Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrrfip1a

Gene Name Gene ID Reads Annotation
lrrfip1a ENSDARG00000030012 1263 leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]










Genes with expression patterns similar to lrrfip1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrfip1a ENSDARG00000030012 1263 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
2. cacng1 cacng1 3118 3.212 0.727 0.898 - - - 0.811 0.776 - -
3. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.133 0.716 0.861 - - - 0.750 0.806 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
4. ryr3 ENSDARG00000071331 6795 3.085 0.718 0.831 - - - 0.715 0.821 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
5. txlnbb ENSDARG00000076241 6396 3.068 0.703 0.808 - - - 0.714 0.843 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
6. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.925 0.731 0.732 - - - 0.747 0.715 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
7. ITGB1BP2 ENSDARG00000030176 2472 2.457 0.766 0.874 - - - - 0.817 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
8. si:ch211-242b18.1 ENSDARG00000054723 2929 2.423 - 0.769 - - - 0.786 0.868 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
9. lin7a ENSDARG00000013414 1589 2.419 0.745 0.850 - - - - 0.824 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
10. C13H10orf71 3489 2.413 0.780 0.886 - - - - 0.747 - - chromosome 13 C10orf71 homolog
11. klhl40a ENSDARG00000039052 2537 2.397 - 0.833 - - - 0.700 0.864 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
12. limch1a ENSDARG00000074275 2981 2.38 - 0.754 - - - 0.825 0.801 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
13. asb5b ENSDARG00000053222 1207 2.371 0.849 0.706 - - - - 0.816 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
14. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.363 - 0.842 - - - 0.740 0.781 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
15. hapln1a ENSDARG00000089769 12334 2.329 0.702 0.837 - - - - 0.790 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
16. alpk3a ENSDARG00000078989 1992 2.327 0.760 0.810 - - - - 0.757 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
17. pygma ENSDARG00000055518 15972 2.313 0.717 0.816 - - - - 0.780 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
18. myoz2a ENSDARG00000012311 1373 2.304 - 0.857 - - - 0.705 0.742 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
19. obsl1b ENSDARG00000077388 2511 2.301 0.749 0.804 - - - - 0.748 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
20. fxr1 ENSDARG00000022968 2831 2.299 0.721 - - - - 0.748 0.830 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
21. fermt2 ENSDARG00000020242 9351 2.291 0.758 - - - - 0.713 0.820 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
22. mtdhb ENSDARG00000004939 1225 2.285 0.791 0.780 - - - - 0.714 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
23. CU633479.5 ENSDARG00000114818 1815 2.282 - 0.800 - - 0.718 - 0.764 - -
24. CU467854.2 CU467854.2 298 2.265 0.711 0.781 - - - - 0.773 - -
25. zgc:92518 ENSDARG00000016343 3837 2.257 0.750 - - - - 0.700 0.807 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. rpf2 ENSDARG00000043960 2719 2.253 0.701 0.829 - - - 0.723 - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
27. enah ENSDARG00000032049 1526 2.245 - 0.747 - - - 0.751 0.747 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
28. mdh1b ENSDARG00000018008 3196 2.242 0.701 0.725 - - - - 0.816 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
29. myhc4 ENSDARG00000035438 1322 2.229 - 0.721 - - - 0.761 0.747 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
30. akap6 ENSDARG00000077295 1382 2.227 0.714 0.793 - - - - 0.720 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
31. ppapdc3 ppapdc3 4924 2.225 0.709 - - - - 0.718 0.798 - -
32. mdh2 ENSDARG00000043371 14485 2.218 0.720 - - - - - 0.784 - 0.714 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
33. timm8b ENSDARG00000055708 7291 2.194 0.701 0.739 - - - - 0.754 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
34. sox6 ENSDARG00000015536 7728 2.182 0.718 - - - - 0.729 0.735 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
35. tnnt2d ENSDARG00000002988 7590 2.142 0.719 0.700 - - - - 0.723 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
36. chrna1 ENSDARG00000009021 2931 1.716 - 0.911 - - - - 0.805 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
37. mef2aa ENSDARG00000031756 2699 1.706 - 0.872 - - - - 0.834 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
38. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.693 - 0.915 - - - - 0.778 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
39. cap2 ENSDARG00000104478 3266 1.691 - 0.905 - - - - 0.786 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
40. BX294434.1 ENSDARG00000061272 6493 1.684 - 0.873 - - - - 0.811 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
41. mybphb ENSDARG00000003081 5208 1.676 - 0.898 - - - - 0.778 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
42. DNAJA4 ENSDARG00000051762 5657 1.676 - 0.867 - - - - 0.809 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
43. gypc ENSDARG00000041546 1487 1.676 - 0.828 - - - - 0.848 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
44. ryr1b ENSDARG00000023797 5693 1.663 - 0.852 - - - - 0.811 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
45. six1b ENSDARG00000026473 1908 1.663 - 0.921 - - - - 0.742 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
46. rp42-pen rp42-pen 3395 1.661 - 0.883 - - - - 0.778 - -
47. smyd2a ENSDARG00000055151 2505 1.649 0.812 - - - - - 0.837 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
