Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc48

Gene Name Gene ID Reads Annotation
lrrc48 lrrc48 50










Genes with expression patterns similar to lrrc48

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc48 lrrc48 50 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. GALNT16 ENSDARG00000053190 250 2.274 - - 0.792 0.751 - - - 0.731 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
3. CABZ01015475.1 ENSDARG00000104841 6 2 - 1.000 - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
4. si:dkey-71b5.7 ENSDARG00000080675 94 1.949 - - 0.961 0.988 - - - - - si:dkey-71b5.7 [Source:ZFIN;Acc:ZDB-GENE-100922-124]
5. ccdc170 ENSDARG00000016161 18 1.916 - - 0.916 - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
6. iqsec2 iqsec2 304 1.911 0.937 - - 0.974 - - - - -
7. sp5l ENSDARG00000115868 361 1.908 - - - - - - 1.000 0.908 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
8. zte25 zte25 29 1.908 - 1.000 - - - - - - 0.908
9. si:ch73-44m9.2 ENSDARG00000094821 101 1.907 - 0.914 - 0.993 - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
10. nkx1.2la ENSDARG00000006350 76 1.903 - - 0.903 - - - 1.000 - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
11. nfatc1 ENSDARG00000036168 16 1.871 - 0.871 - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
12. rnf32 ENSDARG00000060035, ENSDARG00000116092 122 1.86 - - - 0.994 - - 0.866 - - ring finger protein 32 [Source:ZFIN;Acc:ZDB-GENE-061013-39]
13. CCDC23 CCDC23 54 1.851 1.000 - - - - - - 0.851 -
14. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.84 - - 0.941 - - - - 0.899 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
15. xrra1 ENSDARG00000089578 18 1.839 - - 0.839 - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
16. CABZ01064671.1 ENSDARG00000039935 21 1.83 - - 0.830 - - - 1.000 - -
17. CR388042.1 ENSDARG00000106267 18 1.83 - 0.920 - - - - 0.910 - -
18. mctp1b ENSDARG00000060871 20 1.828 - 0.914 - - - - - 0.914 - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
19. C8H1orf194 C8H1orf194 111 1.828 - - - 0.973 - - 0.855 - -
20. trim3a ENSDARG00000063711 44 1.823 - 0.823 - - - - 1.000 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
21. MAP3K2 ENSDARG00000062884 34 1.821 - - 0.821 - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
22. CMA1_4 CMA1_4 23 1.818 - - 0.818 - - - 1.000 - -
23. figf 48 1.797 - - 0.820 0.977 - - - - - c-fos induced growth factor, transcript variant X2
24. aasdh ENSDARG00000022730 13 1.791 - 0.914 - - - - - - 0.877 aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
25. slc9a5 ENSDARG00000078560 76 1.786 - 0.914 - - - - - 0.872 - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
26. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.774 0.774 - - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
27. zgc:195633_1 142 1.757 - 0.757 - - - - 1.000 - - zgc:195633
28. cradd ENSDARG00000028192 153 1.755 - 0.947 - - - - - - 0.808 CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
29. CCHCR1 CCHCR1 238 1.754 - - - 0.869 - - 0.885 - -
30. C11H1orf116 C11H1orf116 9 1.754 0.774 0.980 - - - - - - -
31. pou5f3 ENSDARG00000044774 212 1.751 - - - - - - - 0.877 0.874 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
32. s100b ENSDARG00000057598 41 1.734 - 0.842 - - - - 0.892 - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
33. hgd ENSDARG00000058005 437 1.734 - 0.894 0.840 - - - - - - homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
34. mipol1 ENSDARG00000104845 6 1.732 - 0.914 0.818 - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
35. ccdc11 ccdc11 79 1.728 - - 0.861 - - - - 0.867 -
36. n4bp2 ENSDARG00000061451, ENSDARG00000113406 238 1.724 - - - 0.973 - - 0.751 - - NEDD4 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-061103-451]
37. tmeff1a ENSDARG00000008191 74 1.72 - - - - - - 0.953 - 0.767 transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
38. si:dkey-14a7.2 si:dkey-14a7.2 61 1.72 - 1.000 - - - - - 0.720 -
39. dnaaf2 ENSDARG00000103132 24 1.719 - 0.914 0.805 - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
40. si:dkey-147f3.8 ENSDARG00000092166 28 1.715 - - 0.924 - - - - - 0.791 si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
41. NF1 NF1 62 1.714 - 0.763 - - - - 0.951 - -
42. CDH12 CDH12 44 1.714 - - - - 0.873 - 0.841 - -
43. CU183952.1 CU183952.1 32 1.711 - - - - - - - 0.890 0.821
44. map6 map6 70 1.705 - - 0.937 - - - 0.768 - -
45. zgc:171422 ENSDARG00000104715 255 1.705 - 0.719 - 0.986 - - - - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
46. msxe msxe 362 1.693 - - - 0.940 - - - 0.753 -
47. BX649554.3_1 BX649554.3_1 1071 1.691 0.716 - - 0.975 - - - - -
48. klc4_1 ENSDARG00000086985 22 1.688 0.774 0.914 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
49. grin2ca ENSDARG00000078149 13 1.682 - - - - - - 0.798 - 0.884 glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
50. d2hgdh ENSDARG00000060210 362 1.669 - 0.763 - - - - - - 0.906 D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
51. bbs12 ENSDARG00000016112 38 1.665 - 0.836 - - - - - 0.829 - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
52. trpc1 ENSDARG00000061203 62 1.665 - - - - 0.832 - 0.833 - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
53. slc34a2b ENSDARG00000036864 652 1.66 - 0.927 - - - - - - 0.733 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030709-1]
54. THEM6 ENSDARG00000103914 49 1.655 - 0.833 - - - - 0.822 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
55. BX324003.2 ENSDARG00000109802 178 1.652 - - - 0.909 - - - - 0.743
56. OVOL1 75 1.65 - - - 0.815 - - - - 0.835 ovo-like zinc finger 1, transcript variant X1
57. siae ENSDARG00000040527, ENSDARG00000111850 186 1.649 - 0.788 - - - - - - 0.861 sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
58. zgc:193811 ENSDARG00000076745 72 1.648 - - 0.926 - - - 0.722 - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
59. raf1b ENSDARG00000059406 301 1.641 - - - 0.881 - - - - 0.760 Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
60. pms1 ENSDARG00000000476 105 1.639 - - - - - - - 0.799 0.840 PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]
61. si:dkey-3b8.4 si:dkey-3b8.4 13 1.635 0.774 - 0.861 - - - - - -
62. GJC1 GJC1 44 1.632 - - - - - - 0.779 - 0.853
63. lrrc9 ENSDARG00000054352 25 1.63 - - - - - - 0.705 - 0.925 leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
64. CYP46A1 CYP46A1 16 1.626 0.774 - - - - - - - 0.852
65. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.62 0.729 - - - - - - 0.891 - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
66. spag1a ENSDARG00000004017 1140 1.616 - - - 0.783 - - - 0.833 - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
67. tysnd1 ENSDARG00000074895 85 1.614 - 0.761 - - - - - 0.853 - trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
68. SMARCAD1 SMARCAD1 104 1.609 - - - - - - 0.896 - 0.713
69. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.608 - - - - 0.772 - 0.836 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
70. tcf3a ENSDARG00000005915 12 1.607 0.774 0.833 - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
71. klhl42 ENSDARG00000006011 46 1.604 0.774 - - - - - - 0.830 - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
72. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.602 - 0.823 - - - - 0.779 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
73. dennd2c ENSDARG00000073738 161 1.599 - 0.876 - - - - - 0.723 - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
74. arhgap17b ENSDARG00000062263 55 1.576 - 0.768 - - - - - - 0.808 Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
75. si:ch211-229n2.7 ENSDARG00000094088 410 1.567 - - - 0.778 - - - - 0.789 si:ch211-229n2.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8579]
76. C5H4orf22 C5H4orf22 117 1.555 - - 0.792 - - - - 0.763 -
77. ENTHD1 ENTHD1 235 1.514 - 0.777 - - - - 0.737 - -
78. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.512 - - - 0.811 - - - - 0.701 ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
79. cx39.9 ENSDARG00000004082 148 1.509 - 0.718 - - - - - - 0.791 connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
80. btbd3b ENSDARG00000087517 107 1.497 - - 0.741 - - - 0.756 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
81. tmlhe ENSDARG00000077547 301 1.48 0.758 - - - - - 0.722 - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
82. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.479 0.774 0.705 - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
83. tpgs2 ENSDARG00000011926 48 1.465 0.736 0.729 - - - - - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
84. wdr32 ENSDARG00000029600, ENSDARG00000110405 607 1.441 - 0.737 - - - - 0.704 - - WD repeat domain 32 [Source:ZFIN;Acc:ZDB-GENE-040426-2314]
85. crabp1b ENSDARG00000035904 2753 1.429 - - - 0.719 - - - 0.710 - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
86. CR407704.1 CR407704.1 188 1.422 - - - - 0.709 - 0.713 - -
87. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
88. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - 1.000 - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
89. ENDOD1 ENDOD1 1 1 - - - - - - 1.000 - -
90. BX005294.2 ENSDARG00000109361 3 1 - - - - - - 1.000 - -
91. chia.4 ENSDARG00000008541 14 1 - - - - - - 1.000 - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
92. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
93. ftr43 ENSDARG00000076106 2 1 - - - - - - 1.000 - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
94. pcdh2g8 2 1 - - - - - - 1.000 - - protocadherin 2 gamma 8
95. CU481774.2 CU481774.2 1 1 - - - - - - 1.000 - -
96. mfsd2b ENSDARG00000030263 12 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
97. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - - - - - 1.000 - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
98. zgc:174224 ENSDARG00000093875 4 1 - - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
99. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
100. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]

There are 1570 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA