Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc23

Gene Name Gene ID Reads Annotation
lrrc23 ENSDARG00000006174 234 leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]










Genes with expression patterns similar to lrrc23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc23 ENSDARG00000006174 234 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
2. dapp1 ENSDARG00000039535 23 1.869 - - - - 0.917 - - 0.952 - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
3. dhrs13l1 ENSDARG00000098746 102 1.781 - - - - 0.920 - - 0.861 - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
4. CU683898.1 CU683898.1 203 1.769 - - - - - - 0.854 0.915 -
5. hs3st1 82 1.758 - - - - - - 0.829 0.929 - heparan sulfate (glucosamine) 3-O-sulfotransferase 1, transcript variant X1
6. CABZ01072607.1 ENSDARG00000113761 784 1.719 - - - - - - 0.836 0.883 - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
7. FAM177A1 ENSDARG00000079636 19 1.708 - - - - 0.918 - 0.790 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
8. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.702 - - - - - - 0.803 0.899 - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
9. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 1.698 0.701 0.997 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
10. pou5f3 ENSDARG00000044774 212 1.693 - - - - - - 0.749 0.944 - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
11. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.692 0.724 - - - - - - 0.968 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
12. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1.688 - - - - 0.724 - - 0.964 - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
13. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.68 - - - - - - 0.770 0.910 - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
14. BX511189.1 BX511189.1 34 1.65 - - - - 0.909 - 0.741 - -
15. gpr126 gpr126 51 1.643 - - - - - - 0.723 0.920 -
16. AL954676.2 AL954676.2 50 1.612 - - - - 0.884 0.728 - - -
17. NHSL1 NHSL1 182 1.578 0.724 - - - - - - 0.854 -
18. gpat2 ENSDARG00000053575 12 1.574 0.724 - - - - - 0.850 - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
19. tbata ENSDARG00000067831 193 1.57 0.775 - - - - - - 0.795 - thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
20. hcfc2 ENSDARG00000058127 490 1.564 - - - - - - 0.739 0.825 - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
21. CCDC117 CCDC117 412 1.559 - - - - - - 0.754 0.805 -
22. SYNGAP1_1 SYNGAP1_1 66 1.54 0.724 - - - - - 0.816 - -
23. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.494 0.754 - - - - - 0.740 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
24. CR932358.2 CR932358.2 15 1.492 0.724 - - - - - 0.768 - -
25. spag1a ENSDARG00000004017 1140 1.478 - - - - - - 0.708 0.770 - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
26. si:dkey-258p11.3 si:dkey-258p11.3 9 1.465 0.724 - - - - - 0.741 - -
27. ENSDARG00000093467 ENSDARG00000093467 34 1.465 0.724 - - - - - 0.741 - -
28. CCDC135 ENSDARG00000100231 48 1.45 - - - - - 0.710 0.740 - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
29. si:dkey-14d8.9 si:dkey-14d8.9 66 1.45 0.724 - - - - - 0.726 - -
30. CU929225.1 CU929225.1 104 1.444 - - - - - - 0.741 0.703 -
31. prdm1b ENSDARG00000098925 440 1.425 0.724 - - - - 0.701 - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
32. si:ch211-57i17.2 ENSDARG00000093354 58 1.408 0.701 - - - - - 0.707 - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
33. KLF8 ENSDARG00000060661 219 0.998 - 0.998 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
34. mis18a ENSDARG00000035333 555 0.998 - 0.998 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
35. mxra7 ENSDARG00000095300 332 0.998 - 0.998 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
36. wipf1 wipf1 760 0.997 - 0.997 - - - - - - -
37. ptpn4b ENSDARG00000000183 425 0.997 - 0.997 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
38. ppp1r14ba ENSDARG00000044541 792 0.997 - 0.997 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
39. si:dkey-11e23.9 ENSDARG00000095586 114 0.997 - 0.997 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
40. sept8b ENSDARG00000014233 223 0.997 - 0.997 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
41. pfkfb3 ENSDARG00000001953 656 0.997 - 0.997 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
42. RCSD1 RCSD1 144 0.997 - 0.997 - - - - - - -
43. SETDB2 ENSDARG00000101462 249 0.997 - 0.997 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
44. acadsb ENSDARG00000076780 2382 0.997 - 0.997 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
45. slc31a2 ENSDARG00000076092 251 0.997 - 0.997 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
46. fosl2 ENSDARG00000040623 2041 0.997 - 0.997 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
47. ptk6a ENSDARG00000017947 682 0.997 - 0.997 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
48. scn3b ENSDARG00000062359 242 0.997 - 0.997 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
49. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.997 - 0.997 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
50. C25H1orf51 C25H1orf51 2460 0.997 - 0.997 - - - - - - -
51. prr12a ENSDARG00000074229 1668 0.997 - 0.997 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
52. cnot3b ENSDARG00000019842 838 0.997 - 0.997 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
53. tpi1a ENSDARG00000025012 562 0.996 - 0.996 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
54. appl1 1019 0.996 - 0.996 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
55. csrnp2 ENSDARG00000075972 1650 0.996 - 0.996 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
56. zgc:123295 ENSDARG00000056324 361 0.996 - 0.996 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
57. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.996 - 0.996 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
58. DUSP28 ENSDARG00000059695 1135 0.996 - 0.996 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
59. igsf9a ENSDARG00000075864 1870 0.996 - 0.996 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
60. dhrs9 ENSDARG00000019260 250 0.996 - 0.996 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
61. pip4k2aa ENSDARG00000003776 865 0.995 - 0.995 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
62. cenpl ENSDARG00000038802 696 0.995 - 0.995 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
63. AL929204.1 AL929204.1 773 0.995 - 0.995 - - - - - - -
64. ptpn9a ENSDARG00000077495 2295 0.995 - 0.995 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
65. ppp2r5cb ENSDARG00000031200 1832 0.995 - 0.995 - - - - - - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
66. ubn2 ubn2 534 0.995 - 0.995 - - - - - - -
67. tsc22d1 ENSDARG00000038306 2413 0.995 - 0.995 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
68. arid1ab ENSDARG00000101891 1722 0.994 - 0.994 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
69. tnfrsf19 ENSDARG00000041869 796 0.994 - 0.994 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
70. ube2e2 ENSDARG00000034670 5918 0.994 - 0.994 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
71. zfyve28 ENSDARG00000060430 797 0.994 - 0.994 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
72. tox4 tox4 1671 0.994 - 0.994 - - - - - - -
73. jhdm1da jhdm1da 512 0.994 - 0.994 - - - - - - -
74. stxbp5b ENSDARG00000029234 760 0.994 - 0.994 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
75. larp1 ENSDARG00000101722 976 0.994 - 0.994 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
76. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.994 - 0.994 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
77. cdk11b ENSDARG00000102546 1579 0.994 - 0.994 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
78. igf2b ENSDARG00000033307, ENSDARG00000116125 1537 0.993 - 0.993 - - - - - - - insulin-like growth factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2935]
79. si:ch211-218c6.8 ENSDARG00000092364 1270 0.993 - 0.993 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
80. crot ENSDARG00000040352 701 0.993 - 0.993 - - - - - - - carnitine O-octanoyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-35]
81. im:7136729 im:7136729 1625 0.993 - 0.993 - - - - - - -
82. tnfaip2a ENSDARG00000043416 688 0.992 - 0.992 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
83. BRCC3 ENSDARG00000098242 1123 0.992 - 0.992 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
84. mtpn ENSDARG00000104018 4264 0.992 - 0.992 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
85. GABARAPL3 GABARAPL3 1198 0.992 - 0.992 - - - - - - -
86. sirt1 ENSDARG00000068064 1393 0.992 - 0.992 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
87. eya3 ENSDARG00000036100 1965 0.992 - 0.992 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
88. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.992 - 0.992 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
89. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.991 - 0.991 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
90. chpfa ENSDARG00000078392 1427 0.991 - 0.991 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
91. sp1 ENSDARG00000088347 1697 0.991 - 0.991 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
92. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.991 - 0.991 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
93. setd7 ENSDARG00000038858 1072 0.991 - 0.991 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
94. prrx1b ENSDARG00000042027 1128 0.991 - 0.991 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
95. CHD1 ENSDARG00000103787 1645 0.991 - 0.991 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
96. hsd17b14 ENSDARG00000054842 1394 0.991 - 0.991 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
97. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.991 - 0.991 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
98. MDP1 MDP1 687 0.991 - 0.991 - - - - - - -
99. meis4.1a meis4.1a 1165 0.991 - 0.991 - - - - - - -
100. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 0.99 - 0.990 - - - - - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]

There are 1140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA