Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrn1

Gene Name Gene ID Reads Annotation
lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]










Genes with expression patterns similar to lrrn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
2. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 5.098 0.880 - - 0.805 0.857 - 0.950 0.732 0.874 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
3. nrarpb ENSDARG00000018958 6225 4.378 0.918 - - 0.804 0.770 - 0.993 - 0.893 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
4. nes ENSDARG00000088805 2710 4.333 0.968 - 0.833 0.786 - - 0.974 - 0.772 nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
5. si:ch73-21g5.7 ENSDARG00000093156 9412 4.22 0.921 - 0.710 - - - 0.988 0.835 0.766 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
6. nbeaa ENSDARG00000070080 862 4.206 0.916 - - 0.761 - - 0.958 0.703 0.868 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
7. her13 ENSDARG00000007097 2000 4.112 0.899 - - 0.744 - - 0.935 0.713 0.821 hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
8. wu:fc51f04 wu:fc51f04 7074 4.055 - - 0.735 0.844 0.931 - - 0.739 0.806
9. nr2f1a ENSDARG00000052695 5037 4.034 0.719 - 0.884 0.719 0.877 - - - 0.835 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
10. hmp19 2554 3.61 0.943 - - - - - 0.983 0.830 0.854 HMP19 protein
11. nova2 ENSDARG00000017673 7685 3.554 0.946 - - 0.906 - - 0.980 - 0.722 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. tuba1c ENSDARG00000055216 8384 3.536 0.937 - - - - - 0.977 0.728 0.894 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
13. clvs2 ENSDARG00000053122 1390 3.531 0.949 - - - - - 0.970 0.785 0.827 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
14. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.465 0.801 - - 0.844 - - 0.938 - 0.882 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
15. marcksa ENSDARG00000004049 2518 3.457 - - - - 0.874 - 0.845 0.831 0.907 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
16. mllt11 ENSDARG00000071026 2518 3.43 0.870 - - - - - 0.946 0.803 0.811 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
17. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.407 - - - 0.860 - - 0.829 0.813 0.905 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
18. gap43 ENSDARG00000099744 4114 3.374 0.779 - - - - - 0.946 0.752 0.897 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
19. atp6v0cb ENSDARG00000036577 3472 3.355 0.816 - - - 0.771 - 0.985 - 0.783 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
20. C24H17orf96 C24H17orf96 1538 3.35 - - - 0.713 0.870 - 0.884 - 0.883
21. pou3f2a ENSDARG00000070220 817 3.336 - - - 0.805 - - 0.939 0.776 0.816 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
22. CABZ01028287.1 CABZ01028287.1 626 3.331 0.905 - - 0.771 - - 0.870 - 0.785
23. negr1 ENSDARG00000021607 1051 3.314 0.879 - - 0.734 - - 0.889 - 0.812 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
24. fzd3a ENSDARG00000021664 1958 3.313 0.843 - - 0.726 - - 0.902 - 0.842 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
25. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.28 0.924 - - 0.781 - - 0.848 - 0.727 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
26. pou3f3a ENSDARG00000042032 2835 3.276 0.713 - 0.780 0.843 - - 0.940 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
27. ccdc28b ENSDARG00000011222 528 3.253 0.842 - - - 0.783 - 0.858 0.770 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
28. myt1b ENSDARG00000102879 5411 3.248 0.803 - - 0.757 - - 0.954 - 0.734 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
29. her4.3 ENSDARG00000070770 613 3.226 0.728 - - - - - 0.969 0.769 0.760 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
30. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.216 0.746 - - - 0.844 - 0.907 - 0.719 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
31. tmpob ENSDARG00000022978 8121 3.176 0.708 - - 0.747 - - 0.877 - 0.844 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
32. pcdh19 ENSDARG00000034344 2378 3.164 - - - 0.790 - - 0.798 0.708 0.868 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
33. fez1 ENSDARG00000023174 701 3.15 0.740 - - - - - 0.827 0.799 0.784 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
34. coe2 coe2 1633 3.145 - - - 0.725 - - 0.741 0.797 0.882
35. kdm1a ENSDARG00000060679 6152 3.143 0.757 - - 0.775 0.892 - 0.719 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
36. fam60al 2846 3.133 0.793 - - 0.763 - - 0.804 - 0.773 family with sequence similarity 60, member A, like
37. vezf1a ENSDARG00000008247 1449 3.12 0.702 - - 0.794 - - 0.846 - 0.778 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
38. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 3.109 - - 0.743 - - - 0.831 0.769 0.766 scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
39. CT990561.1 ENSDARG00000058284 566 3.08 - - 0.735 0.863 - - 0.708 - 0.774 EPH receptor A5 [Source:NCBI gene;Acc:797595]
40. ilf2 ENSDARG00000014591 14543 3.055 0.709 - - 0.744 - - - 0.761 0.841 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
41. marcksl1b ENSDARG00000035715 37390 3.045 0.711 - 0.782 0.718 - - - - 0.834 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
42. her2 ENSDARG00000038205 3219 2.805 0.953 - - 0.868 - - 0.984 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
43. dla ENSDARG00000010791 9281 2.752 0.931 - - - - - 0.990 - 0.831 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
44. dpysl5a ENSDARG00000011141 1827 2.738 0.863 - - - - - 0.961 - 0.914 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
45. tox ENSDARG00000032317 9126 2.713 0.914 - - - - - 0.955 - 0.844 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
46. tmem35 ENSDARG00000052567 5685 2.69 0.805 - - - - - 0.969 - 0.916 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
47. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.685 0.875 - - - - - 0.994 - 0.816 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
48. SPOCK1 ENSDARG00000074644 794 2.677 0.888 - - - - - 0.979 - 0.810 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
49. nadl1.1 1200 2.675 0.889 - - - - - 0.983 - 0.803 neural adhesion molecule L1.1, transcript variant X1
50. npas3b npas3b 1446 2.672 0.844 - - 0.853 - - 0.975 - -
51. sox2 ENSDARG00000070913 2763 2.672 0.911 - - 0.802 - - 0.959 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
52. ELOVL4 ELOVL4 3026 2.657 0.880 - - - - - 0.882 - 0.895
53. nhlh2 ENSDARG00000025495 1860 2.657 0.846 - - - - - 0.971 - 0.840 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
54. her4.1 ENSDARG00000056732 1264 2.651 0.855 - - - - - 0.914 0.882 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
55. st8sia2 ENSDARG00000018788 2183 2.648 0.821 - - 0.876 - - 0.951 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
56. CABZ01111990.1 CABZ01111990.1 4374 2.639 0.837 - - - - - 0.977 0.825 -
57. st18 663 2.63 - - - - - - 0.969 0.846 0.815 suppression of tumorigenicity 18, zinc finger
58. plp1a ENSDARG00000103732 3544 2.617 0.928 - - 0.710 - - 0.979 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
59. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.615 0.948 - - - - - 0.959 0.708 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
60. TUBA1A ENSDARG00000001889 25294 2.611 0.807 - - 0.815 - - 0.989 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
61. tubb5 ENSDARG00000037997 18691 2.61 0.808 - - 0.861 - - 0.941 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
62. AGO1 ENSDARG00000092644 4521 2.609 0.882 - - - - - 0.959 - 0.768 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
63. FAM171A2 FAM171A2 707 2.609 0.869 - - - - - 0.936 - 0.804
64. cnrip1a ENSDARG00000091683 1491 2.606 0.799 - - - - - 0.978 0.829 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
65. dpysl3 ENSDARG00000002587 4381 2.605 0.789 - - - - - 0.961 - 0.855 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
66. TUBB8P7_1 TUBB8P7_1 2722 2.603 0.807 - - - 0.830 - 0.966 - -
67. UBE2QL1 ENSDARG00000079276 3474 2.601 0.883 - - - 0.813 - 0.905 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
68. epha4b ENSDARG00000011600 3110 2.601 0.902 - - - - - 0.958 - 0.741 eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
69. dld ENSDARG00000020219 4928 2.601 0.838 - - - - - 0.971 - 0.792 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
70. ctnnd2b ENSDARG00000003779 964 2.598 0.914 - - - - - 0.969 - 0.715 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
71. bhlhe22 ENSDARG00000058039 1673 2.59 0.897 - - - - - 0.953 0.740 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
72. sox21b ENSDARG00000008540 1460 2.59 0.870 - - - - - 0.989 0.731 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
73. slc17a6b ENSDARG00000041150 823 2.588 0.878 - - - - - 0.944 - 0.766 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
74. lfng ENSDARG00000037879 11783 2.587 0.883 - - 0.862 - - - - 0.842 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
75. PPP2R5B ENSDARG00000054931 213 2.58 0.923 - - - - - 0.876 - 0.781 protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
76. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.569 - - - - - - 0.918 0.860 0.791 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
77. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.568 0.877 - - 0.718 - - 0.973 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
78. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.563 0.922 - - 0.755 - - - - 0.886 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
79. hnrnpub ENSDARG00000004735 16496 2.556 - - - 0.801 - - 0.853 - 0.902 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
80. fyna ENSDARG00000011370 1679 2.551 0.866 - - 0.761 - - 0.924 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
81. TMEM57 TMEM57 260 2.547 - - - - - - 0.915 0.726 0.906
82. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.544 - - - - - - 0.923 0.768 0.853
83. gnao1a ENSDARG00000016676 8184 2.537 0.794 - - - - - 0.974 - 0.769 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
84. cspg5a ENSDARG00000069981 1699 2.531 0.824 - - 0.743 - - 0.964 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
85. C8H1orf106 C8H1orf106 2690 2.53 0.853 - - - - - 0.941 - 0.736
86. tuba2 ENSDARG00000045014 1490 2.53 - - - - - - 0.891 0.784 0.855 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
87. rap2ip rap2ip 681 2.53 - - - - - - 0.955 0.739 0.836
88. hmgb3a ENSDARG00000056725 15668 2.527 0.838 - - - - - 0.854 - 0.835 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
89. lhx1a ENSDARG00000014018 958 2.524 0.816 - - - - - 0.915 - 0.793 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
90. Sep-03 Sep-03 1124 2.519 0.746 - - - - - 0.906 - 0.867
91. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.518 - - - - - - 0.877 0.804 0.837 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
92. dnajc5aa ENSDARG00000042948 2885 2.514 0.770 - - - - - 0.968 - 0.776 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
93. thsd7a thsd7a 194 2.513 0.808 - - - - - 0.994 - 0.711
94. CLIP3 ENSDARG00000054456 734 2.51 0.814 - - - - - 0.949 - 0.747 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
95. zic5 ENSDARG00000016022 1034 2.51 - 0.830 - - 0.818 - 0.862 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
96. nell2b ENSDARG00000062797 854 2.508 0.816 - - - - - 0.965 0.727 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
97. ldb1a ENSDARG00000010137 3035 2.508 - 0.892 - - - - - 0.762 0.854 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
98. lppr3a lppr3a 1294 2.499 - - - - - - 0.791 0.826 0.882
99. gdf11 ENSDARG00000044924 534 2.498 - - - 0.771 - - 0.936 - 0.791 growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
100. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.495 - - - - 0.814 - - 0.801 0.880 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]

There are 2380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA