Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc20

Gene Name Gene ID Reads Annotation
lrrc20 ENSDARG00000105018 1970 leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]










Genes with expression patterns similar to lrrc20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc20 ENSDARG00000105018 1970 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
2. myf6 ENSDARG00000029830 1911 2.733 - 0.887 - - - 0.961 0.885 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
3. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.651 - 0.838 - - - - 0.918 - 0.895 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
4. alpk3a ENSDARG00000078989 1992 2.592 - 0.822 - - - - 0.887 - 0.883 alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
5. sar1ab ENSDARG00000033320 3984 2.554 - - - - - 0.947 0.863 - 0.744 secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
6. pygma ENSDARG00000055518 15972 2.531 - 0.813 - - - 0.836 0.882 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
7. ryr1b ENSDARG00000023797 5693 2.531 - 0.856 - - - - 0.921 0.754 - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
8. fbxl22 ENSDARG00000096995 1290 2.486 - 0.728 - - - 0.992 0.766 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
9. CU571255.1 CU571255.1 902 2.472 - 0.754 - - - 0.991 0.727 - -
10. MYOM3 2720 2.461 - 0.892 - - - - 0.806 - 0.763 myomesin 3, transcript variant X2
11. plch1 ENSDARG00000079253 1216 2.442 - 0.833 - - - - 0.809 - 0.800 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
12. DNAJA4 ENSDARG00000051762 5657 2.432 - 0.800 0.717 - - - 0.915 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
13. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 2.423 - 0.708 - - - 0.991 - - 0.724 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
14. rp42-pen rp42-pen 3395 2.405 - 0.799 0.714 - - - 0.892 - -
15. klhl40a ENSDARG00000039052 2537 2.379 - 0.787 - 0.710 - - 0.882 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
16. col27a1a 1747 2.362 - 0.814 - - - - 0.768 - 0.780 collagen, type XXVII, alpha 1a
17. znf648 ENSDARG00000104823 1918 2.29 - 0.727 - - - - 0.847 0.716 - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
18. slc25a12 ENSDARG00000102362 2773 2.286 - 0.706 - - - - 0.784 - 0.796 solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
19. adkb ENSDARG00000095947 990 2.255 - 0.832 - 0.715 - - - 0.708 - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
20. adss ENSDARG00000002071 5497 1.907 - - - - - 0.994 0.913 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
21. unc45b ENSDARG00000008433 8298 1.864 - - - - - 0.982 0.882 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
22. cacna2d1a ENSDARG00000014804 1924 1.859 - - - - - 0.990 0.869 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
23. fh ENSDARG00000075132 1340 1.815 - - - - - 0.993 - - 0.822 fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
24. chid1 ENSDARG00000069673 675 1.808 - - - - - 0.990 - - 0.818 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
25. si:ch211-232i5.1 ENSDARG00000078072 1337 1.799 - - - - - 0.981 - - 0.818 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
26. six1b ENSDARG00000026473 1908 1.784 - 0.910 - - - - 0.874 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
27. dnajc15 ENSDARG00000038309 1274 1.775 - 0.786 - - - 0.989 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
28. BX322787.1 ENSDARG00000105779 381 1.752 - - - - - 0.989 0.763 - -
29. gk5 ENSDARG00000062864 738 1.75 - - - - - 0.987 - - 0.763 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
30. limch1a ENSDARG00000074275 2981 1.749 - 0.883 - - - - 0.866 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
31. MYOT ENSDARG00000076312 1791 1.749 - 0.840 - - - - 0.909 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
32. dus3l ENSDARG00000099528 1192 1.741 - - - - - 0.988 - - 0.753 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
33. C1QBP ENSDARG00000039887 11186 1.741 - - - - - 0.926 0.815 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
34. CABZ01039859.1 ENSDARG00000076361 540 1.74 - - - - - 0.974 - - 0.766 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
35. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.739 - - - - - 0.964 - - 0.775 myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
36. hapln1a ENSDARG00000089769 12334 1.739 - 0.847 - - - - 0.892 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
37. cacng1 cacng1 3118 1.722 - 0.853 - - - - 0.869 - -
38. smox ENSDARG00000036967 3816 1.721 - - - - - 0.966 - - 0.755 spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
39. stac3 ENSDARG00000098883 1765 1.718 - 0.845 - - - - 0.873 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
40. CABZ01041962.1 ENSDARG00000076082 690 1.714 - - - - - 0.989 0.725 - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
41. TMPO TMPO 3264 1.714 - 0.796 - - - - 0.918 - -
42. rps8a ENSDARG00000055996 2785 1.714 - - - - - 0.987 0.727 - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
43. znf106a ENSDARG00000016651 6049 1.713 - 0.800 - - - - 0.913 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
44. C13H10orf71 3489 1.713 - 0.847 - - - - 0.866 - - chromosome 13 C10orf71 homolog
45. PHB2 PHB2 3755 1.709 - 0.892 - - - - 0.817 - -
46. ntmt1 ENSDARG00000022399 5779 1.708 - 0.834 - - - - 0.874 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
47. tnw 16679 1.708 - 0.817 - - - - 0.891 - - tenascin W, transcript variant X2
48. zgc:158296 ENSDARG00000070923 3935 1.706 - 0.821 - - - - 0.885 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
49. CU638714.1 ENSDARG00000100303 2132 1.705 - 0.822 - - - - 0.883 - -
50. ndufs8a ENSDARG00000051986 17548 1.702 - - - - - 0.963 - - 0.739 NADH:ubiquinone oxidoreductase core subunit S8a [Source:ZFIN;Acc:ZDB-GENE-040426-2153]
51. slc25a46 ENSDARG00000035181 668 1.7 - 0.724 - - - 0.976 - - - solute carrier family 25, member 46 [Source:ZFIN;Acc:ZDB-GENE-040718-296]
52. DUSP13_1 DUSP13_1 425 1.7 - - - - - 0.991 0.709 - -
53. srl ENSDARG00000104587 11126 1.699 - 0.807 - - - - 0.892 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
54. pygmb ENSDARG00000013317 5454 1.698 - 0.835 - - - - 0.863 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
55. plecb ENSDARG00000021987 13621 1.697 - 0.856 - - - 0.841 - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
56. rpa2 ENSDARG00000037188 4284 1.697 - 0.703 - - - 0.994 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
57. rab5if ENSDARG00000074790 8807 1.696 - 0.797 - - - - 0.899 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
58. sptb ENSDARG00000030490 7128 1.696 - 0.803 - - - - 0.893 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
59. txlnbb ENSDARG00000076241 6396 1.696 - 0.812 - - - - 0.884 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
60. PTPLA PTPLA 4044 1.693 - 0.812 - - - - 0.881 - -
61. NRAP ENSDARG00000009341 3565 1.692 - 0.815 - - - - 0.877 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
62. trim55a ENSDARG00000029596 2858 1.692 - 0.828 - - - - 0.864 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
63. nmrk2 ENSDARG00000067848 10293 1.69 - 0.794 - - - - 0.896 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
64. rbm15 ENSDARG00000073847, ENSDARG00000110499 1307 1.689 - 0.701 - - - 0.988 - - - RNA binding motif protein 15 [Source:ZFIN;Acc:ZDB-GENE-041008-192]
65. gypc ENSDARG00000041546 1487 1.688 - 0.862 - - - - 0.826 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
66. MYOM1 MYOM1 3870 1.684 - 0.782 - - - - 0.902 - -
67. mybphb ENSDARG00000003081 5208 1.684 - 0.813 - - - - 0.871 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
68. hhatla ENSDARG00000039051 6598 1.682 - 0.778 - - - - 0.904 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
69. myoz2a ENSDARG00000012311 1373 1.682 - 0.826 - - - - 0.856 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
70. klhl21 ENSDARG00000039255 2550 1.677 - 0.860 - - - - 0.817 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
71. pbxip1a ENSDARG00000071015 4960 1.677 - 0.797 - - - - 0.880 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
72. USP15 958 1.676 - 0.806 - - - - - - 0.870 ubiquitin specific peptidase 15
73. tnnc1b ENSDARG00000037539 13945 1.676 - 0.836 - - - - 0.840 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
74. ktn1 ENSDARG00000032802 6251 1.673 - - - - - 0.951 0.722 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
75. srpk3 ENSDARG00000005916 1546 1.672 - 0.779 - - - - 0.893 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
76. usp28 ENSDARG00000008880 1850 1.672 - 0.798 - - - - 0.874 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
77. EHBP1L1 EHBP1L1 2500 1.672 - 0.758 - - - - 0.914 - -
78. uqcrc2b ENSDARG00000071691 13296 1.67 - - - - - 0.935 0.735 - - ubiquinol-cytochrome c reductase core protein 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1269]
79. CU633479.5 ENSDARG00000114818 1815 1.667 - 0.796 - - - - 0.871 - -
80. wdr90 ENSDARG00000079241 1163 1.667 - - - - - - 0.887 0.780 - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
81. tmem47 ENSDARG00000057322 4691 1.667 - 0.848 - - - - 0.819 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
82. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.666 - 0.832 - - - - - - 0.834 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
83. ryr3 ENSDARG00000071331 6795 1.665 - 0.781 - - - - 0.884 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
84. trdn ENSDARG00000041779 4283 1.665 - 0.779 - - - - 0.886 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
85. fitm1 ENSDARG00000056464 1759 1.664 - 0.751 - - - - 0.913 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
86. BX294434.1 ENSDARG00000061272 6493 1.664 - 0.764 - - - - 0.900 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
87. cct8 ENSDARG00000008243 6843 1.663 - 0.758 - - - - 0.905 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
88. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.662 - 0.729 - - - - 0.933 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
89. jph1a ENSDARG00000058603 2852 1.661 - 0.729 - - - - 0.932 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
90. cilp ENSDARG00000053362 1429 1.661 - 0.779 - - - - 0.882 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
91. chrna1 ENSDARG00000009021 2931 1.66 - 0.757 - - - - 0.903 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
92. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.656 - 0.810 - - - - 0.846 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
93. vwde ENSDARG00000103443 5758 1.655 - 0.823 - - - - 0.832 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
94. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.653 - 0.830 - - - - 0.823 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
95. chrnd ENSDARG00000019342 2728 1.652 - 0.760 - - - - 0.892 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
96. nt5dc3 ENSDARG00000062949 816 1.649 - - - - - - 0.820 - 0.829 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
97. egln1 egln1 3746 1.643 - 0.731 - - - - 0.912 - -
98. txlnba ENSDARG00000020594 9385 1.638 - - - 0.733 - - 0.905 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
99. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.636 - 0.807 - - - - 0.829 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
100. nudt3a ENSDARG00000016256 2713 1.635 - 0.806 - - - - 0.829 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]

There are 1699 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA