Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm12a

Gene Name Gene ID Reads Annotation
lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]










Genes with expression patterns similar to lsm12a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
2. tmem104 ENSDARG00000088560 859 1.971 - - - - - - 0.997 0.974 - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
3. fkbp8 ENSDARG00000001734 1709 1.965 - - - - - - 0.991 0.974 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
4. nf2b ENSDARG00000025567 1441 1.956 - - - - - - 0.976 0.980 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
5. atp2a3 ENSDARG00000060978 1408 1.949 - - - - - - 0.981 0.968 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
6. cdca7a ENSDARG00000077620 9345 1.926 - - 0.982 - - - 0.944 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
7. bc2 5213 1.917 - - 0.997 - - - 0.920 - - putative breast adenocarcinoma marker
8. alpi.1 ENSDARG00000015273 1712 1.913 - - - - - - 0.987 0.926 - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
9. smyd1b ENSDARG00000091253 4964 1.906 - - 0.996 - - - 0.910 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
10. nhsl1b ENSDARG00000042627 3697 1.897 - - - - - - 0.988 0.909 - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
11. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.894 - - 0.986 - - - - 0.908 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
12. hat1 ENSDARG00000034916 5712 1.869 - - 0.995 - - - - 0.874 - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
13. CWC15 ENSDARG00000013382 8969 1.831 - 0.880 - - - - 0.951 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
14. syncripl ENSDARG00000026723 3889 1.775 - 0.854 - - - - - 0.921 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
15. actn1 ENSDARG00000007219 2919 1.774 - - - - - - 0.832 0.942 - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
16. ccdc22 ENSDARG00000052379 2276 1.769 - 0.774 - - - - 0.995 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
17. rasal2 ENSDARG00000036257 3223 1.768 - - - - - 0.831 - 0.937 - RAS protein activator like 2 [Source:ZFIN;Acc:ZDB-GENE-070912-180]
18. C13H10orf11 1209 1.75 - - 1.000 - - 0.750 - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
19. bves ENSDARG00000058548 2291 1.745 - - - - - 0.799 0.946 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
20. xpo1b ENSDARG00000063229 2529 1.716 - 0.731 - - - - 0.985 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
21. FRRS1_1 FRRS1_1 831 1.698 - 0.729 - - - - - 0.969 -
22. anxa4 ENSDARG00000036456 3332 1.694 - - - - - - 0.887 0.807 - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
23. zgc:153675 ENSDARG00000071555 3769 1.691 - 0.816 - - - - - 0.875 - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
24. rps27.2_1 ENSDARG00000055475 2786 1.681 - 0.717 - - - - - 0.964 - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
25. phf3 ENSDARG00000034768 1372 1.676 - 0.708 - - - - - 0.968 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
26. polb ENSDARG00000003749 2049 1.659 - 0.705 - - - - - 0.954 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
27. tmem65 ENSDARG00000076393 1646 1.657 - 0.742 - - - - - 0.915 - transmembrane protein 65 [Source:ZFIN;Acc:ZDB-GENE-081022-99]
28. smarca5 ENSDARG00000052348 15433 1.629 - 0.748 - - - - - 0.881 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
29. fkbp7 ENSDARG00000010962 2986 1.596 - 0.713 - - - - - 0.883 - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
30. zgc:136930 ENSDARG00000055192 1208 1.577 - - - - - 0.702 - 0.875 - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
31. pkp3 pkp3 9767 1.506 - - - - - - 0.767 0.739 -
32. tbcela ENSDARG00000002682 1179 1 - - 1.000 - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
33. btbd2 btbd2 1296 1 - - 1.000 - - - - - -
34. mtor ENSDARG00000053196 2156 1 - - 1.000 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
35. sdad1 ENSDARG00000105117 2819 1 - - 1.000 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
36. ITFG3 ITFG3 1803 1 - - 1.000 - - - - - -
37. prkag3b ENSDARG00000000369 1945 1 - - 1.000 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
38. ddah2 ENSDARG00000105009 4570 1 - - 1.000 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
39. si:ch211-152p11.4 ENSDARG00000079705 2341 1 - - 1.000 - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
40. CU695232.1 ENSDARG00000098286 1266 1 - - 1.000 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
41. igf2bp2a ENSDARG00000003421 2810 1 - - 1.000 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
42. CPAMD8 ENSDARG00000056530 3481 1 - - 1.000 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
43. CT485993.2 CT485993.2 1419 1 - - 1.000 - - - - - -
44. mapk15 ENSDARG00000100822 157 0.999 - - - - - - 0.999 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
45. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.999 - - - - - - 0.999 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
46. AL954146.1 ENSDARG00000038891 114 0.999 - - - - - - 0.999 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
47. vapal ENSDARG00000115862 3108 0.999 - - 0.999 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
48. itsn2a ENSDARG00000000161 115 0.999 - - - - - - 0.999 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
49. ptk6a ENSDARG00000017947 682 0.999 - - - - - - 0.999 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
50. magixa ENSDARG00000025108 561 0.999 - - - - - - 0.999 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
51. psmd11a ENSDARG00000060150 4529 0.999 - - 0.999 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
52. cryba1b ENSDARG00000053875 3256 0.999 - - - - - - 0.999 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
53. acad11 ENSDARG00000045411 350 0.999 - - - - - - 0.999 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
54. CABZ01078431.1 CABZ01078431.1 183 0.999 - - - - - - 0.999 - -
55. mpeg1 mpeg1 123 0.999 - - - - - - 0.999 - -
56. ipmkb ENSDARG00000029291 625 0.999 - - - - - - 0.999 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
57. ncoa6 ENSDARG00000071272 759 0.999 - - - - - - 0.999 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
58. ankrd6b ENSDARG00000029370 429 0.999 - - - - - - 0.999 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
59. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 0.999 - - 0.999 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
60. dusp11 ENSDARG00000038156 2490 0.999 - - 0.999 - - - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
61. rtdr1 rtdr1 158 0.999 - - - - - - 0.999 - -
62. ENSDARG00000078787 ENSDARG00000078787 97 0.999 - - - - - - 0.999 - -
63. gnpat ENSDARG00000074401 479 0.999 - - - - - - 0.999 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
64. znf451 ENSDARG00000076939 508 0.999 - - - - - - 0.999 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
65. CU019646.2 CU019646.2 519 0.999 - - - - - - 0.999 - -
66. TPGS1 TPGS1 228 0.999 - - - - - - 0.999 - -
67. rrp7a ENSDARG00000098934 1123 0.999 - - - - - - 0.999 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
68. mknk2b ENSDARG00000015164 2158 0.999 - - 0.999 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
69. C2H6orf52 C2H6orf52 2847 0.998 - - - - - - 0.998 - -
70. ubald1a_1 ENSDARG00000002362 401 0.998 - - - - - - 0.998 - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
71. nlk1 ENSDARG00000006566 1123 0.998 - - - - - - 0.998 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
72. cap1 ENSDARG00000016350 891 0.998 - - - - - - 0.998 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
73. snrpa1 ENSDARG00000024651 3306 0.998 - - 0.998 - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
74. AKAP2 AKAP2 4178 0.998 - - 0.998 - - - - - -
75. thbs4a ENSDARG00000102777 625 0.998 - - - - - - 0.998 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
76. ccdc25 ENSDARG00000021753 3837 0.998 - - 0.998 - - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
77. ppm1ab ENSDARG00000043250 772 0.998 - - - - - - 0.998 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
78. IGSF8 ENSDARG00000038467 2102 0.998 - - - - - - 0.998 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
79. timeless ENSDARG00000078497 1114 0.998 - - - - - - 0.998 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
80. crb3b ENSDARG00000068182 683 0.998 - - - - - - 0.998 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
81. trappc3 ENSDARG00000045364 1021 0.998 - - - - - - 0.998 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
82. ino80c ENSDARG00000055719 1512 0.998 - - - - - - 0.998 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
83. fam102ba ENSDARG00000053104 845 0.998 - - - - - - 0.998 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
84. RAB38 122 0.998 - - - - - - 0.998 - - RAB38, member RAS oncogene family
85. slc35b1 ENSDARG00000038213 465 0.998 - - - - - - 0.998 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
86. CABZ01115256.1 CABZ01115256.1 683 0.997 - - - - - - 0.997 - -
87. si:ch211-13c6.2 ENSDARG00000027738 1521 0.997 - - - - - - 0.997 - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
88. pcyt2 ENSDARG00000043003 3506 0.997 - - - - - - 0.997 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
89. med14 ENSDARG00000009953 1383 0.997 - - - - - - 0.997 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
90. PDE3B ENSDARG00000062190 372 0.997 - - - - - - 0.997 - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
91. ARSB ENSDARG00000108788 774 0.997 - - - - - - 0.997 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
92. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.997 - - - - - - 0.997 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
93. hiat1a ENSDARG00000013117 607 0.997 - - - - - - 0.997 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
94. loxl2b ENSDARG00000044074 1919 0.997 - - - - - - 0.997 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
95. NBR1 NBR1 752 0.997 - - - - - - 0.997 - -
96. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.997 - - - - - - 0.997 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
97. nup98 ENSDARG00000074955 3998 0.997 - - - - - - 0.997 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
98. si:rp71-45k5.4 ENSDARG00000035679 10411 0.996 - - 0.996 - - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
99. abracl ENSDARG00000042876 10208 0.996 - - 0.996 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
100. pdcd10b ENSDARG00000012591 3395 0.996 - - - - - - 0.996 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]

There are 729 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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