Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrtomt

Gene Name Gene ID Reads Annotation
lrtomt lrtomt 39










Genes with expression patterns similar to lrtomt

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrtomt lrtomt 39 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. admb ENSDARG00000069027 67 2.418 0.702 0.837 - - - 0.879 - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
3. nme5 ENSDARG00000041617 135 2.355 0.806 0.722 - - - - 0.827 - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
4. spata4_1 ENSDARG00000036189, ENSDARG00000114468 39 1.929 - - - - 0.948 - 0.981 - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
5. SNORD14 SNORD14 31 1.886 - - - - - 1.000 0.886 - -
6. samsn1a ENSDARG00000054543 28 1.868 - 0.902 - - - 0.966 - - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
7. mfsd6l ENSDARG00000014761 60 1.82 - 0.978 - - - 0.842 - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
8. si:dkey-30c15.12 ENSDARG00000058546 12 1.818 - 0.881 - - 0.937 - - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
9. BX004873.3 BX004873.3 59 1.809 - 0.923 - - - - 0.886 - -
10. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.793 - 0.978 - - - - - 0.815 - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
11. wu:fd60c08 wu:fd60c08 35 1.773 - - - - 0.887 - 0.886 - -
12. zbtb38 ENSDARG00000100607 17 1.765 - 0.879 - - - - 0.886 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
13. CR388231.1 ENSDARG00000098710 153 1.763 - 0.893 - - - - 0.870 - -
14. BX927369.3 BX927369.3 5 1.755 - - - - - - 0.940 0.815 -
15. WDR63 ENSDARG00000105093 13 1.738 - - - - - 0.852 0.886 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
16. C18H15orf26 C18H15orf26 36 1.722 - 0.960 - 0.762 - - - - -
17. kcnj1a.2 ENSDARG00000090866 8 1.721 - 0.879 - - - 0.842 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
18. tmeff1a ENSDARG00000008191 74 1.712 - 0.877 - - - - 0.835 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
19. zgc:92218 zgc:92218 64 1.677 0.815 - - - - 0.862 - - -
20. CDH16 ENSDARG00000077570 78 1.676 - - 0.877 - - 0.799 - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
21. HABP4 HABP4 33 1.67 - - - - - 0.842 0.828 - -
22. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1.665 - - - - - 0.842 0.823 - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
23. ddx54 ENSDARG00000105286 183 1.653 - - - 0.711 - 0.942 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
24. sbno2a ENSDARG00000098801 40 1.645 - 0.854 - 0.791 - - - - - strawberry notch homolog 2a [Source:ZFIN;Acc:ZDB-GENE-100629-3]
25. kin ENSDARG00000045515 109 1.635 - 0.735 - - - - 0.900 - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
26. armc4 ENSDARG00000055128 220 1.634 - 0.812 - - - - 0.822 - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
27. gal3st1 gal3st1 108 1.622 0.788 - - - - 0.834 - - -
28. mtx3 ENSDARG00000090195 42 1.622 - 0.903 - 0.719 - - - - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
29. ptk2ba ENSDARG00000022841 19 1.611 - - - - - 0.725 0.886 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
30. PDCL3 ENSDARG00000100651 164 1.608 - - - - - 0.900 0.708 - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
31. si:ch211-89o5.1 si:ch211-89o5.1 91 1.595 - - - 0.753 - 0.842 - - -
32. ncf1 ENSDARG00000033735 83 1.591 0.841 - - - - 0.750 - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
33. TRAK1 212 1.588 - 0.817 - - - - 0.771 - - trafficking protein, kinesin binding 1, transcript variant X6
34. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.588 0.702 - - - - - 0.886 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
35. PIK3R6 PIK3R6 149 1.586 0.869 - - - - 0.717 - - -
36. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.583 0.702 0.881 - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
37. mtfr1 ENSDARG00000045304 277 1.576 0.783 0.793 - - - - - - - mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
38. brwd3 ENSDARG00000035540 92 1.571 - - - - - 0.842 0.729 - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
39. rnf32 ENSDARG00000060035, ENSDARG00000116092 122 1.566 - - - - - 0.730 0.836 - - ring finger protein 32 [Source:ZFIN;Acc:ZDB-GENE-061013-39]
40. ube2b ENSDARG00000026035 51 1.562 - - - - - 0.805 0.757 - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
41. chrna7 ENSDARG00000101702 50 1.556 0.702 - - - - - 0.854 - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
42. egr3 ENSDARG00000089156 71 1.552 - 0.824 - - - - 0.728 - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
43. C5H9orf9 C5H9orf9 6 1.544 0.702 - - - - 0.842 - - -
44. dnase1l3l dnase1l3l 16 1.544 0.702 - - - - 0.842 - - -
45. LRCH4 ENSDARG00000068258 22 1.53 - - - 0.802 - - 0.728 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
46. otud4 ENSDARG00000077810 120 1.524 0.720 0.804 - - - - - - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
47. sdccag8 ENSDARG00000078947 68 1.514 - 0.750 - - - 0.764 - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
48. immp2l ENSDARG00000004925 215 1.507 - 0.785 - 0.722 - - - - - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
49. haus3 ENSDARG00000061385, ENSDARG00000110959 343 1.5 - - - - - 0.778 0.722 - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
50. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.493 0.702 - - - 0.791 - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
51. C8H1orf194 C8H1orf194 111 1.486 0.752 - - - - - 0.734 - -
52. SHC3 ENSDARG00000098909 332 1.477 - 0.713 - - - - 0.764 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
53. prcp ENSDARG00000037883 473 1.474 - 0.722 - - - 0.752 - - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
54. irf7 ENSDARG00000045661 76 1.46 - 0.723 - - - 0.737 - - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
55. rcn2 ENSDARG00000039378, ENSDARG00000110051, ENSDARG00000113764 61 1.46 - - 0.716 - - - 0.744 - - reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62]
56. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
57. C5H9orf117 C5H9orf117 88 1 1.000 - - - - - - - -
58. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - 1.000 - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
59. bsnd ENSDARG00000086265 178 1 1.000 - - - - - - - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
60. si:dkey-45k15.1 ENSDARG00000061714 32 1 1.000 - - - - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
61. zgc:153345 ENSDARG00000055622 29 1 - - - - - 1.000 - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
62. ibtk ENSDARG00000074424 146 1 - - - - - 1.000 - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6246]
63. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1 - - - - - 1.000 - - - gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
64. cbln10 ENSDARG00000023157 17 1 1.000 - - - - - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
65. wnt8b ENSDARG00000006911 98 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
66. npffr1l3 ENSDARG00000010712 18 1 - - - - - 1.000 - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
67. CABZ01067743.1 CABZ01067743.1 48 1 - - - - - 1.000 - - -
68. zgc:158446 36 1 - - - - - 1.000 - - - zgc:158446
69. si:ch211-74m13.3 ENSDARG00000076144 55 0.984 - 0.984 - - - - - - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
70. TMEM173 ENSDARG00000091058 25 0.979 0.979 - - - - - - - - transmembrane protein 173 [Source:ZFIN;Acc:ZDB-GENE-120921-1]
71. si:dkey-178a21.3 si:dkey-178a21.3 23 0.978 - 0.978 - - - - - - -
72. GRM5_1 GRM5_1 18 0.978 - 0.978 - - - - - - -
73. SLITRK5 SLITRK5 122 0.978 - 0.978 - - - - - - -
74. zgc:193690 34 0.966 - - - - - 0.966 - - - zgc:193690
75. tmem79a ENSDARG00000071250 48 0.966 - - - - - 0.966 - - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
76. itpa ENSDARG00000057529 104 0.965 - - - - 0.965 - - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
77. eno1b ENSDARG00000013750 63 0.965 - 0.965 - - - - - - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
78. naif1 ENSDARG00000062753 176 0.964 - 0.964 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
79. si:dkey-165g20.5 si:dkey-165g20.5 125 0.964 - 0.964 - - - - - - -
80. si:ch211-173n18.4 129 0.96 - 0.960 - - - - - - - si:ch211-173n18.4, transcript variant X1
81. CABZ01020207.1 CABZ01020207.1 145 0.958 - 0.958 - - - - - - -
82. cldn17 ENSDARG00000099950 14 0.956 - - 0.956 - - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
83. znf516 ENSDARG00000070809 65 0.947 - 0.947 - - - - - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
84. LRRC2 LRRC2 23 0.945 0.945 - - - - - - - -
85. ECEL1 ENSDARG00000060549 62 0.942 0.942 - - - - - - - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
86. si:ch73-343l4.2 ENSDARG00000079903 10 0.942 - - - - - 0.942 - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
87. si:ch73-91k6.8 si:ch73-91k6.8 37 0.94 - - - - - - 0.940 - -
88. atp2b1b ENSDARG00000007788 56 0.938 0.938 - - - - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
89. prph2l ENSDARG00000021345 3 0.937 - - - - 0.937 - - - - peripherin 2, like [Source:ZFIN;Acc:ZDB-GENE-041001-147]
90. COL5A3 COL5A3 3 0.937 - - - - 0.937 - - - -
91. EFCAB10 EFCAB10 3 0.937 - - - - 0.937 - - - -
92. ankrd1b ENSDARG00000076192 204 0.937 - - - - 0.937 - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
93. si:ch73-27e22.5 si:ch73-27e22.5 10 0.937 - - - - 0.937 - - - -
94. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.937 - - - - 0.937 - - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
95. si:dkey-3d18.4 si:dkey-3d18.4 43 0.937 - - - - 0.937 - - - -
96. si:dkey-26i13.8 ENSDARG00000062606 13 0.937 - - - - 0.937 - - - - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
97. CR388163.4 CR388163.4 4 0.937 - - - - 0.937 - - - -
98. stk32a ENSDARG00000079499 17 0.937 - - - - 0.937 - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
99. slc37a1 ENSDARG00000086103 16 0.936 - - - - 0.936 - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
100. mxc ENSDARG00000024789 68 0.936 - - - - 0.936 - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]

There are 1352 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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