Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrrc39

Gene Name Gene ID Reads Annotation
lrrc39 ENSDARG00000071465, ENSDARG00000116738 349 leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]










Genes with expression patterns similar to lrrc39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc39 ENSDARG00000071465, ENSDARG00000116738 349 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]
2. si:ch73-167f18.3 si:ch73-167f18.3 78 1.632 - 0.726 - - - - - 0.906 -
3. CABZ01003826.1 CABZ01003826.1 486 1.631 - 0.778 - - - - - 0.853 -
4. ctu2 ENSDARG00000051851 68 1.618 0.821 - - - - 0.797 - - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
5. COX19 ENSDARG00000063882 419 1.548 - - - - - 0.825 - 0.723 - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
6. col19a1 ENSDARG00000076163, ENSDARG00000096073 356 1.542 0.722 0.820 - - - - - - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
7. chchd3 chchd3 4139 1.478 - - - - - - 0.711 0.767 -
8. hspb6 ENSDARG00000077236 209 1.453 - 0.730 - - - - 0.723 - - heat shock protein, alpha-crystallin-related, b6 [Source:ZFIN;Acc:ZDB-GENE-080214-7]
9. pno1 ENSDARG00000008502 4547 1.452 - - - - - - 0.742 0.710 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
10. trdn ENSDARG00000041779 4283 1.45 - - - - - - 0.723 0.727 - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
11. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.433 - 0.725 - - - - 0.708 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
12. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.936 - - - - - - - 0.936 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
13. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.912 - - - - - - - 0.912 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
14. GDPD4_1 GDPD4_1 190 0.911 - - - - - - - 0.911 -
15. prkag3b ENSDARG00000000369 1945 0.91 - - - - - - - 0.910 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
16. slc25a23a ENSDARG00000005690 824 0.91 - - - - - - - 0.910 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
17. ly75 ENSDARG00000053113 196 0.91 - - - - - - - 0.910 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
18. timm10 ENSDARG00000069116 4459 0.909 - - - - - - - 0.909 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
19. KBTBD13_1 KBTBD13_1 116 0.908 - - - - - - - 0.908 -
20. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.907 - - - - - - - 0.907 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
21. adcyap1a ENSDARG00000004015 67 0.907 - - - - - - - 0.907 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
22. VDAC3 ENSDARG00000003695 34 0.906 - - - - - - - 0.906 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
23. pde6b ENSDARG00000011671 44 0.906 - - - - - - - 0.906 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
24. ALPK1 195 0.906 - - - - - - - 0.906 - alpha-kinase 1
25. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.906 - - - - - - - 0.906 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
26. CIT CIT 212 0.906 - - - - - - - 0.906 -
27. si:dkey-100h21.2 si:dkey-100h21.2 30 0.906 - - - - - - - 0.906 -
28. setx ENSDARG00000022996 385 0.906 - - - - - - - 0.906 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
29. IKZF4 ENSDARG00000037068 36 0.906 - - - - - - - 0.906 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
30. jam3a ENSDARG00000114589 630 0.905 - - - - - - - 0.905 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
31. pard3 pard3 161 0.905 - - - - - - - 0.905 -
32. mir130b 180 0.905 - - - - - - - 0.905 - microRNA 130b
33. TTF1_4 TTF1_4 504 0.905 - - - - - - - 0.905 -
34. camk2d1 ENSDARG00000043010 669 0.904 - - - - - - - 0.904 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
35. spef2 ENSDARG00000098330 59 0.904 - - - - - - - 0.904 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
36. ankdd1b ENSDARG00000025866 51 0.904 - - - - - - - 0.904 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
37. MAP7 MAP7 98 0.904 - - - - - - - 0.904 -
38. si:dkey-157e10.7 si:dkey-157e10.7 105 0.903 - - - - - - - 0.903 -
39. mea1 ENSDARG00000039820 589 0.903 - - - - - - - 0.903 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
40. tarsl2 ENSDARG00000092774 505 0.903 - - - - - - - 0.903 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
41. DOCK10 ENSDARG00000075327 150 0.902 - - - - - 0.902 - - - dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
42. rpgra ENSDARG00000056617 77 0.902 - - - - - - - 0.902 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
43. reep1 ENSDARG00000014854 915 0.902 - - - - - - - 0.902 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
44. hoxa4a 37 0.902 - - - - - - - 0.902 - homeobox A4a, transcript variant X4
45. fgf12a ENSDARG00000027957 143 0.9 - - - - - - - 0.900 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
46. si:dkey-17e6.2 si:dkey-17e6.2 72 0.899 - - - - - - - 0.899 -
47. nrxn2b ENSDARG00000063150 343 0.899 - - - - - - - 0.899 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
48. HYKK HYKK 261 0.899 - - - - - - - 0.899 -
49. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.898 - - - - - - - 0.898 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
50. commd1 ENSDARG00000031203 340 0.898 - - - - - - - 0.898 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
51. BX511021.1 ENSDARG00000073936 647 0.897 - - - - - - - 0.897 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
52. pus7 ENSDARG00000031774 195 0.897 - - - - - - - 0.897 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
53. BX005410.2 BX005410.2 44 0.896 - - - - - - - 0.896 -
54. nrg2a ENSDARG00000077818 854 0.895 - - - - - - - 0.895 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
55. zgc:174688 zgc:174688 170 0.895 - - - - - - - 0.895 -
56. adora1 adora1 149 0.895 - - - - - - - 0.895 -
57. BX649282.1 ENSDARG00000105704 347 0.894 - - - - - - - 0.894 -
58. trib2 ENSDARG00000068179 616 0.893 - - - - - - 0.893 - - tribbles pseudokinase 2 [Source:ZFIN;Acc:ZDB-GENE-091207-3]
59. hn1a hn1a 115 0.893 - - - - - - - 0.893 -
60. si:dkey-253d23.2 ENSDARG00000071589 143 0.892 - - - - - - - 0.892 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
61. CABZ01045230.1 CABZ01045230.1 158 0.892 - - - - - - - 0.892 -
62. rwdd2b ENSDARG00000055426 294 0.891 - - - - - - - 0.891 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
63. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.891 - - - - - - - 0.891 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
64. slc6a6a ENSDARG00000012534 183 0.891 - - - - - - - 0.891 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
65. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.89 - - - - - - - 0.890 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
66. zgc:110843 ENSDARG00000073845 940 0.89 - - - - - - - 0.890 - zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
67. usp4 ENSDARG00000014770 1684 0.89 - - - - - - - 0.890 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
68. aatkb ENSDARG00000104442 392 0.889 - - - - - - - 0.889 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
69. SHANK1 ENSDARG00000060539 102 0.888 - - - - - - - 0.888 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
70. CAPN5 CAPN5 357 0.887 - - - - - - - 0.887 -
71. b3galtla b3galtla 111 0.887 - - - - - - - 0.887 -
72. smarcd2 ENSDARG00000088877 416 0.887 - - - - - - - 0.887 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
73. ncoa6 ENSDARG00000071272 759 0.886 - - - - - - - 0.886 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
74. per3 ENSDARG00000010519 331 0.885 - - - - - - - 0.885 - period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
75. si:dkey-8k3.2 ENSDARG00000038424 285 0.884 - - - - - - - 0.884 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
76. enosf1 ENSDARG00000038359 209 0.884 - - - - - - - 0.884 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
77. TCAIM ENSDARG00000079881 424 0.884 - - - - - - - 0.884 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
78. bola1 ENSDARG00000039915 658 0.883 - - - - - - - 0.883 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
79. zgc:174877 ENSDARG00000079278 143 0.882 - - - - - - - 0.882 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
80. si:dkey-169l5.3 si:dkey-169l5.3 239 0.882 - - - - - - - 0.882 -
81. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.88 - - - - - - - 0.880 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
82. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.879 - - - - - - - 0.879 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
83. p2rx3b ENSDARG00000029718 105 0.879 - - - - - - - 0.879 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
84. EPS8L2 ENSDARG00000058108 484 0.879 - - - - - - - 0.879 - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
85. gcdh gcdh 1390 0.879 - - - - - - - 0.879 -
86. tmie ENSDARG00000069423 305 0.878 - - - - - - - 0.878 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
87. ANGPT4 ENSDARG00000076787 140 0.877 - - - - - - - 0.877 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
88. nrp2b ENSDARG00000038446 783 0.877 - - - - - - - 0.877 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
89. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.875 - - - - - - - 0.875 - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
90. RBM12B ENSDARG00000079717 541 0.875 - - - - - - - 0.875 - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
91. git2a ENSDARG00000061915 884 0.874 - - - - - - - 0.874 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
92. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.874 - - - - - - - 0.874 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
93. smtnl1 ENSDARG00000041257 7410 0.873 - - - - - - - 0.873 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
94. CR381544.1 ENSDARG00000088187 821 0.871 - - - - - - - 0.871 -
95. CR790363.1 ENSDARG00000097364 145 0.871 - - - - - - - 0.871 -
96. si:ch73-73d17.3 si:ch73-73d17.3 925 0.871 - - - - - - - 0.871 -
97. ponzr1 ENSDARG00000090444 540 0.87 - - - - - - - 0.870 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
98. zgc:122979 ENSDARG00000004187 61 0.87 - - - - - - - 0.870 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
99. clybl ENSDARG00000029729 690 0.869 - - - - - - - 0.869 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
100. CABZ01080599.2 CABZ01080599.2 192 0.869 - - - - - - - 0.869 -

There are 562 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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