Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrrc4.1

Gene Name Gene ID Reads Annotation
lrrc4.1 ENSDARG00000069402 323 leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]










Genes with expression patterns similar to lrrc4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc4.1 ENSDARG00000069402 323 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
2. slc32a1 ENSDARG00000059775 1092 3.633 0.736 0.986 - - - 0.970 0.941 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
3. nell2b ENSDARG00000062797 854 3.56 0.872 0.891 - - - 0.825 0.972 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
4. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.45 - 0.989 0.716 - - 0.926 0.819 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
5. bsk146 ENSDARG00000099069 274 3.409 0.950 0.704 - - - 0.790 0.965 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
6. mapk12b ENSDARG00000006409 2246 3.399 0.770 0.825 - - - 0.849 0.955 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
7. rbfox3 rbfox3 1443 3.346 0.710 0.790 - - - 0.901 0.945 - -
8. fbxo41 ENSDARG00000078908 95 3.267 0.899 0.704 - - - 0.720 0.944 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
9. nes ENSDARG00000088805 2710 3.206 0.751 0.784 - - - 0.749 0.922 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
10. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 3.116 0.728 0.704 - - - 0.764 0.920 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
11. zgc:194665 ENSDARG00000004577 136 3.071 - 0.704 - - - 0.754 0.874 0.739 - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
12. cacng8b ENSDARG00000070626 176 2.809 0.970 - - - - 0.886 0.953 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
13. adam23a ENSDARG00000062323 580 2.788 - 0.948 - - - 0.972 0.868 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
14. SNAP91 ENSDARG00000098809 556 2.785 - 0.851 - - - 0.978 0.956 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
15. snap25a ENSDARG00000020609 4537 2.785 - 0.853 - - - 0.971 0.961 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
16. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.766 0.938 - - - - 0.933 0.895 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
17. dpysl5a ENSDARG00000011141 1827 2.757 - 0.884 - - - 0.910 0.963 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
18. vsnl1a ENSDARG00000023228 1584 2.757 - 0.944 - - - 0.932 0.881 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
19. stx1b ENSDARG00000000503 2724 2.754 - 0.852 - - - 0.931 0.971 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
20. pcsk1nl ENSDARG00000076170 1232 2.753 - 0.881 - - - 0.904 0.968 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
21. lhx1a ENSDARG00000014018 958 2.741 0.847 - - - - 0.921 0.973 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
22. TUSC5 TUSC5 1436 2.74 - 0.871 - - - 0.944 0.925 - -
23. sall3b ENSDARG00000057586 982 2.739 - 0.859 - - - 0.902 0.978 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
24. scn8aa ENSDARG00000005775 792 2.717 - 0.863 - - - 0.931 0.923 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
25. atp2b3b ENSDARG00000023445 1424 2.702 - 0.913 - - - 0.917 0.872 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
26. SV2B SV2B 208 2.7 - 0.846 - - - 0.914 0.940 - -
27. TUBB8P7_1 TUBB8P7_1 2722 2.699 - 0.772 - - - 0.974 0.953 - -
28. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.69 0.779 - - - - 0.955 0.956 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
29. cers6 ENSDARG00000053583 247 2.688 - 0.786 - - - 0.930 0.972 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
30. sez6l2 ENSDARG00000076052 360 2.685 0.804 - - - - 0.933 0.948 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
31. amph ENSDARG00000007663 599 2.68 - 0.846 - - - 0.890 0.944 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
32. GJD2 GJD2 1351 2.662 0.866 0.835 - - - - 0.961 - -
33. syt11a ENSDARG00000057913 1145 2.653 - 0.854 - - - 0.869 0.930 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
34. stmn2a ENSDARG00000033234 2272 2.653 - 0.814 - - - 0.892 0.947 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
35. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.648 - 0.704 - - - 0.967 0.977 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
36. st18 663 2.647 - 0.827 - - - 0.899 0.921 - - suppression of tumorigenicity 18, zinc finger
37. nova2 ENSDARG00000017673 7685 2.643 - 0.843 - - - 0.862 0.938 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
38. MAP6 MAP6 643 2.64 0.812 0.864 - - - - 0.964 - -
39. hmp19 2554 2.639 0.848 - - - - 0.853 0.938 - - HMP19 protein
40. MAP1A MAP1A 847 2.639 - 0.751 - - - 0.925 0.963 - -
41. gap43 ENSDARG00000099744 4114 2.634 - 0.808 - - - 0.894 0.932 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
42. zic4 ENSDARG00000031307 1228 2.623 - 0.829 - - - 0.905 0.889 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
43. her4.1 ENSDARG00000056732 1264 2.619 0.833 - - - - 0.942 0.844 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
44. cadpsb ENSDARG00000070567 458 2.619 - 0.946 - - - 0.733 0.940 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
45. itm2ca ENSDARG00000043448 1265 2.617 - 0.749 - - - 0.891 0.977 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
46. si:ch73-21g5.7 ENSDARG00000093156 9412 2.616 - 0.851 - - - 0.806 0.959 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
47. scn2b ENSDARG00000101713 796 2.614 - 0.846 - - - 0.798 0.970 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
48. nrarpb ENSDARG00000018958 6225 2.606 0.795 - - - - 0.857 0.954 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
49. scrt2 ENSDARG00000056175 4331 2.601 - 0.737 - - - 0.942 0.922 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
50. nadl1.1 1200 2.599 - 0.776 - - - 0.860 0.963 - - neural adhesion molecule L1.1, transcript variant X1
51. stmn2b ENSDARG00000070537 1586 2.593 - 0.813 - - - 0.936 0.844 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
52. gng3 ENSDARG00000009553 2530 2.591 - 0.828 - - - 0.786 0.977 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
53. stxbp1a ENSDARG00000001994 5154 2.588 - 0.707 - - - 0.921 0.960 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
54. FAM171A2 FAM171A2 707 2.582 0.777 0.827 - - - - 0.978 - -
55. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.576 0.931 - - - - 0.755 0.890 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
56. cnrip1a ENSDARG00000091683 1491 2.573 - 0.812 - - - 0.810 0.951 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
57. nmnat2 ENSDARG00000004580 370 2.573 - 0.831 - - - 0.902 0.840 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
58. jag1a ENSDARG00000030289 1275 2.57 - 0.921 - - - 0.753 0.896 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
59. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.57 0.742 - - - - 0.863 0.965 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
60. SKOR2 SKOR2 1041 2.569 - 0.755 - - - 0.887 0.927 - -
61. grin1a ENSDARG00000027828 1327 2.565 0.785 - - - - 0.854 0.926 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
62. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.563 - 0.786 - - - 0.827 0.950 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
63. STMN3 ENSDARG00000038465 1009 2.56 0.791 - - - - 0.807 0.962 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
64. dpysl3 ENSDARG00000002587 4381 2.559 0.710 - - - - 0.883 0.966 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
65. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.554 - 0.785 - - - 0.807 0.962 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
66. myt1b ENSDARG00000102879 5411 2.553 - 0.741 - - - 0.880 0.932 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
67. nhlh2 ENSDARG00000025495 1860 2.551 0.900 - - - - 0.729 0.922 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
68. RBPMS ENSDARG00000099396 61 2.544 0.799 1.000 - - - - 0.745 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
69. thsd7ba ENSDARG00000095022 231 2.53 - 0.804 - - - 0.828 0.898 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
70. KCNIP4 ENSDARG00000088100 86 2.529 0.893 0.704 - - - - 0.932 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
71. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.525 - 0.889 - - - 0.727 0.909 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
72. rtn1b ENSDARG00000021143 1682 2.52 - 0.743 - - - 0.932 0.845 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
73. dtnbp1b ENSDARG00000055206 64 2.508 0.829 - - - - 0.770 0.909 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
74. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.505 0.849 - - - - 0.803 0.853 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
75. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.499 0.784 0.750 - - - - 0.965 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
76. plp1a ENSDARG00000103732 3544 2.499 0.734 - - - - 0.829 0.936 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
77. nptx1l ENSDARG00000074671 569 2.499 - 0.757 - - - 0.895 0.847 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
78. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.495 - 0.724 - - - 0.844 0.927 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
79. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.495 - 0.704 - - - 0.843 0.948 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
80. irx5b ENSDARG00000074070 459 2.49 0.762 - - - - 0.871 0.857 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
81. atp1b4 ENSDARG00000053262 1337 2.484 - 0.801 - - - 0.867 0.816 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
82. CHL1 CHL1 1553 2.481 - 0.851 - - - 0.771 0.859 - -
83. thsd7a thsd7a 194 2.47 - 0.787 - - - 0.720 0.963 - -
84. scn1lab ENSDARG00000062744 155 2.469 0.815 - - - - 0.719 0.935 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
85. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.464 - 0.744 - - - 0.902 0.818 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
86. tox ENSDARG00000032317 9126 2.456 0.749 - - - - 0.782 0.925 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
87. prdm12b ENSDARG00000007430 914 2.452 0.741 - - - - 0.761 0.950 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
88. rab39b rab39b 449 2.452 - 0.712 - - - 0.824 0.916 - -
89. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.444 - 0.800 - - - 0.745 0.899 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
90. gphnb ENSDARG00000100851 118 2.436 0.853 0.704 - - - - 0.879 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
91. CABZ01029738.1 CABZ01029738.1 327 2.434 0.767 0.759 - - - - 0.908 - -
92. slc12a5b ENSDARG00000078187 329 2.433 - 0.704 - - - 0.809 0.920 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
93. syngr3a ENSDARG00000014871 405 2.43 0.763 - - - - 0.777 0.890 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
94. CT030046.1 CT030046.1 190 2.426 0.755 - - - - 0.787 0.884 - -
95. negr1 ENSDARG00000021607 1051 2.423 0.714 - - - - 0.848 0.861 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
96. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 2.419 0.847 - - - - 0.787 0.785 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
97. si:ch211-278j3.3 ENSDARG00000020284 478 2.416 0.721 - - - - 0.810 0.885 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
98. AP3B2 1874 2.409 - 0.813 - - - 0.847 0.749 - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
99. si:ch211-152f6.6 si:ch211-152f6.6 278 2.408 - 0.885 - - - 0.714 0.809 - -
100. eml1 ENSDARG00000042840 569 2.401 - 0.825 - - - 0.777 0.799 - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]

There are 2020 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA