Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc4.2

Gene Name Gene ID Reads Annotation
lrrc4.2 ENSDARG00000003020 235 leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]










Genes with expression patterns similar to lrrc4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc4.2 ENSDARG00000003020 235 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
2. FAM163A ENSDARG00000093021 86 3.461 0.988 0.859 - - - 0.870 0.744 - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
3. BX957337.1 BX957337.1 1685 3.411 - 0.832 - - - 0.850 0.757 0.972 -
4. nrcam nrcam 397 3.212 - 0.908 - - 0.783 0.807 0.714 - -
5. stmn2b ENSDARG00000070537 1586 3.022 - 0.712 - - 0.754 0.843 0.713 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
6. bsk146 ENSDARG00000099069 274 2.81 - 0.908 - - - 0.906 - 0.996 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
7. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.707 - 0.888 - - - 0.846 - 0.973 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
8. TDG TDG 1191 2.561 - - - - 0.802 0.772 - 0.987 -
9. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.473 - 0.737 - - - 0.882 - 0.854 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
10. slc17a6b ENSDARG00000041150 823 2.442 - - - - - 0.886 0.729 0.827 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
11. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.433 - 0.812 - - 0.855 0.766 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
12. rims2b ENSDARG00000102690 275 2.327 - 0.786 - - - 0.821 0.720 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
13. CLIP3 ENSDARG00000054456 734 2.251 - 0.766 - - - 0.775 0.710 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
14. SNORD38 SNORD38 171 1.979 1.000 - - - - - - 0.979 -
15. anapc5 ENSDARG00000008461 434 1.959 0.962 - - - - - - 0.997 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
16. ZNF648 ENSDARG00000104823 194 1.908 1.000 0.908 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
17. TULP2 TULP2 38 1.908 1.000 0.908 - - - - - - -
18. XKR7 ENSDARG00000026333 175 1.907 - 0.908 - - - - - 0.999 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
19. fstl5 ENSDARG00000040198 213 1.902 - 0.908 - - - - - 0.994 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
20. RFFL_1 RFFL_1 157 1.898 0.949 0.949 - - - - - - -
21. grnas ENSDARG00000091885 71 1.875 0.926 0.949 - - - - - - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
22. SYTL1 ENSDARG00000070094 282 1.873 1.000 - - - 0.873 - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
23. ap4b1 ENSDARG00000013726 382 1.826 0.971 - - - 0.855 - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
24. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.821 - - - - - 0.837 - 0.984 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
25. gphnb ENSDARG00000100851 118 1.818 - 0.908 - - 0.910 - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
26. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.799 - - - - - 0.801 - 0.998 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
27. PARP6 PARP6 119 1.795 - 0.908 - - - - 0.887 - -
28. syt9a ENSDARG00000003994 298 1.788 - 0.908 - - - 0.880 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
29. DVL3 1098 1.783 - - - - - 0.788 - 0.995 - dishevelled segment polarity protein 3
30. nadl1.1 1200 1.773 - - - - - 0.820 - 0.953 - neural adhesion molecule L1.1, transcript variant X1
31. slc1a2b ENSDARG00000102453 3136 1.773 - - - - - 0.825 - 0.948 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
32. xkr6 xkr6 286 1.767 - - - - - 0.769 - 0.998 -
33. tnika ENSDARG00000056218 728 1.763 - - - - - 0.772 - 0.991 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
34. CPNE8_1 CPNE8_1 140 1.761 - 0.897 - - 0.864 - - - -
35. cadm3 ENSDARG00000057013 1545 1.757 - - - - - 0.820 - 0.937 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
36. si:ch211-194k22.8 ENSDARG00000096711 1318 1.753 - - - - - 0.786 - 0.967 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
37. Mar-09 Mar-09 126 1.75 - 0.908 - - 0.842 - - - -
38. ppp2r2ba 321 1.75 - - - - - 0.810 0.940 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
39. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.747 - - - - - 0.750 - 0.997 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
40. mapre3a ENSDARG00000020231 100 1.745 - 0.949 - - - - 0.796 - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
41. napg napg 645 1.745 - - - - - 0.765 - 0.980 -
42. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1.743 - 0.908 - - - - 0.835 - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
43. PRRT2 ENSDARG00000103588 913 1.743 - - - - - 0.750 - 0.993 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
44. slc6a1b ENSDARG00000039647 1301 1.742 - - - - - 0.830 - 0.912 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
45. AP3B2 1874 1.739 - - - - - 0.769 - 0.970 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
46. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.737 - 0.908 - - - 0.829 - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
47. gltscr1l gltscr1l 782 1.736 - - - - - 0.758 - 0.978 -
48. CABZ01038313.1 CABZ01038313.1 79 1.734 - 0.908 - - - 0.826 - - -
49. si:dkey-253a1.2 si:dkey-253a1.2 52 1.732 - - - - 0.925 - 0.807 - -
50. scn1lab ENSDARG00000062744 155 1.732 - 0.949 - - - 0.783 - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
