017708 1156 2.361 - - - - 0.869 - 0.761 0.731 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
13. pank1b ENSDARG00000010098 3202 2.357 - - - - 0.841 - 0.746 - 0.770 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
14. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.357 0.715 - - - - 0.786 0.856 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
15. kpnb3 ENSDARG00000040245 7967 2.348 - - - - - 0.710 0.763 - 0.875 karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
16. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.34 - - - - - - 0.758 0.835 0.747 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
17. hnrnpul1 ENSDARG00000040564 6550 2.339 0.739 - - 0.832 - - - 0.768 - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
18. smarcd1 ENSDARG00000019004 6028 2.288 - 0.811 - - - 0.737 0.740 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
19. cltcb ENSDARG00000090716 5544 2.287 - 0.717 - - - - 0.758 - 0.812 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
20. prrg4 ENSDARG00000030753 1008 2.253 - 0.725 - - - - - 0.787 0.741 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
21. ubap2 ubap2 4167 2.216 - 0.766 0.732 - - - - 0.718 -
22. actr1 ENSDARG00000011611 3879 2.187 - - - - - 0.758 0.705 0.724 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
23. znf292b ENSDARG00000043973 3791 2.167 - 0.708 - - - 0.706 0.753 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
24. qdpra ENSDARG00000040190 4064 2.132 - - - - - - 0.710 0.701 0.721 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
25. GRAMD4 GRAMD4 1967 1.846 - - - - 0.948 - - - 0.898
26. capn2b ENSDARG00000055592 5431 1.835 - - - 0.985 0.850 - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
27. psmc5 ENSDARG00000015315 8458 1.826 - 0.877 - - 0.949 - - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
28. wu:fb17g07 wu:fb17g07 10567 1.819 - - - 0.980 - - 0.839 - -
29. ZNF628 1104 1.818 - - - 0.996 - - - 0.822 - zinc finger protein 628, transcript variant X3
30. pias4a ENSDARG00000007081 4264 1.8 - - - - 0.962 0.838 - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
31. h1fx ENSDARG00000054058 4075 1.798 - 0.861 - - 0.937 - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
32. nckap1 ENSDARG00000060853 3540 1.79 - - - - 0.932 - - - 0.858 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
33. prmt1 ENSDARG00000010246 11311 1.778 - - - 0.904 - - - 0.874 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
34. mapre1b ENSDARG00000002659 9119 1.777 - - - 0.972 - 0.805 - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
35. nucks1b ENSDARG00000012777 4468 1.767 - - - 0.992 - - - - 0.775 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
36. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.755 - - - 0.982 - - 0.773 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
37. zic5 ENSDARG00000016022 1034 1.749 - - - - 0.945 - - 0.804 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
38. prdm16 prdm16 1346 1.744 - - - - 0.955 - 0.789 - -
39. mrrf ENSDARG00000034174, ENSDARG00000115754 791 1.741 - - - - 0.946 - - 0.795 - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
40. marcksa ENSDARG00000004049 2518 1.727 - - - - 0.954 - 0.773 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
41. nuf2 ENSDARG00000034624 2252 1.727 - - - - 0.960 - 0.767 - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
42. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.726 - - - - 0.951 - 0.775 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
43. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.726 - - - - 0.955 - 0.771 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
44. eif5b ENSDARG00000016548 3972 1.726 - - - - 0.919 - 0.807 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
45. dhfr ENSDARG00000004251 1824 1.725 - - - - 0.947 - 0.778 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
46. lig3 ENSDARG00000052553 2665 1.721 - - - 0.992 - - 0.729 - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
47. piezo1 ENSDARG00000076870 4704 1.72 - 0.728 - 0.992 - - - - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
48. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.72 - - - - - - 0.867 0.853 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
49. G3BP2 ENSDARG00000014790 9380 1.715 - - - - 0.934 0.781 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
50. C24H17orf96 C24H17orf96 1538 1.715 - - - - 0.969 - 0.746 - -
51. sin3b ENSDARG00000062472 2025 1.714 - - - - 0.958 0.756 - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
52. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.711 - - - - 0.957 - - 0.754 - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
53. ddi2 ENSDARG00000006477 4190 1.707 - 0.766 - - 0.941 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
54. fen1 ENSDARG00000011404 3358 1.704 - - - - 0.953 - 0.751 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
55. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.703 0.747 - - - 0.956 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
56. ypel5 ENSDARG00000088929 1011 1.702 - - - - 0.951 - - - 0.751 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
57. sncb ENSDARG00000104945 8197 1.702 - - - 0.986 - - - 0.716 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
58. TRAPPC10 ENSDARG00000098118 954 1.695 - - - - 0.942 - - - 0.753 trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
59. FP245444.1 FP245444.1 1922 1.693 - - - - 0.959 0.734 - - -
60. nup50 ENSDARG00000017454 4425 1.692 - - - - 0.960 - - 0.732 - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
61. supt16h ENSDARG00000079949 4755 1.691 - - - 0.980 - - 0.711 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
62. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.688 - 0.753 - - 0.935 - - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
63. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.687 - - - - - 0.786 - 0.901 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
64. katnbl1 ENSDARG00000042522 1086 1.687 - - - - 0.951 - 0.736 - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
65. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.687 - - - - 0.949 0.738 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
66. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.684 - - - - 0.951 - 0.733 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
67. rpl7l1 ENSDARG00000042864 3256 1.683 - - - - 0.839 - - 0.844 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
68. cuedc2 ENSDARG00000039365 484 1.682 - - - - 0.948 - - 0.734 - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
69. atf7ip ENSDARG00000069619 5495 1.681 - - - - - - 0.783 0.898 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
70. pygo2 ENSDARG00000036772 2510 1.678 - - - - 0.871 0.807 - - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
71. smo ENSDARG00000002952 6411 1.675 - - - - 0.949 - 0.726 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
72. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.674 - - - - - 0.844 - 0.830 - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
73. gatad2ab ENSDARG00000006192 2461 1.671 - - - - 0.936 - 0.735 - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
74. stmn1a ENSDARG00000004169 21169 1.671 - - - 0.944 - - 0.727 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
75. zgc:55733 ENSDARG00000103845 1550 1.669 - - - - - - 0.823 0.846 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
76. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.666 - - - - 0.953 - 0.713 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
77. pip5k2 pip5k2 5743 1.66 - - - - 0.901 0.759 - - -
78. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.66 - - - - - - 0.805 0.855 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
79. ing5b ENSDARG00000068175 2502 1.659 - - - - 0.912 - - - 0.747 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
80. nxf1 ENSDARG00000055076 3251 1.657 - - - - 0.945 - 0.712 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
81. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.657 - - - - 0.939 0.718 - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
82. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.655 - - - - 0.937 0.718 - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
83. hmgb2b ENSDARG00000053990 11519 1.653 - - - 0.947 0.706 - - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
84. spag7 ENSDARG00000011555 3224 1.651 - - - - 0.945 - - 0.706 - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
85. slc35b4 ENSDARG00000071087 1030 1.649 - 0.778 - - - - - 0.871 - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
86. exoc3l4 ENSDARG00000058180 923 1.649 - - - - 0.948 - 0.701 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
87. nsd1a ENSDARG00000060016 2974 1.629 - - - - - 0.723 - 0.906 - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
88. ss18 ENSDARG00000002970 2618 1.623 - - - - - 0.848 - - 0.775 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
89. uba1 ENSDARG00000037559 11579 1.62 - 0.824 - - - - 0.796 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
90. h2afx ENSDARG00000029406 2116 1.62 - - - - 0.918 0.702 - - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
91. itm2ba ENSDARG00000007098 5686 1.614 - - - - 0.847 - - - 0.767 integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
92. C1H4orf27 C1H4orf27 1961 1.613 - - - - - 0.781 - 0.832 -
93. ZNF618 ENSDARG00000071469 2347 1.608 - - - - - - 0.771 0.837 - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
94. snrpd3l ENSDARG00000076283 7655 1.608 - - - - 0.813 - 0.795 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
95. hmg20a ENSDARG00000031198 1763 1.604 - - - - 0.848 - 0.756 - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
96. ctbp2 ctbp2 3255 1.603 - - - - - - 0.901 - 0.702
97. e2f7 ENSDARG00000008986 1439 1.601 - - - - - 0.759 - 0.842 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
98. nr2f1a ENSDARG00000052695 5037 1.599 0.714 - - - 0.885 - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
99. sumo3a ENSDARG00000028119 13447 1.598 0.787 - - - - - 0.811 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
100. TNRC6A ENSDARG00000079688 14433 1.597 - - - - - 0.733 0.864 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]

There are 1809 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA