Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrrfip2

Gene Name Gene ID Reads Annotation
lrrfip2 ENSDARG00000010400 2633 leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]










Genes with expression patterns similar to lrrfip2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrfip2 ENSDARG00000010400 2633 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
2. cmtm6 ENSDARG00000099631 641 2.548 0.802 - - 0.931 - 0.815 - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
3. usf2 ENSDARG00000020228 2667 2.541 0.826 0.723 - - 0.992 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
4. wif1 ENSDARG00000005541 1689 2.5 - 0.829 0.703 - 0.968 - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
5. MRPL52 ENSDARG00000090568 4402 2.481 0.805 - 0.796 0.880 - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
6. map3k7 ENSDARG00000020469 2845 2.478 0.817 0.804 0.857 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
7. golga7 ENSDARG00000057676 4691 2.476 0.824 - - 0.764 0.888 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
8. fam129ba ENSDARG00000062970 1578 2.468 0.725 0.759 - - 0.984 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
9. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 2.459 - 0.902 - 0.822 - - 0.735 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
10. KIAA0355 3250 2.449 0.726 0.885 - - - - 0.838 - - KIAA0355 ortholog, transcript variant X1
11. zdhhc17 ENSDARG00000070441 1073 2.407 - 0.789 - 0.887 - - 0.731 - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
12. pdk1 ENSDARG00000013128 526 2.371 0.753 0.857 - - - - 0.761 - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
13. golgb1 ENSDARG00000061951 2023 2.281 - 0.707 0.820 - - 0.754 - - - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
14. gars ENSDARG00000059070 17015 2.256 - - - 0.718 - 0.727 0.811 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
15. rerea ENSDARG00000077353 4162 2.247 0.757 - 0.787 - - 0.703 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
16. cdan1 ENSDARG00000042261 658 1.891 - - - 0.899 0.992 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
17. PARD3B PARD3B 401 1.84 - 0.910 - 0.930 - - - - -
18. arhgap29b ENSDARG00000017748 812 1.837 - - 0.849 - 0.988 - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
19. rybpa ENSDARG00000037773 904 1.831 - - - 0.841 0.990 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
20. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.829 - - 0.852 - 0.977 - - - -
21. dhx9 ENSDARG00000079725 1241 1.824 - - - 0.845 0.979 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
22. mns1 ENSDARG00000060169, ENSDARG00000110835 283 1.816 - - 0.872 0.944 - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
23. tdrd3 ENSDARG00000025421 633 1.808 - 0.862 - 0.946 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
24. zdhhc6 ENSDARG00000075721 1494 1.796 - 0.876 - 0.920 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
25. nop10 ENSDARG00000104227 2463 1.794 0.852 - - - 0.942 - - - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
26. trub2 ENSDARG00000028379 783 1.788 - - 0.884 0.904 - - - - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
27. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.782 - - 0.801 - 0.981 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
28. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.778 - 0.908 0.870 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
29. vps39 ENSDARG00000074471 684 1.775 - 0.879 - 0.896 - - - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
30. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.774 - - - - 0.916 0.858 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
31. cnpy1 ENSDARG00000003757 1132 1.773 - 0.786 - - 0.987 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
32. smim7 ENSDARG00000074848 1260 1.773 - 0.926 0.847 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
33. ccnb1 ENSDARG00000051923 3226 1.773 - 0.782 - - 0.991 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
34. GID4 ENSDARG00000079482 1375 1.772 - 0.941 0.831 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
35. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.768 - - - 0.795 0.973 - - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
36. tdg tdg 3269 1.768 - - - 0.822 0.946 - - - -
37. bbs4 ENSDARG00000063522 247 1.76 - 0.847 - 0.913 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
38. MDC1 ENSDARG00000086764 1851 1.758 - - - - 0.974 0.784 - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
39. anapc1 ENSDARG00000075687 488 1.756 - - - 0.763 0.993 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
40. gpr98 gpr98 717 1.755 - - - 0.769 0.986 - - - -
41. trappc2 ENSDARG00000097660 760 1.747 - - 0.865 0.882 - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
42. arid1ab ENSDARG00000101891 1722 1.742 - - - - 0.974 - 0.768 - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
43. fzd1 ENSDARG00000106062 1581 1.741 - - - - 0.975 0.766 - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
44. CR548630.1 CR548630.1 3301 1.738 - 0.856 - 0.882 - - - - -
45. rnd3b ENSDARG00000007396 881 1.732 - 0.873 0.859 - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
46. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.731 - 0.895 - 0.836 - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
47. cdc14ab ENSDARG00000057016 1016 1.728 - - - 0.743 0.985 - - - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
48. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.726 - 0.866 0.860 - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
