Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrk2

Gene Name Gene ID Reads Annotation
lrrk2 ENSDARG00000006169 82 leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]










Genes with expression patterns similar to lrrk2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrk2 ENSDARG00000006169 82 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
2. TMEM116 TMEM116 96 1.745 - 0.910 - - - 0.835 - - -
3. hnmt ENSDARG00000012796 302 1.726 - 0.772 - - - 0.954 - - - histamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040801-157]
4. si:dkey-97a13.9 si:dkey-97a13.9 169 1.708 - 0.809 - - - 0.899 - - -
5. vstm4a ENSDARG00000010154 129 1.705 0.805 - - - - 0.900 - - - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
6. si:ch211-255a21.4 si:ch211-255a21.4 26 1.691 0.911 0.780 - - - - - - -
7. ARX ARX 71 1.691 0.911 0.780 - - - - - - -
8. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1.688 - 0.780 - - - 0.908 - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
9. si:dkey-277m11.2 ENSDARG00000094879 15 1.671 0.819 - - - - 0.852 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
10. med15 ENSDARG00000014292 57 1.666 - 0.810 - - - 0.856 - - - mediator complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2032]
11. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1.655 0.911 - - - - 0.744 - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
12. si:ch73-299h12.3 ENSDARG00000101790 590 1.65 0.928 - - - - - 0.722 - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
13. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.648 - 0.796 - - - 0.852 - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
14. si:dkey-78a14.4 ENSDARG00000036066 17 1.632 - 0.780 - - - 0.852 - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
15. si:ch211-153l6.4 si:ch211-153l6.4 45 1.623 0.917 - - - 0.706 - - - -
16. CABZ01089980.1 ENSDARG00000117446 16 1.619 0.839 0.780 - - - - - - -
17. mir92b 95 1.596 - 0.780 - - - 0.816 - - - microRNA 92b
18. si:ch211-281g2.4 si:ch211-281g2.4 121 1.588 - - - - 0.753 0.835 - - -
19. fam46a fam46a 92 1.585 - 0.792 - - - 0.793 - - -
20. faxcb ENSDARG00000078981 249 1.585 0.749 0.836 - - - - - - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
21. SMAD4_1 SMAD4_1 377 1.572 0.725 - - - - - 0.847 - -
22. wdr45l wdr45l 123 1.571 0.831 - - - - 0.740 - - -
23. fbxo41 ENSDARG00000078908 95 1.555 - 0.780 0.775 - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
24. fam20c fam20c 603 1.552 - 0.789 - - - 0.763 - - -
25. dkk1a ENSDARG00000014103 71 1.539 - - 0.773 - - 0.766 - - - dickkopf WNT signaling pathway inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-090313-406]
26. si:dkey-234h16.7 ENSDARG00000095754 115 1.518 0.814 - - - - 0.704 - - - si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
27. GAS2_1 GAS2_1 16 1.488 - 0.780 - - - - - 0.708 -
28. BX530018.3 ENSDARG00000107022 614 1.436 - 0.701 - - 0.735 - - - -
29. zgc:174224_2 ENSDARG00000093875 22 1.435 - 0.719 - - - - 0.716 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
30. ABHD12B_1 ABHD12B_1 57 1.433 - - - - 0.733 0.700 - - -
31. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.969 - 0.969 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
32. vcana ENSDARG00000103515 611 0.965 - - - - - 0.965 - - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
33. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.964 - - - - - 0.964 - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
34. C9H3orf70 C9H3orf70 225 0.962 - - - - - 0.962 - - -
35. si:ch211-208f21.2 ENSDARG00000094177 61 0.943 - - - - 0.943 - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
36. APOLD1 APOLD1 56 0.938 - - - - - 0.938 - - -
37. si:dkey-253d23.3 ENSDARG00000095643 66 0.938 0.938 - - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
38. si:dkey-262g12.3 ENSDARG00000094612 41 0.937 - 0.937 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
39. CABZ01069022.1 ENSDARG00000105692 16 0.931 0.931 - - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
40. si:dkey-22i16.7 ENSDARG00000094910 47 0.931 0.931 - - - - - - - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
41. mapk8ip2 ENSDARG00000063157 467 0.926 - 0.926 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
42. SMARCC2 ENSDARG00000077946 702 0.926 - 0.926 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
43. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 0.925 - - - - - 0.925 - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
44. CRP CRP 136 0.924 - - - - - 0.924 - - -
45. si:ch211-136m16.8 ENSDARG00000090767 91 0.919 0.919 - - - - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
46. alox5ap ENSDARG00000054755, ENSDARG00000113460 52 0.919 0.919 - - - - - - - - arachidonate 5-lipoxygenase-activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-9322]
47. plekho1b ENSDARG00000077499 21 0.919 0.919 - - - - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
48. zgc:165582 ENSDARG00000074362 198 0.919 0.919 - - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
49. CABZ01026370.1 CABZ01026370.1 286 0.913 - 0.913 - - - - - - -
50. mfge8a ENSDARG00000015349 66 0.912 - - - - - 0.912 - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
51. crym ENSDARG00000062817 171 0.911 0.911 - - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
52. FCHSD2 FCHSD2 35 0.911 0.911 - - - - - - - -
53. CU929036.1 CU929036.1 7 0.911 0.911 - - - - - - - -
54. si:ch211-229g14.3 ENSDARG00000095101 5 0.911 0.911 - - - - - - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
55. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 0.911 0.911 - - - - - - - -
56. PPP2R2A PPP2R2A 50 0.911 0.911 - - - - - - - -
57. VASP VASP 22 0.911 0.911 - - - - - - - -
58. INF2 37 0.911 0.911 - - - - - - - - inverted formin, FH2 and WH2 domain containing
59. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.911 0.911 - - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
60. U3_9 U3_9 4 0.911 0.911 - - - - - - - -
61. ampd2 ampd2 6 0.911 0.911 - - - - - - - -
62. bik ENSDARG00000045549 18 0.911 0.911 - - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
63. si:dkey-228i19.34 si:dkey-228i19.34 43 0.911 0.911 - - - - - - - -
64. si:dkey-225k4.1 ENSDARG00000092045 47 0.911 0.911 - - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
65. si:ch211-133l5.4 ENSDARG00000092533 5 0.911 0.911 - - - - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
66. oprl1 ENSDARG00000071209 58 0.911 0.911 - - - - - - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
67. PEG3_7 PEG3_7 15 0.911 0.911 - - - - - - - -
68. RNF39 RNF39 52 0.911 0.911 - - - - - - - -
69. wu:fb63a08 38 0.911 0.911 - - - - - - - - wu:fb63a08
70. si:dkey-222h21.11 ENSDARG00000092984 13 0.911 0.911 - - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
71. si:dkey-29b11.3 ENSDARG00000087388 29 0.911 0.911 - - - - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
72. SLC39A11 ENSDARG00000098194 23 0.911 0.911 - - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
73. zbtb14 ENSDARG00000098273 36 0.911 0.911 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
74. fgfr1b ENSDARG00000011190 10 0.911 0.911 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
75. rtn4r ENSDARG00000090035 46 0.91 - 0.910 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
76. si:ch211-76l23.6 si:ch211-76l23.6 68 0.91 - 0.910 - - - - - - -
77. ovca2 ENSDARG00000103748 38 0.91 - 0.910 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
78. parp12a ENSDARG00000042496 82 0.91 - 0.910 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
79. wdr47a ENSDARG00000078136 522 0.909 0.909 - - - - - - - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
80. ARHGAP44 ENSDARG00000104549 91 0.907 0.907 - - - - - - - - Rho GTPase activating protein 44 [Source:ZFIN;Acc:ZDB-GENE-120206-2]
81. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.906 0.906 - - - - - - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
82. znf692 ENSDARG00000078434 137 0.905 0.905 - - - - - - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
83. slc27a2a ENSDARG00000036237 166 0.905 - - - - - 0.905 - - - solute carrier family 27 (fatty acid transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-050706-104]
84. slc15a4 ENSDARG00000102612 1096 0.904 - - - - - 0.904 - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
85. pex2 ENSDARG00000062421 83 0.904 - - - - - - 0.904 - - peroxisomal biogenesis factor 2 [Source:ZFIN;Acc:ZDB-GENE-070530-2]
86. RCVRN RCVRN 66 0.903 0.903 - - - - - - - -
87. CR759791.1 ENSDARG00000088591 160 0.902 0.902 - - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
88. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 0.902 0.902 - - - - - - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
89. gfod2 ENSDARG00000061145 263 0.902 - - - - - 0.902 - - - glucose-fructose oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-64]
90. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 0.901 - - - - - 0.901 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
91. CR339053.3 CR339053.3 244 0.9 0.900 - - - - - - - -
92. CABZ01075275.1 CABZ01075275.1 124 0.9 - - - - - 0.900 - - -
93. si:dkeyp-110e4.11 ENSDARG00000071585 148 0.9 0.900 - - - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
94. si:dkey-29n10.3 si:dkey-29n10.3 66 0.896 0.896 - - - - - - - -
95. si:dkey-23c22.1 si:dkey-23c22.1 133 0.896 - - - - - 0.896 - - -
96. si:ch211-184m19.3 si:ch211-184m19.3 46 0.896 0.896 - - - - - - - -
97. dguok ENSDARG00000075395, ENSDARG00000111034, ENSDARG00000114526 93 0.895 - - - - - - 0.895 - - deoxyguanosine kinase [Source:ZFIN;Acc:ZDB-GENE-040625-14]
98. PTGFRN ENSDARG00000075505 73 0.895 0.895 - - - - - - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
99. TOR4A_1 TOR4A_1 20 0.895 0.895 - - - - - - - -
100. mmp13b ENSDARG00000100794 38 0.895 0.895 - - - - - - - - matrix metallopeptidase 13b [Source:ZFIN;Acc:ZDB-GENE-030131-6152]

There are 1101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA