Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm10

Gene Name Gene ID Reads Annotation
lsm10 5 LSM10, U7 small nuclear RNA associated










Genes with expression patterns similar to lsm10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm10 5 5 - 1.000 - 1.000 1.000 - - 1.000 1.000 LSM10, U7 small nuclear RNA associated
2. sowahca ENSDARG00000098790 1 2 - 1.000 - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
3. tyro3 ENSDARG00000005356 4 2 - - - 1.000 - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. CABZ01085979.1 CABZ01085979.1 4 1.985 - 1.000 - - 0.985 - - - -
5. zgc:66455 ENSDARG00000052375 3 1.98 - 1.000 - - 0.980 - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
6. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.979 - 1.000 - 0.979 - - - - -
7. ABCC6 ABCC6 5 1.966 - 1.000 - - 0.966 - - - -
8. si:ch73-92e20.2 si:ch73-92e20.2 2 1.858 - 1.000 - - - - - - 0.858
9. SNORD59 SNORD59 7 1.795 - 1.000 - - - - - - 0.795
10. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.784 - 0.865 - - 0.919 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
11. si:dkey-14o6.7 si:dkey-14o6.7 9 1.746 - 1.000 - - - - - 0.746 -
12. fam219b ENSDARG00000104637 3 1.746 - 1.000 - - - - - 0.746 - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
13. CT025887.1 ENSDARG00000114574 1 1.746 - - - - - - - 0.746 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
14. ccbl2 4 1.746 - - - - - - - 0.746 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
15. BX323064.1 ENSDARG00000099914 11 1.712 - - - - 0.966 - - 0.746 -
16. si:dkey-224b4.5 3 1.599 - - - - 0.853 - - 0.746 - si:dkey-224b4.5, transcript variant X5
17. zgc:66483 ENSDARG00000099612 10 1.525 - - - - 0.730 - - - 0.795 zgc:66483 [Source:ZFIN;Acc:ZDB-GENE-030131-5765]
18. dapk3 ENSDARG00000074447 12 1.515 - 0.732 - - - - - - 0.783 death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
19. FAM120A ENSDARG00000075021 73 1.433 - 0.726 - 0.707 - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
20. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
21. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
22. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
23. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - 1.000 - - - - - - -
24. pcyox1 ENSDARG00000103052 20 1 - 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
25. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
26. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
27. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
28. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
29. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - 1.000 - - - - - - -
30. amy2a ENSDARG00000013856 13 1 - 1.000 - - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
31. CABZ01055343.2_1 CABZ01055343.2_1 6 1 - - - - - - - - 1.000
32. si:dkey-193c22.1 ENSDARG00000093687 104 1 - 1.000 - - - - - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
33. RIMS2 RIMS2 2 1 - - - - - - - - 1.000
34. GRINA GRINA 12 1 - - - - - - - - 1.000
35. CMA1_3 CMA1_3 0 1 - 1.000 - - - - - - -
36. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
37. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
38. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
39. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
40. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
41. fam5b fam5b 45 1 - 1.000 - - - - - - -
42. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
43. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
44. FAXC FAXC 102 1 - 1.000 - - - - - - -
45. ved ENSDARG00000102389 0 1 - - - - - - - - 1.000 ventrally expressed dharma/bozozok antagonist [Source:ZFIN;Acc:ZDB-GENE-030813-1]
46. ABHD12B_1 ABHD12B_1 57 1 - 1.000 - - - - - - -
47. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
48. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - - 1.000
49. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
50. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
51. LRRK1_1 LRRK1_1 11 1 - 1.000 - - - - - - -
52. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
53. mtus2 mtus2 22 1 - 1.000 - - - - - - -
54. kcnc3b ENSDARG00000098816 0 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 3b [Source:ZFIN;Acc:ZDB-GENE-100901-2]
55. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
56. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
57. TNPO1 ENSDARG00000035390 1 1 - - - - - - - - 1.000 transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
58. galr1 galr1 9 1 - 1.000 - - - - - - -
59. PCBP3 ENSDARG00000054378 17 1 - - - 1.000 - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
60. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
61. si:ch211-57m13.9 ENSDARG00000095884 10 1 - 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
62. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
63. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
64. LRFN4_1 LRFN4_1 5 1 - 1.000 - - - - - - -
65. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
66. zgc:173593 ENSDARG00000077360 10 1 - 1.000 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
67. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - 1.000 -
68. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
69. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
70. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
71. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
72. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
73. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - - - 1.000
74. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
75. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
76. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
77. yme1l1b ENSDARG00000104401 0 1 - - - - - - - - 1.000 YME1-like 1b [Source:ZFIN;Acc:ZDB-GENE-070410-25]
78. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
79. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
80. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
81. GBE1 GBE1 12 1 - - - - - - - - 1.000
82. CR381673.1 ENSDARG00000098337 7 1 - - - - - - - - 1.000
83. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - - - - 1.000
84. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
85. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - - 1.000 zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
86. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
87. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
88. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
89. GLS2 GLS2 10 1 - 1.000 - - - - - - -
90. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
91. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
92. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
93. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
94. CU467646.3 ENSDARG00000099076 36 1 - - - - - - - - 1.000 mucin-2-like [Source:NCBI gene;Acc:108179180]
95. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
96. arrb2a ENSDARG00000039215 5 1 - 1.000 - - - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
97. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
98. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
99. igsf5 igsf5 85 1 - 1.000 - - - - - - -
100. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -

There are 572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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