51. slc12a5b ENSDARG00000078187 329 1.731 - 0.908 - - 0.823 - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
52. SB:CB827 SB:CB827 245 1.725 - - - - - 0.727 - 0.998 -
53. faim2a ENSDARG00000038784 39 1.723 0.815 0.908 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
54. npffr1l2 ENSDARG00000062631 127 1.723 - - - - - 0.770 0.953 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
55. atp1b4 ENSDARG00000053262 1337 1.721 - 0.889 - - - 0.832 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
56. sox8 sox8 109 1.721 - 0.908 - - - - 0.813 - -
57. mhc1zea ENSDARG00000001470 184 1.704 0.819 - - - 0.885 - - - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
58. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.7 - 0.858 - - - 0.842 - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
59. phc2b_1 ENSDARG00000013224 1316 1.697 - - - - - 0.751 - 0.946 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
60. gipc1 ENSDARG00000104483 2913 1.693 - - - - - 0.721 - 0.972 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
61. thsd7ba ENSDARG00000095022 231 1.693 - 0.841 - - - 0.852 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
62. pcif1 ENSDARG00000099084 2851 1.69 - - - - - 0.727 - 0.963 - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
63. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.688 - 0.908 - - - - 0.780 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
64. CDCA4 ENSDARG00000042319 7918 1.682 - - - - - 0.774 - 0.908 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
65. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.677 - - - - - 0.881 - 0.796 - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
66. Sep-03 Sep-03 1124 1.677 - - - - - 0.862 - 0.815 -
67. sox19b ENSDARG00000040266 532 1.676 - 0.726 - - - - - 0.950 - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
68. tet2 ENSDARG00000076928 2190 1.675 - - - - - 0.800 - 0.875 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
69. MON2 ENSDARG00000099798 2359 1.675 - - - - - 0.750 - 0.925 - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
70. atp2b3b ENSDARG00000023445 1424 1.671 - 0.754 - - - 0.917 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
71. hmgb3a ENSDARG00000056725 15668 1.666 - - - - - 0.774 - 0.892 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
72. atat1 ENSDARG00000004472 700 1.666 - 0.908 - - - 0.758 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
73. hes2.2 ENSDARG00000068168 197 1.664 - 0.908 - - - - 0.756 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
74. caly ENSDARG00000036008 1002 1.663 - - - - 0.810 0.853 - - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
75. FAM161A ENSDARG00000089742 41 1.663 - 0.949 - - - - 0.714 - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]
76. phf20a ENSDARG00000002750 90 1.663 - 0.949 - - - - 0.714 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
77. CABZ01065506.1 CABZ01065506.1 204 1.661 - 0.908 - - - 0.753 - - -
78. cacnb4b ENSDARG00000062174 159 1.658 - 0.812 - - - 0.846 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
79. APEH ENSDARG00000008703 73 1.657 - 0.949 - - - - 0.708 - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
80. KCNIP4 ENSDARG00000088100 86 1.655 - 0.908 - - - 0.747 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
81. si:ch73-362m14.4 ENSDARG00000023940 88 1.654 - - - - - 0.779 0.875 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
82. cthrc1b ENSDARG00000001971 44 1.649 - 0.908 0.741 - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
83. CU184872.1 CU184872.1 15 1.645 - - - - 0.931 - 0.714 - -
84. tor3a ENSDARG00000079308 142 1.641 - 0.788 - - 0.853 - - - - torsin family 3, member A [Source:ZFIN;Acc:ZDB-GENE-081104-165]
85. dpysl5a ENSDARG00000011141 1827 1.639 - 0.733 - - - 0.906 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
86. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.639 - 0.820 - - - 0.819 - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
87. cacna1c ENSDARG00000008398 193 1.629 - - - - - 0.820 0.809 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
88. pyya ENSDARG00000053449 134 1.625 - - - - - 0.880 0.745 - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
89. zgc:174697 zgc:174697 128 1.624 - 0.908 - - - 0.716 - - -
90. lzts1 ENSDARG00000075565 23 1.622 - 0.908 - - - - 0.714 - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
91. pag1 ENSDARG00000055875 21 1.622 - 0.908 - - - - 0.714 - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
92. SSBP2 ENSDARG00000099727 22 1.622 - 0.908 - - - - 0.714 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
93. mir92b 95 1.622 - 0.908 - - - - 0.714 - - microRNA 92b
94. PPFIA3 ENSDARG00000077053 310 1.622 - 0.908 - - - 0.714 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
95. ccdc64 ccdc64 2 1.622 - 0.908 - - - - 0.714 - -
96. DNAJC14 ENSDARG00000105398 20 1.622 - 0.908 - - - - 0.714 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
97. TENM2 ENSDARG00000037122 48 1.622 - 0.908 - - - - 0.714 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
98. SACS ENSDARG00000091042 15 1.622 - 0.908 - - - - 0.714 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
99. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.622 - 0.908 - - - - 0.714 - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
100. BTBD17 BTBD17 53 1.622 - 0.908 - - - - 0.714 - -

There are 2096 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA