Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrsam1

Gene Name Gene ID Reads Annotation
lrsam1 ENSDARG00000060683, ENSDARG00000110826, ENSDARG00000114858 4 leucine rich repeat and sterile alpha motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-97]










Genes with expression patterns similar to lrsam1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrsam1 ENSDARG00000060683, ENSDARG00000110826, ENSDARG00000114858 4 2 1.000 - - - - - - 1.000 - leucine rich repeat and sterile alpha motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-97]
2. dync1i2a ENSDARG00000078386 53 1.596 0.719 - - - - - - 0.877 - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
3. si:ch73-290k24.5 ENSDARG00000076310 39 1.53 0.723 - - - - - - 0.807 - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
4. C21H11orf82 C21H11orf82 50 1 1.000 - - - - - - - -
5. glulc ENSDARG00000013227 6 1 - - - - - - - 1.000 - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
6. umodl1 ENSDARG00000068923 2 1 - - - - - - - 1.000 - uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]
7. KIFC2 KIFC2 5 1 - - - - - - - 1.000 -
8. U11 U11 11 1 - - - - - - - 1.000 -
9. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - - - - 1.000 - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
10. znf1112 ENSDARG00000095997 2 1 - - - - - - - 1.000 - zinc finger protein 1112 [Source:ZFIN;Acc:ZDB-GENE-110913-179]
11. zgc:173619_1 2 1 - - - - - - - 1.000 - zgc:173619
12. si:dkey-247i3.5 ENSDARG00000096186 7 1 - - - - - - - 1.000 - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
13. HYKK_1 HYKK_1 4 1 - - - - - - - 1.000 -
14. taar10c ENSDARG00000109396, ENSDARG00000110168, ENSDARG00000114249, ENSDARG00000117173 2 1 - - - - - - - 1.000 - trace amine-associated receptor 10c [Source:ZFIN;Acc:ZDB-GENE-041014-57]
15. her5 ENSDARG00000008796 7 1 - - - - - - - 1.000 - hairy-related 5 [Source:ZFIN;Acc:ZDB-GENE-990415-90]
16. CDKN2B CDKN2B 5 1 - - - - - - - 1.000 -
17. VGLL2 VGLL2 13 1 1.000 - - - - - - - -
18. si:dkey-182i3.10 ENSDARG00000096614 2 1 - - - - - - - 1.000 - si:dkey-182i3.10 [Source:ZFIN;Acc:ZDB-GENE-121214-231]
19. CU302436.1_1 ENSDARG00000114500 18 1 - - - - - - - 1.000 - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
20. snoU6-53 snoU6-53 2 1 - - - - - - - 1.000 -
21. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - - - - - 1.000 - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
22. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - - - 1.000 - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
23. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 0.977 - - - - - - - 0.977 - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
24. PEG3_12 PEG3_12 128 0.969 0.969 - - - - - - - -
25. SNORA63_1 SNORA63_1 7 0.965 - - - - - - - 0.965 -
26. rad21l1 ENSDARG00000022493 4 0.963 - - - - - - - 0.963 - RAD21 cohesin complex component like 1 [Source:ZFIN;Acc:ZDB-GENE-061103-505]
27. CR792453.3 ENSDARG00000110328 5 0.963 - - - - - - - 0.963 - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
28. HTRA2_10 HTRA2_10 2 0.961 - - - - - - - 0.961 -
29. PCBP3 ENSDARG00000054378 17 0.958 - - - - - - - 0.958 - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
30. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.955 - - - - - - - 0.955 - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
31. kcnt1 ENSDARG00000079484 45 0.954 - - - - - - - 0.954 - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
32. nitr3a ENSDARG00000110676 13 0.952 - - - - - - - 0.952 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
33. MLF1IP MLF1IP 15 0.948 0.948 - - - - - - - -
34. si:dkey-122c11.4 si:dkey-122c11.4 13 0.938 - - - - - - - 0.938 -
35. GPRIN1 10 0.934 - - - - - - - 0.934 - G protein regulated inducer of neurite outgrowth 1
36. ANKRD34C 13 0.932 - - - - - - - 0.932 - ankyrin repeat domain 34C
37. hsf5 ENSDARG00000104686 9 0.932 - - - - - - - 0.932 - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
38. CACNA2D1 ENSDARG00000073752 6 0.932 - - - - - - - 0.932 - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
39. camk1db ENSDARG00000017446 47 0.927 - - - - - - - 0.927 - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
40. si:dkey-80c24.5 ENSDARG00000092501 6 0.926 - - - - - - - 0.926 - si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
41. si:ch211-209f23.3 ENSDARG00000095607 15 0.922 - - - - - - - 0.922 - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
42. efcab4bb efcab4bb 27 0.919 - - - - - - - 0.919 -
43. PCDH10_1 PCDH10_1 57 0.918 0.918 - - - - - - - -
44. CAMK1 CAMK1 28 0.916 - - - - - - - 0.916 -
45. SPTBN1 ENSDARG00000102883 26 0.916 0.916 - - - - - - - - spectrin, beta, non-erythrocytic 1 [Source:ZFIN;Acc:ZDB-GENE-031006-3]
46. SNORA2 SNORA2 486 0.914 0.914 - - - - - - - -
47. si:ch211-89f22.1 si:ch211-89f22.1 11 0.913 - - - - - - - 0.913 -
48. ELFN2 ELFN2 7 0.907 - - - - - - - 0.907 -
49. mettl25 ENSDARG00000045754 36 0.899 - - - - - - - 0.899 - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
50. si:ch211-208f21.2 ENSDARG00000094177 61 0.898 - - - - - - - 0.898 - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
51. grin2ab ENSDARG00000070543 31 0.897 - - - - - - - 0.897 - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
52. si:dkey-253d23.8 ENSDARG00000094427 26 0.893 - - - - - - - 0.893 - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
53. lingo4b ENSDARG00000078527 235 0.89 0.890 - - - - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
54. LUZP1 ENSDARG00000075556 55 0.889 0.889 - - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
55. zgc:174623 37 0.887 - - - - - - - 0.887 - zgc:174623, transcript variant X1
56. eng2a eng2a 186 0.886 - - - - - - - 0.886 -
57. ZNF70_5 ZNF70_5 25 0.881 - - - - - - - 0.881 -
58. U12 U12 14 0.876 - - - - - - - 0.876 -
59. sult2st3 ENSDARG00000028367 79 0.876 - - - - - - - 0.876 - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
60. si:dkey-20i20.9 ENSDARG00000092027 23 0.875 0.875 - - - - - - - - si:dkey-20i20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-152]
61. mettl21d mettl21d 94 0.871 - - - - - - - 0.871 -
62. osbp2 ENSDARG00000053487 42 0.87 - - - - - - - 0.870 - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
63. GMNC ENSDARG00000068719 28 0.868 - - - - - - - 0.868 - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
64. ARMC6 ENSDARG00000103770 39 0.866 - - - - - - - 0.866 - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
65. zgc:101765 ENSDARG00000054934, ENSDARG00000110184 49 0.866 - - - - - - - 0.866 - zgc:101765 [Source:ZFIN;Acc:ZDB-GENE-041010-156]
66. cbx6a ENSDARG00000071051 379 0.862 - - - - - - - 0.862 - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
67. BX663524.2 BX663524.2 76 0.859 0.859 - - - - - - - -
68. camkk1 camkk1 542 0.857 0.857 - - - - - - - -
69. si:ch211-81a5.8 ENSDARG00000070972 59 0.852 0.852 - - - - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
70. AL954676.2 AL954676.2 50 0.849 - - - - - - - 0.849 -
71. BX005294.4 BX005294.4 8 0.849 - - - - - - - 0.849 -
72. commd8 ENSDARG00000028201 1318 0.849 0.849 - - - - - - - - COMM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-061103-124]
73. kif26bb ENSDARG00000024575 18 0.849 - - - - - - - 0.849 - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
74. CR339051.1 CR339051.1 9 0.849 - - - - - - - 0.849 -
75. ZNF70_6 ZNF70_6 15 0.848 - - - - - - - 0.848 -
76. CSMD1 CSMD1 15 0.847 - - - - - - - 0.847 -
77. fxyd6 ENSDARG00000100971 51 0.846 - - - - - - - 0.846 - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
78. si:dkey-273g18.1 ENSDARG00000097405, ENSDARG00000105439 64 0.845 0.845 - - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
79. CU179703.1 CU179703.1 5 0.844 - - - - - - - 0.844 -
80. BX119910.5 BX119910.5 3 0.844 - - - - - - - 0.844 -
81. si:ch211-202h22.7 ENSDARG00000073912 18 0.843 - - - - - - - 0.843 - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
82. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 0.843 - - - - - - - 0.843 - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
83. ripply3 ENSDARG00000036974 30 0.841 - - - - - - - 0.841 - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
84. oxt ENSDARG00000042845 2 0.841 - - - - - - - 0.841 - oxytocin [Source:ZFIN;Acc:ZDB-GENE-030407-1]
85. SH2D1B SH2D1B 60 0.839 - - - - - - - 0.839 -
86. znf653 ENSDARG00000093469 149 0.835 - - - - - - - 0.835 - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
87. CR391998.1 ENSDARG00000091817 15 0.835 - - - - - - - 0.835 - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
88. si:ch211-266l9.1 si:ch211-266l9.1 18 0.834 - - - - - - - 0.834 -
89. plscr3a ENSDARG00000093078 7 0.833 - - - - - - - 0.833 - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
90. RTKN_1 RTKN_1 176 0.83 - - - - - - - 0.830 -
91. U6_18 U6_18 12 0.83 - - - - - - - 0.830 -
92. zdhhc12b ENSDARG00000052787 43 0.829 - - - - - - - 0.829 - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
93. fli1a ENSDARG00000054632 330 0.826 0.826 - - - - - - - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
94. CT573494.2 CT573494.2 58 0.825 0.825 - - - - - - - -
95. vegfc ENSDARG00000069640 198 0.823 0.823 - - - - - - - - vascular endothelial growth factor c [Source:ZFIN;Acc:ZDB-GENE-040303-4]
96. RHOBTB1 ENSDARG00000079468 189 0.822 - - - - - - - 0.822 - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
97. PIK3CA ENSDARG00000075456 39 0.821 - - - - - - - 0.821 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
98. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 0.818 - - - - - - - 0.818 - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
99. BX004873.2 BX004873.2 19 0.818 - - - - - - - 0.818 -
100. col7a1l ENSDARG00000069692 44 0.818 0.818 - - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]

There are 182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA