Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc28

Gene Name Gene ID Reads Annotation
lrrc28 ENSDARG00000057477 444 leucine rich repeat containing 28 [Source:ZFIN;Acc:ZDB-GENE-061128-1]










Genes with expression patterns similar to lrrc28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc28 ENSDARG00000057477 444 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 28 [Source:ZFIN;Acc:ZDB-GENE-061128-1]
2. rasl10a ENSDARG00000062314 207 2.373 0.724 0.856 - - - 0.793 - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
3. C5H9orf117 C5H9orf117 88 2.269 - 0.771 0.766 0.732 - - - - -
4. Mar-01 Mar-01 176 1.829 - - - - 0.913 0.916 - - -
5. stk25a ENSDARG00000002210 372 1.818 - 0.920 - - - 0.898 - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
6. gpr98 gpr98 717 1.768 - 0.868 - - 0.900 - - - -
7. rybpa ENSDARG00000037773 904 1.72 - 0.815 - - 0.905 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
8. arsg ENSDARG00000101715 57 1.719 - 0.874 - - - 0.845 - - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
9. pdcd2l ENSDARG00000002754 417 1.697 - - - 0.790 0.907 - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
10. wdfy2 ENSDARG00000040453 406 1.677 - - 0.751 - - 0.926 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
11. C1H3orf70 C1H3orf70 634 1.672 - 0.764 - - 0.908 - - - -
12. nthl1 ENSDARG00000042881 252 1.661 - 0.805 - - - 0.856 - - - nth-like DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-120511-4]
13. cep104 ENSDARG00000060361 303 1.659 - - - - - 0.902 0.757 - - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
14. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.651 - 0.848 - - - 0.803 - - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
15. thap7 ENSDARG00000070704 225 1.636 - 0.808 - - - 0.828 - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
16. st6galnac5b ENSDARG00000057433, ENSDARG00000110829 248 1.615 - 0.793 - - - 0.822 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-25]
17. pex1 ENSDARG00000098904 168 1.615 - - - - - 0.897 - - 0.718 peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
18. csdc2b 82 1.585 0.764 0.821 - - - - - - - cold shock domain containing C2, RNA binding b
19. gtf3c5 ENSDARG00000067979 702 1.572 0.708 - - - - 0.864 - - - general transcription factor IIIC, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-060810-66]
20. armc1l ENSDARG00000020887 1219 1.566 - 0.737 - - - 0.829 - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
21. C9H21orf33 C9H21orf33 321 1.53 - - - - - 0.769 0.761 - -
22. sh2d5 ENSDARG00000014324 228 1.516 - 0.751 - - - 0.765 - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
23. CU683898.1 CU683898.1 203 1.514 - 0.800 - 0.714 - - - - -
24. slc25a39 ENSDARG00000007449 630 1.44 - 0.734 - - - 0.706 - - - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
25. map4k3a ENSDARG00000087742 771 1.415 - 0.714 - - - 0.701 - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
26. coil ENSDARG00000040070 863 0.992 - - - - 0.992 - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
27. slc1a2b ENSDARG00000102453 3136 0.974 - - - - 0.974 - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
28. ep300b ENSDARG00000061108 5173 0.974 - - - - 0.974 - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
29. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 0.973 - - - - 0.973 - - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
30. pmela ENSDARG00000091298 5179 0.963 - - - - 0.963 - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
31. ube3d ENSDARG00000026178 244 0.945 - - - - - 0.945 - - - ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
32. ZDHHC5 ZDHHC5 836 0.94 - - - - - 0.940 - - -
33. pcdh10a ENSDARG00000099729 2214 0.939 - - - - 0.939 - - - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
34. zfand5b ENSDARG00000002271 4145 0.936 - - - - 0.936 - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
35. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.934 - - - - - 0.934 - - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
36. mycla ENSDARG00000006003 1866 0.934 - 0.934 - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
37. src ENSDARG00000008107 3643 0.934 - - - - 0.934 - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
38. gdap1 ENSDARG00000058601 89 0.933 - - - - - 0.933 - - - ganglioside induced differentiation associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-424]
39. BICD2 ENSDARG00000075571 401 0.933 - - - - - 0.933 - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
40. kcnk13a ENSDARG00000008212 136 0.932 - - - - - 0.932 - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
41. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 0.931 - 0.931 - - - - - - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
42. wu:fb11h05 wu:fb11h05 126 0.93 - - - - - 0.930 - - -
43. sp4 ENSDARG00000005186 2904 0.929 - - - - 0.929 - - - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
44. znf653 ENSDARG00000093469 149 0.927 - 0.927 - - - - - - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
45. si:dkey-95p16.2 ENSDARG00000093484 3413 0.927 - - - - 0.927 - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
46. nt5dc2 ENSDARG00000059646 3878 0.927 - - - - 0.927 - - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
47. C16H8orf76 C16H8orf76 329 0.927 - - - - - 0.927 - - -
48. C20H12orf57 C20H12orf57 3325 0.926 - - - - 0.926 - - - -
49. CABZ01050100.1 CABZ01050100.1 17 0.925 - - - - - 0.925 - - -
50. CU570781.1 ENSDARG00000094656 49 0.925 - - - - - 0.925 - - -
51. fbxo32 ENSDARG00000040277 93 0.924 - 0.924 - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
52. nop16 ENSDARG00000044402 3645 0.924 - - - - 0.924 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
53. si:dkey-18j14.4 si:dkey-18j14.4 60 0.924 - - - - - 0.924 - - -
54. ralgps1 ENSDARG00000068370 39 0.924 - - - - - 0.924 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
55. znf668 ENSDARG00000025226, ENSDARG00000112533 177 0.924 - - - - - 0.924 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
56. dph7 ENSDARG00000062083 248 0.923 - - - - - 0.923 - - - diphthamide biosynthesis 7 [Source:ZFIN;Acc:ZDB-GENE-070410-57]
57. si:ch211-103e16.4 si:ch211-103e16.4 227 0.922 - - - - - 0.922 - - -
58. itprip ENSDARG00000015576 62 0.922 - - - - - 0.922 - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
59. CABZ01044346.1 CABZ01044346.1 12 0.922 - - - - - 0.922 - - -
60. myo7bb ENSDARG00000077201 7 0.922 - - - - - 0.922 - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
61. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.922 - - - - - 0.922 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
62. slc16a8 ENSDARG00000045153 478 0.92 - 0.920 - - - - - - - solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
63. cry2b cry2b 517 0.92 - - - - - 0.920 - - -
64. mfsd12a ENSDARG00000061908 68 0.92 - - - - - 0.920 - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
65. syt14b ENSDARG00000001891 85 0.919 - - - - - 0.919 - - - synaptotagmin XIVb [Source:ZFIN;Acc:ZDB-GENE-041014-36]
66. b3gntl1 ENSDARG00000043431 50 0.919 - - - - - 0.919 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
67. polr3a ENSDARG00000102569 1072 0.918 - - - - - 0.918 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
68. ugt2b6 ugt2b6 111 0.916 - 0.916 - - - - - - -
69. utp18 ENSDARG00000102618 1983 0.916 - - - - - 0.916 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
70. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.915 - - - - - 0.915 - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
71. si:dkey-178o8.2 si:dkey-178o8.2 15 0.915 - - - - - 0.915 - - -
72. si:dkey-30j22.1 ENSDARG00000042829 25 0.915 - - - - - 0.915 - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
73. st6galnac1.1 ENSDARG00000043814 95 0.915 - - - - - 0.915 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
74. FP017194.1 FP017194.1 52 0.915 - - - - - 0.915 - - -
75. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 0.914 - - - - - 0.914 - - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
76. MPZL2 MPZL2 31 0.913 - - - - - 0.913 - - -
77. tbx19 ENSDARG00000079187 133 0.913 - - - - 0.913 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
78. bmp6 ENSDARG00000015686 211 0.913 - - - - - 0.913 - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
79. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.913 - - - - 0.913 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
80. CR933820.2 CR933820.2 152 0.913 - - - - 0.913 - - - -
81. aatkb ENSDARG00000104442 392 0.912 - - - - 0.912 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
82. BX548000.3 BX548000.3 241 0.912 - - - - 0.912 - - - -
83. cyb561d2 ENSDARG00000044114 249 0.912 - - - - - 0.912 - - - cytochrome b561 family, member D2 [Source:ZFIN;Acc:ZDB-GENE-041010-205]
84. C8H1orf174 C8H1orf174 372 0.912 - - - - 0.912 - - - -
85. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.912 - - - - - 0.912 - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
86. rassf10a 417 0.912 - - - - 0.912 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
87. CHD6 ENSDARG00000017244 219 0.911 - - - - 0.911 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
88. wfikkn2a ENSDARG00000013460 859 0.911 - - - - 0.911 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
89. tmem135 ENSDARG00000069157 918 0.911 - - - - 0.911 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
90. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.911 - - - - 0.911 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
91. lgals9l1 ENSDARG00000025903 58 0.911 - - - - - 0.911 - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
92. pcdh18a ENSDARG00000089805 1096 0.911 - - - - 0.911 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
93. si:ch211-282k23.2 ENSDARG00000093591 447 0.911 - - - - 0.911 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
94. cyp19a1b ENSDARG00000098360 8 0.91 - - - - - 0.910 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
95. esrrb ENSDARG00000100847 636 0.91 - - - - 0.910 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
96. zgc:123248 zgc:123248 288 0.91 - - - - - 0.910 - - -
97. farp1 ENSDARG00000074381 406 0.91 - - - - 0.910 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
98. anapc1 ENSDARG00000075687 488 0.91 - - - - 0.910 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
99. nol8 ENSDARG00000044143 425 0.91 - - - - 0.910 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
100. invs ENSDARG00000002213 261 0.91 - - - - 0.910 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]

There are 1211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA