Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm10

Gene Name Gene ID Reads Annotation
lsm10 5 LSM10, U7 small nuclear RNA associated










Genes with expression patterns similar to lsm10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm10 5 5 - 1.000 - 1.000 1.000 - - 1.000 1.000 LSM10, U7 small nuclear RNA associated
2. sowahca ENSDARG00000098790 1 2 - 1.000 - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
3. tyro3 ENSDARG00000005356 4 2 - - - 1.000 - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. CABZ01085979.1 CABZ01085979.1 4 1.985 - 1.000 - - 0.985 - - - -
5. zgc:66455 ENSDARG00000052375 3 1.98 - 1.000 - - 0.980 - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
6. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.979 - 1.000 - 0.979 - - - - -
7. ABCC6 ABCC6 5 1.966 - 1.000 - - 0.966 - - - -
8. si:ch73-92e20.2 si:ch73-92e20.2 2 1.858 - 1.000 - - - - - - 0.858
9. SNORD59 SNORD59 7 1.795 - 1.000 - - - - - - 0.795
10. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.784 - 0.865 - - 0.919 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
11. CT025887.1 ENSDARG00000114574 1 1.746 - - - - - - - 0.746 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
12. si:dkey-14o6.7 si:dkey-14o6.7 9 1.746 - 1.000 - - - - - 0.746 -
13. ccbl2 4 1.746 - - - - - - - 0.746 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
14. fam219b ENSDARG00000104637 3 1.746 - 1.000 - - - - - 0.746 - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
15. BX323064.1 ENSDARG00000099914 11 1.712 - - - - 0.966 - - 0.746 -
16. si:dkey-224b4.5 3 1.599 - - - - 0.853 - - 0.746 - si:dkey-224b4.5, transcript variant X5
17. zgc:66483 ENSDARG00000099612 10 1.525 - - - - 0.730 - - - 0.795 zgc:66483 [Source:ZFIN;Acc:ZDB-GENE-030131-5765]
18. dapk3 ENSDARG00000074447 12 1.515 - 0.732 - - - - - - 0.783 death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
19. FAM120A ENSDARG00000075021 73 1.433 - 0.726 - 0.707 - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
20. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
21. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
22. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
23. kcna1 kcna1 174 1 - 1.000 - - - - - - -
24. prf1.6 ENSDARG00000024522, ENSDARG00000114201 0 1 - - - - - - - - 1.000 perforin 1.6 [Source:ZFIN;Acc:ZDB-GENE-070410-126]
25. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
26. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
27. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
28. AL954676.2 AL954676.2 50 1 - 1.000 - - - - - - -
29. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
30. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
31. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
32. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
33. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
34. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
35. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
36. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
37. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
38. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
39. MOB2 MOB2 4 1 - 1.000 - - - - - - -
40. hsp70l_1 ENSDARG00000055723 72 1 - 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
41. col5a3b ENSDARG00000101816 56 1 - - - 1.000 - - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
42. PCBP3 ENSDARG00000054378 17 1 - - - 1.000 - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
43. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
44. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
45. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
46. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
47. sobpb ENSDARG00000017386 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
48. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
49. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
50. TNPO1 ENSDARG00000035390 1 1 - - - - - - - - 1.000 transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
51. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
52. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
53. si:dkey-80c24.5 ENSDARG00000092501 6 1 - - - - - - - - 1.000 si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
54. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
55. si:ch211-237l4.6 ENSDARG00000056915 49 1 - 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
56. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -
57. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
58. kcnip2 ENSDARG00000075846 1 1 - - - - - - - - 1.000 Kv channel interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-081031-91]
59. ved ENSDARG00000102389 0 1 - - - - - - - - 1.000 ventrally expressed dharma/bozozok antagonist [Source:ZFIN;Acc:ZDB-GENE-030813-1]
60. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
61. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
62. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
63. ODF2 ODF2 6 1 - 1.000 - - - - - - -
64. PRR12 PRR12 38 1 - 1.000 - - - - - - -
65. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
66. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
67. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
68. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 1 - - - - - - - - 1.000 DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
69. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - - 1.000 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
70. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
71. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
72. GRINA GRINA 12 1 - - - - - - - - 1.000
73. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
74. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
75. bmp15 ENSDARG00000037491 16 1 - - - - - - - - 1.000 bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
76. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
77. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
78. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
79. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
80. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
81. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
82. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
83. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
84. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
85. CU596012.1 CU596012.1 24 1 - - - - - - - - 1.000
86. ZNF337_19 ZNF337_19 3 1 - - - - - - - - 1.000
87. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
88. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
89. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
90. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
91. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
92. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - - 1.000
93. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
94. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
95. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - 1.000 - - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
96. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
97. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
98. cx39.4 ENSDARG00000070357 17 1 - - - 1.000 - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
99. phf21aa ENSDARG00000006878 31 1 - 1.000 - - - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
100. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]

There are 572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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