Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lsg1

Gene Name Gene ID Reads Annotation
lsg1 ENSDARG00000015352 812 large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]










Genes with expression patterns similar to lsg1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsg1 ENSDARG00000015352 812 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]
2. ptbp2a ENSDARG00000101947 1921 1.696 - 0.782 - - - - 0.914 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
3. abt1 ENSDARG00000043666 345 1.681 - 0.906 - - - - 0.775 - - activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]
4. KCNU1 KCNU1 246 1.663 - 0.841 - - - - 0.822 - -
5. EDEM3 ENSDARG00000074129 805 1.608 - 0.824 - - - - 0.784 - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
6. hspa12a ENSDARG00000070603 1474 1.607 - 0.799 - - - - 0.808 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
7. zgc:113385 zgc:113385 297 1.601 - 0.855 - - - - 0.746 - -
8. RAPGEFL1 ENSDARG00000079912 1074 1.577 - 0.804 - - - - 0.773 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
9. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 1.565 - 0.792 - - - - 0.773 - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
10. dram2b ENSDARG00000044241 503 1.545 - 0.816 - - - 0.729 - - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
11. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.514 - 0.729 - - - - 0.785 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
12. fosb ENSDARG00000055751 170 1.509 - 0.708 - - - - 0.801 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
13. wdfy4 ENSDARG00000077009 802 1.509 - 0.773 - - - - 0.736 - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
14. rock1 ENSDARG00000058993 2603 1.494 - - - - - 0.717 0.777 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
15. dohh ENSDARG00000003564, ENSDARG00000116423 1117 1.49 - 0.714 - - - - 0.776 - - deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
16. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 1.487 - - - - - 0.754 0.733 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
17. SLC22A16 ENSDARG00000015869 1086 1.455 - 0.744 - - - - 0.711 - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
18. slc48a1b ENSDARG00000026109 1427 1.448 - 0.740 - - - - 0.708 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
19. hgfb ENSDARG00000079076 168 1.443 - - - - - 0.718 0.725 - - hepatocyte growth factor b [Source:ZFIN;Acc:ZDB-GENE-041014-3]
20. PRSS16 ENSDARG00000076602 963 1.442 - 0.734 - - - - 0.708 - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
21. coil ENSDARG00000040070 863 0.954 - 0.954 - - - - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
22. foxn3 ENSDARG00000012833 169 0.944 - - - - - - 0.944 - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
23. st3gal2l st3gal2l 393 0.941 - - - - - - 0.941 - -
24. ppme1 ENSDARG00000009771 1697 0.926 - 0.926 - - - - - - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
25. ddx51 ENSDARG00000025854 691 0.921 - 0.921 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
26. nfu1 ENSDARG00000068125 1743 0.92 - 0.920 - - - - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
27. tspan2 tspan2 948 0.917 - 0.917 - - - - - - -
28. ccdc129 37 0.917 - - - - - - 0.917 - - coiled-coil domain containing 129, transcript variant X2
29. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.916 - 0.916 - - - - - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
30. CT485993.2 CT485993.2 1419 0.914 - 0.914 - - - - - - -
31. garem ENSDARG00000017242 912 0.913 - - - - - - 0.913 - - GRB2 associated, regulator of MAPK1 [Source:ZFIN;Acc:ZDB-GENE-040426-767]
32. gpam ENSDARG00000074169 488 0.909 - 0.909 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
33. ntpcr ENSDARG00000021853 104 0.907 - - - - - - 0.907 - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
34. rab40c ENSDARG00000061208 1072 0.906 - 0.906 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
35. hmgcrb ENSDARG00000105206 2080 0.902 - 0.902 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
36. map7d1b ENSDARG00000104701 1655 0.901 - 0.901 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
37. rab33ba ENSDARG00000052290 914 0.9 - 0.900 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
38. C13H10orf32 C13H10orf32 465 0.899 - 0.899 - - - - - - -
39. phyhiplb ENSDARG00000070498 348 0.899 - 0.899 - - - - - - - phytanoyl-CoA 2-hydroxylase interacting protein-like b [Source:ZFIN;Acc:ZDB-GENE-040927-27]
40. athl1 athl1 172 0.898 - - - - - - 0.898 - -
41. phactr3b ENSDARG00000019304 447 0.897 - 0.897 - - - - - - - phosphatase and actin regulator 3b [Source:ZFIN;Acc:ZDB-GENE-050522-156]
42. SLC27A2 SLC27A2 436 0.896 - 0.896 - - - - - - -
43. si:dkey-67c22.2 ENSDARG00000055389 6410 0.895 - 0.895 - - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
44. cacng6a ENSDARG00000036457 344 0.895 - 0.895 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
45. serpine2 ENSDARG00000029353 2274 0.894 - 0.894 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
46. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.893 - 0.893 - - - - - - - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
47. ck2a2a ck2a2a 1695 0.892 - 0.892 - - - - - - -
48. ankrd28b ENSDARG00000009023 960 0.891 - 0.891 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
49. NUDT8 ENSDARG00000007722 329 0.891 - 0.891 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
50. ZNF337_6 ZNF337_6 898 0.89 - - - - - - 0.890 - -
51. setd8b 2528 0.889 - 0.889 - - - - - - - SET domain containing (lysine methyltransferase) 8b
52. lamp1 1017 0.889 - 0.889 - - - - - - - lysosomal-associated membrane protein 1
53. RBMS1 RBMS1 258 0.889 - 0.889 - - - - - - -
54. mrps11 ENSDARG00000075129 1360 0.888 - 0.888 - - - - - - - mitochondrial ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040724-84]
55. C5HXorf56 C5HXorf56 880 0.887 - 0.887 - - - - - - -
56. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 0.887 - 0.887 - - - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
57. mettl1 ENSDARG00000076518 366 0.887 - 0.887 - - - - - - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
58. asrgl1 ENSDARG00000021681 530 0.886 - - - - - - 0.886 - - asparaginase like 1 [Source:ZFIN;Acc:ZDB-GENE-050320-102]
59. GEMIN7 ENSDARG00000041011 529 0.885 - 0.885 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
60. xpot ENSDARG00000099652 3026 0.885 - 0.885 - - - - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
61. OLFM4_1 OLFM4_1 213 0.883 - - - - - - 0.883 - -
62. fbrs ENSDARG00000074688 621 0.883 - - - - - - 0.883 - - fibrosin [Source:ZFIN;Acc:ZDB-GENE-111207-1]
63. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.883 - 0.883 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
64. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.883 - - - - - - 0.883 - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
65. acat1 ENSDARG00000045888 1488 0.882 - 0.882 - - - - - - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
66. CCDC34 CCDC34 313 0.882 - - - - - - 0.882 - -
67. sowahcb ENSDARG00000059582 178 0.881 - 0.881 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
68. tmem65 ENSDARG00000076393 1646 0.88 - 0.880 - - - - - - - transmembrane protein 65 [Source:ZFIN;Acc:ZDB-GENE-081022-99]
69. zfr2 ENSDARG00000071683 780 0.88 - 0.880 - - - - - - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
70. slc25a11 ENSDARG00000035741 3377 0.88 - 0.880 - - - - - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
71. wdr18 ENSDARG00000041113 810 0.879 - 0.879 - - - - - - - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
72. BX005256.1 ENSDARG00000106112 467 0.879 - 0.879 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
73. kremen1 ENSDARG00000062579 190 0.878 - 0.878 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
74. cabp1a ENSDARG00000019990 110 0.877 - - - - - - 0.877 - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
75. CLEC17A CLEC17A 42 0.877 - - - - - - 0.877 - -
76. pdf ENSDARG00000013950 293 0.876 - 0.876 - - - - - - - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
77. foxn4 ENSDARG00000010591 2332 0.875 - 0.875 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
78. pddc1 pddc1 257 0.875 - 0.875 - - - - - - -
79. ckap5 ENSDARG00000102674 5068 0.874 - 0.874 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
80. hoxc6a ENSDARG00000070343 2839 0.873 - 0.873 - - - - - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
81. tecpr2 ENSDARG00000060835 491 0.873 - - - - - - 0.873 - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
82. kcnj13 ENSDARG00000043443 700 0.872 - 0.872 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
83. rgs7 rgs7 208 0.871 - - - - - - 0.871 - -
84. sparcl1 ENSDARG00000074989 80 0.871 - - - - - - 0.871 - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
85. cflara ENSDARG00000055966 464 0.871 - 0.871 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
86. csad ENSDARG00000026348 1461 0.871 - 0.871 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
87. snap47 ENSDARG00000063445 722 0.871 - - - - - 0.871 - - - synaptosomal-associated protein, 47 [Source:ZFIN;Acc:ZDB-GENE-060825-140]
88. llgl1 ENSDARG00000009693 4205 0.871 - 0.871 - - - - - - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
89. par1 par1 564 0.87 - - - - - 0.870 - - -
90. esrrd ENSDARG00000015064 291 0.87 - 0.870 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
91. rasl12 ENSDARG00000002701 66 0.87 - - - - - - 0.870 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
92. tex261 ENSDARG00000044584 513 0.869 - 0.869 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
93. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.869 - 0.869 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
94. ATP5J 343 0.869 - 0.869 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
95. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.869 - 0.869 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
96. TM2D2 ENSDARG00000035515 561 0.869 - 0.869 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
97. emilin1b ENSDARG00000026166 1530 0.869 - 0.869 - - - - - - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
98. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 0.868 - 0.868 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
99. si:dkey-240e12.6 ENSDARG00000110137 674 0.868 - 0.868 - - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
100. RNF130 ENSDARG00000089767 559 0.868 - 0.868 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]

There are 849 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA