Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm10

Gene Name Gene ID Reads Annotation
lsm10 5 LSM10, U7 small nuclear RNA associated










Genes with expression patterns similar to lsm10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm10 5 5 - 1.000 - 1.000 1.000 - - 1.000 1.000 LSM10, U7 small nuclear RNA associated
2. sowahca ENSDARG00000098790 1 2 - 1.000 - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
3. tyro3 ENSDARG00000005356 4 2 - - - 1.000 - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. CABZ01085979.1 CABZ01085979.1 4 1.985 - 1.000 - - 0.985 - - - -
5. zgc:66455 ENSDARG00000052375 3 1.98 - 1.000 - - 0.980 - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
6. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.979 - 1.000 - 0.979 - - - - -
7. ABCC6 ABCC6 5 1.966 - 1.000 - - 0.966 - - - -
8. si:ch73-92e20.2 si:ch73-92e20.2 2 1.858 - 1.000 - - - - - - 0.858
9. SNORD59 SNORD59 7 1.795 - 1.000 - - - - - - 0.795
10. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.784 - 0.865 - - 0.919 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
11. ccbl2 4 1.746 - - - - - - - 0.746 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
12. fam219b ENSDARG00000104637 3 1.746 - 1.000 - - - - - 0.746 - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
13. si:dkey-14o6.7 si:dkey-14o6.7 9 1.746 - 1.000 - - - - - 0.746 -
14. CT025887.1 ENSDARG00000114574 1 1.746 - - - - - - - 0.746 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
15. BX323064.1 ENSDARG00000099914 11 1.712 - - - - 0.966 - - 0.746 -
16. si:dkey-224b4.5 3 1.599 - - - - 0.853 - - 0.746 - si:dkey-224b4.5, transcript variant X5
17. zgc:66483 ENSDARG00000099612 10 1.525 - - - - 0.730 - - - 0.795 zgc:66483 [Source:ZFIN;Acc:ZDB-GENE-030131-5765]
18. dapk3 ENSDARG00000074447 12 1.515 - 0.732 - - - - - - 0.783 death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
19. FAM120A ENSDARG00000075021 73 1.433 - 0.726 - 0.707 - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
20. RNF207 RNF207 9 1 - - - - - - - - 1.000
21. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
22. galr1 galr1 9 1 - 1.000 - - - - - - -
23. cacna2d2 cacna2d2 16 1 - - - 1.000 - - - - -
24. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
25. cx39.4 ENSDARG00000070357 17 1 - - - 1.000 - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
26. fibpb ENSDARG00000087666 0 1 - - - - - - - - 1.000 fibroblast growth factor (acidic) intracellular binding protein b [Source:ZFIN;Acc:ZDB-GENE-040630-2]
27. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
28. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
29. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
30. zgc:112242 11 1 - - - 1.000 - - - - - zgc:112242
31. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
32. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
33. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
34. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
35. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
36. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
37. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
38. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
39. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
40. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
41. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
42. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
43. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
44. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
45. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
46. fam5b fam5b 45 1 - 1.000 - - - - - - -
47. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
48. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
49. epm2a ENSDARG00000059044 10 1 - - - - - - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
50. PRR12 PRR12 38 1 - 1.000 - - - - - - -
51. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
52. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
53. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
54. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
55. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
56. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
57. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
58. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
59. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
60. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
61. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
62. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
63. palmda ENSDARG00000001913 26 1 - - - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
64. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - - - - 1.000
65. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
66. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
67. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
68. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
69. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - - - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
70. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
71. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
72. mtus2 mtus2 22 1 - 1.000 - - - - - - -
73. OTUD7A ENSDARG00000045556 1 1 - - - - - - - - 1.000 OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
74. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
75. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
76. cdh18 cdh18 64 1 - 1.000 - - - - - - -
77. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
78. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
79. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
80. si:ch211-207e19.16 si:ch211-207e19.16 3 1 - - - 1.000 - - - - -
81. si:ch211-76l23.6 si:ch211-76l23.6 68 1 - - - 1.000 - - - - -
82. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
83. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
84. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
85. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
86. NFATC4 ENSDARG00000054162 44 1 - 1.000 - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
87. CU596012.1 CU596012.1 24 1 - - - - - - - - 1.000
88. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
89. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
90. prf1.6 ENSDARG00000024522, ENSDARG00000114201 0 1 - - - - - - - - 1.000 perforin 1.6 [Source:ZFIN;Acc:ZDB-GENE-070410-126]
91. CABZ01087946.1 CABZ01087946.1 2 1 - - - - - - - - 1.000
92. si:dkey-65b12.12 ENSDARG00000094458 26 1 - - - - - - - - 1.000 si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
93. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
94. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
95. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
96. CT573264.3 CT573264.3 0 1 - - - - - - - - 1.000
97. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
98. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
99. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
100. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -

There are 572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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