48. zgc:158296 ENSDARG00000070923 3935 1.645 - 0.825 - - - - 0.820 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
49. ntmt1 ENSDARG00000022399 5779 1.644 - 0.858 - - - - 0.786 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
50. MYOT ENSDARG00000076312 1791 1.644 - 0.921 - - - - 0.723 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
51. pbxip1a ENSDARG00000071015 4960 1.643 - 0.825 - - - - 0.818 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
52. mef2d ENSDARG00000040237 6144 1.635 0.766 0.869 - - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
53. hfe2 4113 1.635 0.731 0.904 - - - - - - - hemochromatosis type 2
54. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.634 - 0.816 - - - - 0.818 - -
55. znf106a ENSDARG00000016651 6049 1.633 - 0.822 - - - - 0.811 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
56. PTPLA PTPLA 4044 1.632 - 0.808 - - - - 0.824 - -
57. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.632 - 0.847 - - - - 0.785 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
58. srl ENSDARG00000104587 11126 1.631 - 0.839 - - - - 0.792 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
59. hhatla ENSDARG00000039051 6598 1.631 - 0.825 - - - - 0.806 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
60. nmrk2 ENSDARG00000067848 10293 1.63 - 0.837 - - - - 0.793 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
61. asb2a asb2a 845 1.624 - 0.855 - - - - 0.769 - -
62. fitm1 ENSDARG00000056464 1759 1.622 - 0.812 - - - - 0.810 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
63. sptb ENSDARG00000030490 7128 1.622 - 0.798 - - - - 0.824 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
64. COL22A1 COL22A1 4473 1.621 - 0.777 - - - - 0.844 - -
65. cfl2 ENSDARG00000014106 8051 1.618 - 0.916 - - - - 0.702 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
66. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.617 - 0.838 - - - - 0.779 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
67. dtnba ENSDARG00000077694 5483 1.615 - 0.771 - - - 0.844 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
68. trim55a ENSDARG00000029596 2858 1.615 - 0.790 - - - - 0.825 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
69. EHBP1L1 EHBP1L1 2500 1.611 - 0.815 - - - - 0.796 - -
70. mrpl44 ENSDARG00000094277 1778 1.609 0.742 0.867 - - - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
71. sh3bgr ENSDARG00000021633 3498 1.609 - 0.774 - - - - 0.835 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
72. foxc1b ENSDARG00000055398 1499 1.606 - 0.839 - - - 0.767 - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
73. trdn ENSDARG00000041779 4283 1.604 - 0.793 - - - - 0.811 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
74. ablim2 ENSDARG00000055223 1934 1.603 - - - - - 0.811 0.792 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
75. prx ENSDARG00000017246 6183 1.602 - 0.795 - - - - 0.807 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
76. klhl21 ENSDARG00000039255 2550 1.602 - 0.827 - - - - 0.775 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
77. myf6 ENSDARG00000029830 1911 1.586 - 0.785 - - - - 0.801 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
78. sar1ab ENSDARG00000033320 3984 1.586 0.740 - - - - - 0.846 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
79. slc43a1b ENSDARG00000037748 1406 1.586 - 0.753 - - - - 0.833 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
80. eef2k ENSDARG00000035835 2906 1.585 - 0.714 - - - - 0.871 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
81. NRAP ENSDARG00000009341 3565 1.585 - 0.773 - - - - 0.812 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
82. bag3 ENSDARG00000039486 1087 1.585 - 0.859 - - - 0.726 - - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
83. tnw 16679 1.584 - 0.796 - - - - 0.788 - - tenascin W, transcript variant X2
84. agla ENSDARG00000103811 2856 1.584 - - - - - 0.772 0.812 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
85. fbxl22 ENSDARG00000096995 1290 1.581 - 0.834 - - - - 0.747 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
86. TRIM63 TRIM63 1600 1.579 - 0.751 - - - - 0.828 - -
87. TMPO TMPO 3264 1.579 - 0.756 - - - - 0.823 - -
88. xirp2a ENSDARG00000071113 7113 1.578 - 0.778 - - - - 0.800 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
89. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.578 0.761 - - - - - 0.817 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
90. BX530018.3 ENSDARG00000107022 614 1.577 - 0.770 - - - - 0.807 - -
91. chrnd ENSDARG00000019342 2728 1.575 - 0.788 - - - - 0.787 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
92. CU638714.1 ENSDARG00000100303 2132 1.575 - 0.798 - - - - 0.777 - -
93. alpk2 ENSDARG00000079637 1483 1.575 - 0.805 - - - - 0.770 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
94. unc45b ENSDARG00000008433 8298 1.575 - - - 0.729 - - 0.846 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
95. mrpl38 ENSDARG00000039667 1145 1.573 - 0.857 - - - - 0.716 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
96. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.573 0.735 0.838 - - - - - - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
97. actn3b ENSDARG00000001431 15747 1.573 0.759 0.814 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
98. zgc:66479 ENSDARG00000008732 3347 1.57 - 0.738 - - - - 0.832 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
99. smyd1b ENSDARG00000091253 4964 1.569 0.731 0.838 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
100. dyrk2 ENSDARG00000094646 2163 1.569 - 0.784 - - - - 0.785 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]

There are 1052 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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