49. lhfp 700 1.723 - 0.887 0.836 - - - - - - lipoma HMGIC fusion partner
50. klf15 ENSDARG00000091127 1037 1.718 - 0.854 0.864 - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
51. suv39h1b ENSDARG00000055753 1540 1.715 - - 0.852 0.863 - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
52. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.706 - - - 0.734 0.972 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
53. zgc:111974 zgc:111974 1386 1.703 0.713 - - - 0.990 - - - -
54. cxxc1 cxxc1 914 1.703 - 0.858 - 0.845 - - - - -
55. e2f8 ENSDARG00000057323 1432 1.702 - 0.932 - - - 0.770 - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
56. zcchc17 ENSDARG00000018936 1577 1.7 - - - 0.738 0.962 - - - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
57. CASKIN2_1 CASKIN2_1 2299 1.7 0.713 - - - 0.987 - - - -
58. epb41l4a ENSDARG00000040087 1013 1.699 - 0.860 - 0.839 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
59. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.697 - 0.907 - - - 0.790 - - - exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
60. bcs1l ENSDARG00000012295 664 1.697 - 0.903 - 0.794 - - - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
61. cib1 ENSDARG00000103118 291 1.694 0.813 0.881 - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
62. znf710a ENSDARG00000014680 582 1.69 - 0.752 - 0.938 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
63. CABZ01062452.1 CABZ01062452.1 1721 1.689 - 0.859 - 0.830 - - - - -
64. nat15 ENSDARG00000061185 396 1.687 - - - 0.945 - 0.742 - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
65. lzic ENSDARG00000055899 638 1.685 0.807 - - 0.878 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
66. rac3b ENSDARG00000020795 1523 1.684 - 0.893 - 0.791 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
67. bmpr1ba ENSDARG00000104100 828 1.684 0.841 0.843 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
68. sec22a ENSDARG00000078328 1207 1.682 0.746 0.936 - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
69. VPS37B_1 VPS37B_1 1816 1.68 - - 0.864 0.816 - - - - -
70. ARHGEF17 ENSDARG00000101644 625 1.678 - 0.844 0.834 - - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
71. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.67 0.803 - 0.867 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
72. mto1 ENSDARG00000055679 859 1.669 0.824 0.845 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
73. pi4k2b ENSDARG00000013881 1337 1.668 0.830 - - - - 0.838 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
74. ttc14 ENSDARG00000013845 1192 1.663 - - - 0.879 - - 0.784 - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
75. src ENSDARG00000008107 3643 1.658 - - 0.797 - 0.861 - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
76. ctdspla ENSDARG00000071673 1447 1.657 - 0.855 - 0.802 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
77. Metazoa_SRP_7 Metazoa_SRP_7 513 1.656 0.757 0.899 - - - - - - -
78. mdm4 ENSDARG00000057513 1954 1.656 - 0.869 0.787 - - - - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
79. ppat ENSDARG00000004517 3349 1.656 - - - 0.730 0.926 - - - - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
80. fkbp7 ENSDARG00000010962 2986 1.654 - - - - 0.932 - 0.722 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
81. TRIM14 TRIM14 1424 1.652 0.742 0.910 - - - - - - -
82. ahsa1l ahsa1l 2366 1.651 0.852 - 0.799 - - - - - -
83. loxl2b ENSDARG00000044074 1919 1.646 0.765 0.881 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
84. TRIP10 TRIP10 1079 1.645 - - 0.844 0.801 - - - - -
85. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.642 - - - - 0.864 0.778 - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
86. pcdh10a ENSDARG00000099729 2214 1.642 - 0.782 - - 0.860 - - - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
87. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.64 - - - 0.917 - 0.723 - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
88. txnl1 ENSDARG00000011921 692 1.639 0.751 - - 0.888 - - - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
89. C6H6orf106 C6H6orf106 2940 1.639 0.813 - - 0.826 - - - - -
90. zgc:171497 ENSDARG00000100614 1040 1.638 - - 0.844 0.794 - - - - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
91. zfyve21 ENSDARG00000027887 1687 1.637 - - 0.836 0.801 - - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
92. sumo3b ENSDARG00000035993 3414 1.637 0.793 0.844 - - - - - - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
93. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.637 - - 0.830 0.807 - - - - - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
94. mrps25 ENSDARG00000041306 3654 1.636 - 0.824 0.812 - - - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
95. plcg1 ENSDARG00000038442 5324 1.636 - 0.816 0.820 - - - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
96. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.635 - 0.902 - - - 0.733 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
97. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.634 0.737 0.897 - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
98. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.633 - - 0.860 0.773 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
99. mccc2 ENSDARG00000017571 5635 1.633 0.823 - - - - - 0.810 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
100. ZBTB16 ZBTB16 3385 1.631 0.807 0.824 - - - - - - -

There are 2194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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