Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc18b

Gene Name Gene ID Reads Annotation
lrrc18b ENSDARG00000076236 5 leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]










Genes with expression patterns similar to lrrc18b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc18b ENSDARG00000076236 5 6 1.000 1.000 1.000 - 1.000 1.000 1.000 - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
2. UBASH3B_1 UBASH3B_1 28 2.961 1.000 0.961 - - - 1.000 - - -
3. si:ch211-237l4.6 ENSDARG00000056915 49 2.714 1.000 1.000 - - - - 0.714 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
4. mbnl3 ENSDARG00000016085 6 2.559 - - 0.729 - 0.830 1.000 - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
5. HYKK_1 HYKK_1 4 2 - 1.000 - - - 1.000 - - -
6. cdk5r1a ENSDARG00000037916 46 2 1.000 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
7. pcdh1g18 ENSDARG00000099447 7 2 1.000 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
8. FP236162.1 FP236162.1 2 2 1.000 - - - - 1.000 - - -
9. slc15a1a ENSDARG00000100315 23 2 - 1.000 - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
10. si:dkey-3n22.9 ENSDARG00000096273 1 2 - 1.000 1.000 - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
11. si:ch73-7i4.1 ENSDARG00000094554 771 2 1.000 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
12. si:ch211-197e7.1 ENSDARG00000095200 1 2 - 1.000 - - - 1.000 - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
13. CABZ01023601.1 CABZ01023601.1 1 2 - 1.000 - - - 1.000 - - -
14. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 2 1.000 - - - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
15. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 2 - - 1.000 - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
16. cep78 ENSDARG00000039229 1 2 - - 1.000 - - 1.000 - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]
17. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.903 - 1.000 - - - 0.903 - - -
18. xkr7 ENSDARG00000026333 18 1.875 - 0.875 1.000 - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
19. si:dkey-81p22.11 ENSDARG00000093797 68 1.854 0.854 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
20. si:dkey-14o6.7 si:dkey-14o6.7 9 1.854 0.854 1.000 - - - - - - -
21. iqsec3b ENSDARG00000093091 10 1.83 - - - - 0.830 1.000 - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
22. ninj2 ENSDARG00000079824 1 1.83 - 1.000 - - 0.830 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
23. CD97_2 CD97_2 15 1.83 - - 1.000 - 0.830 - - - -
24. trpa1a ENSDARG00000016699 43 1.828 - - 1.000 - - - 0.828 - - transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]
25. si:ch211-57m13.9 ENSDARG00000095884 10 1.8 - 1.000 0.800 - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
26. hcn3 ENSDARG00000027192 6 1.786 - - 1.000 - 0.786 - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
27. gcgrb ENSDARG00000036272 54 1.783 - - - - - 1.000 0.783 - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
28. si:dkey-14d8.9 si:dkey-14d8.9 66 1.771 1.000 0.771 - - - - - - -
29. si:busm1-180g5.7 si:busm1-180g5.7 15 1.77 - - - - 0.770 1.000 - - -
30. olfm1a ENSDARG00000018270 107 1.765 - 1.000 - - - - 0.765 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
31. NFATC4 ENSDARG00000054162 44 1.739 - 1.000 - - - - 0.739 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
32. EPB41L2 ENSDARG00000093374 7 1.737 - - - - 0.737 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
33. nid2b ENSDARG00000009471 4 1.729 - 1.000 0.729 - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
34. b3galnt2 ENSDARG00000046133 68 1.727 0.880 0.847 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
35. si:ch211-137i24.12 ENSDARG00000094537 35 1.71 - 0.710 - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
36. mapk15 ENSDARG00000100822 157 1.702 0.815 0.887 - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
37. fam136a ENSDARG00000098401 50 1.688 0.926 - - - - - 0.762 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
38. pex2 ENSDARG00000062421 83 1.676 0.787 - - - - - 0.889 - - peroxisomal biogenesis factor 2 [Source:ZFIN;Acc:ZDB-GENE-070530-2]
39. men1 ENSDARG00000089456 10 1.559 - - 0.800 - - 0.759 - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
40. si:dkey-10p5.7 26 1.515 - - - - 0.811 - 0.704 - - si:dkey-10p5.7
41. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.505 - 0.783 - - - - 0.722 - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
42. CABZ01069081.1 CABZ01069081.1 16 1.496 - - - - 0.757 - 0.739 - -
43. zgc:113220 ENSDARG00000014775 235 1.49 - - - - - 0.748 0.742 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
44. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
45. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
46. ZP2 ZP2 14 1 - - - - - 1.000 - - -
47. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
48. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
49. il1rapl2 ENSDARG00000037553 9 1 - - 1.000 - - - - - - interleukin 1 receptor accessory protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040219-5]
50. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
51. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
52. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
53. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
54. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
55. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
56. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
57. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
58. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
59. BX537305.1 ENSDARG00000113834 10 1 - - - - - 1.000 - - -
60. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
61. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
62. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
63. abch1 ENSDARG00000071341 1 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
64. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
65. si:ch211-198c19.2 si:ch211-198c19.2 165 1 - 1.000 - - - - - - -
66. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
67. PCDH10 PCDH10 7 1 - 1.000 - - - - - - -
68. lrrc3b ENSDARG00000063215 0 1 - 1.000 - - - - - - - leucine rich repeat containing 3B [Source:ZFIN;Acc:ZDB-GENE-070410-55]
69. crygn2 ENSDARG00000030411 2551 1 - - - - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
70. tyro3 ENSDARG00000005356 4 1 - - - - - 1.000 - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
71. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
72. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
73. metap2b ENSDARG00000102571 4 1 - - - - - 1.000 - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
74. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
75. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
76. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
77. si:dkey-56m15.2 ENSDARG00000101469 0 1 - - 1.000 - - - - - - si:dkey-56m15.2 [Source:ZFIN;Acc:ZDB-GENE-110913-122]
78. PDE6H 3 1 - - 1.000 - - - - - - phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
79. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
80. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1 - - - - - 1.000 - - -
81. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
82. ptprq ENSDARG00000008849 3 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
83. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - 1.000 - - -
84. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
85. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
86. VSIG10L ENSDARG00000089237 12 1 - - - - - 1.000 - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
87. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
88. MTR ENSDARG00000104906 0 1 - - 1.000 - - - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-031001-5]
89. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - 1.000 - - -
90. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
91. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
92. pla2g15 ENSDARG00000103271 4 1 - - - - - 1.000 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
93. PEG3_37 PEG3_37 4 1 - - 1.000 - - - - - -
94. BX119910.15 BX119910.15 4 1 - - 1.000 - - - - - -
95. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
96. mcm5_1 ENSDARG00000019507 10 1 - 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
97. PLXNB2_1 PLXNB2_1 10 1 - - - - - 1.000 - - -
98. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
99. PAQR8 ENSDARG00000088828 26 1 - - - - - 1.000 - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
100. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]

There are 1132 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA