Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc1

Gene Name Gene ID Reads Annotation
lrrc1 ENSDARG00000102684 1054 leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]










Genes with expression patterns similar to lrrc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc1 ENSDARG00000102684 1054 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]
2. asap2b ENSDARG00000019564 1660 2.188 - - - - - 0.716 0.740 0.732 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
3. cables2a ENSDARG00000076964 1330 1.66 - 0.899 - - - - 0.761 - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
4. HHLA2_2 HHLA2_2 857 1.66 - 0.788 - - - - 0.872 - -
5. grhl1 ENSDARG00000061391 1494 1.626 - - - - - - 0.778 0.848 - grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]
6. hexb ENSDARG00000034368 3505 1.624 - - - - - 0.856 0.768 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
7. sepw1 17630 1.615 - - - - - - 0.803 0.812 - selenoprotein W, 1
8. lims1 ENSDARG00000026985 2072 1.593 - - - - - 0.806 0.787 - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
9. gpd1b ENSDARG00000043180 6002 1.592 - - - - - 0.824 0.768 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
10. CARD14 ENSDARG00000103485 888 1.591 - - - - - - 0.828 0.763 - caspase recruitment domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-090310-1]
11. zgc:92360 ENSDARG00000038151 2161 1.585 - - - - - 0.745 0.840 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
12. pepd ENSDARG00000102249 2644 1.579 - - - - - 0.784 0.795 - - peptidase D [Source:ZFIN;Acc:ZDB-GENE-030131-9444]
13. ppl ENSDARG00000101043 9196 1.579 - - - - - - 0.818 0.761 - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
14. zgc:193711 ENSDARG00000101901 503 1.577 - - - - - 0.802 0.775 - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
15. cpvl ENSDARG00000056480 2115 1.577 - - - - - 0.809 0.768 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
16. tmem110l ENSDARG00000045518 1783 1.573 - - - - - 0.795 0.778 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
17. tmem45b ENSDARG00000056239 2395 1.572 - - - - - - 0.780 0.792 - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
18. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.571 - 0.720 - - - - 0.851 - - bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
19. atp6v0ca ENSDARG00000057853 23277 1.57 - - - - - 0.751 0.819 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
20. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.57 - - - - - 0.734 0.836 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
21. ap1s3b ENSDARG00000027966 1064 1.561 - - - - - 0.757 0.804 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
22. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 1.561 - - - - - 0.715 0.846 - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
23. casp9 ENSDARG00000004325 306 1.558 - - - 0.835 - 0.723 - - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
24. polr2m ENSDARG00000074968, ENSDARG00000113507 352 1.558 - 0.735 - - - - - 0.823 - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
25. aim1a 2981 1.556 - - - - - 0.808 0.748 - - crystallin beta-gamma domain containing 1a, transcript variant X1
26. cyp2v1 ENSDARG00000018485 694 1.556 - - - - - 0.783 0.773 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
27. frem2b ENSDARG00000102626 1416 1.552 - - - - - 0.758 0.794 - - Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
28. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.551 - - - - - 0.725 0.826 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
29. abcd3a ENSDARG00000104085, ENSDARG00000110888, ENSDARG00000116461 888 1.546 - 0.819 - - - - 0.727 - - ATP-binding cassette, sub-family D (ALD), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2868]
30. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.544 - - - - - 0.789 0.755 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
31. BX957362.1 ENSDARG00000105682 1941 1.529 - 0.714 - - - - 0.815 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
32. lama5 ENSDARG00000058543 2782 1.529 - - - - - - 0.710 0.819 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
33. trpc4apb ENSDARG00000020647 670 1.524 - 0.709 - - - - - 0.815 - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
34. nt5c3a ENSDARG00000058597 14299 1.523 - - - - - 0.769 0.754 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
35. f2rl1.2 ENSDARG00000077540 822 1.523 - - - - - - 0.763 0.760 - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
36. CD68 CD68 4599 1.522 - - - - - 0.743 0.779 - -
37. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.522 - - - - - 0.776 0.746 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
38. dlx6a ENSDARG00000042291 185 1.516 - - - - - 0.719 - 0.797 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
39. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.514 - - - - - - 0.742 0.772 - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
40. acsl3a ENSDARG00000032079 897 1.513 - - - - - 0.731 - 0.782 - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
41. hoga1 ENSDARG00000018944 800 1.507 - 0.718 - - - - 0.789 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
42. BX004812.1 ENSDARG00000096968 5467 1.502 - - - - - 0.755 0.747 - -
43. si:dkey-102c8.3 ENSDARG00000113572 4779 1.491 - - - - - 0.733 0.758 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
44. cd2ap ENSDARG00000015224 2830 1.486 - - - - - 0.759 0.727 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
45. letm1 ENSDARG00000056978, ENSDARG00000110254 1079 1.484 - 0.712 - - - - 0.772 - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-154]
46. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.483 - - - - - 0.754 0.729 - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
47. xrn1 ENSDARG00000091652 2864 1.483 - 0.703 - - - - - 0.780 - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
48. dock5 ENSDARG00000001968 467 1.482 - - - - - - 0.723 0.759 - dedicator of cytokinesis 5 [Source:ZFIN;Acc:ZDB-GENE-080108-4]
49. rhbdf1 rhbdf1 1608 1.482 - - - - - 0.773 0.709 - -
50. relb ENSDARG00000086173 762 1.479 - - - - - 0.730 0.749 - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
51. hlfa ENSDARG00000074752 762 1.477 - - - - - 0.713 0.764 - - hepatic leukemia factor a [Source:ZFIN;Acc:ZDB-GENE-061013-159]
52. ptplb ptplb 6135 1.473 - - - - - 0.756 0.717 - -
53. ostf1 ENSDARG00000091555, ENSDARG00000114550 582 1.471 - 0.751 - - - 0.720 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
54. ankrd54 ENSDARG00000055743 1575 1.471 - 0.759 - - - - 0.712 - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
55. bach1 bach1 1121 1.46 - - - - - 0.742 0.718 - -
56. LIMD2 ENSDARG00000078092 3414 1.454 - - - - - 0.741 0.713 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
57. ugt1b4 ENSDARG00000097024 1848 1.449 - 0.708 - - - - 0.741 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
58. gata6 ENSDARG00000103589 746 1.447 - - - - - 0.715 0.732 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
59. aldh4a1 ENSDARG00000038207 4639 1.439 - - - - - 0.732 0.707 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
60. DIP2C DIP2C 222 1.43 - - - - - 0.703 - 0.727 -
61. golga7 ENSDARG00000057676 4691 1.43 - 0.704 - - - - 0.726 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
62. limk2 ENSDARG00000005104 2598 1.429 - 0.721 - - - - 0.708 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
63. xrcc4 ENSDARG00000010732 553 1.425 - 0.721 - - - - - 0.704 - X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
64. OPLAH ENSDARG00000045123 707 1.422 - - - - - 0.716 0.706 - - 5-oxoprolinase, ATP-hydrolysing [Source:ZFIN;Acc:ZDB-GENE-121214-293]
65. si:dkey-97i18.5 si:dkey-97i18.5 1362 0.923 - - - - - - 0.923 - -
66. commd1 ENSDARG00000031203 340 0.919 - 0.919 - - - - - - - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
67. SVIL SVIL 2589 0.898 - - - - - - 0.898 - -
68. MARVELD3 ENSDARG00000099654 325 0.895 - - - - - - - 0.895 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
69. pafah1b1a ENSDARG00000032013 3183 0.889 - - - - - - 0.889 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
70. SALL2 ENSDARG00000075116 527 0.882 - 0.882 - - - - - - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
71. NUAK1 NUAK1 1074 0.877 - - - - - - 0.877 - -
72. mapk1 ENSDARG00000027552, ENSDARG00000111915 1969 0.876 - - - - - - 0.876 - - mitogen-activated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-2]
73. lpar2a ENSDARG00000042338 285 0.875 - - - - - - - 0.875 - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
74. pon1 ENSDARG00000032496 1375 0.87 - - - - - - 0.870 - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
75. shc1 ENSDARG00000075437 3278 0.869 - - - - - - 0.869 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
76. elovl7b ENSDARG00000100185 2032 0.866 - - - - - - 0.866 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
77. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 0.862 - - - 0.862 - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
78. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 0.859 - - - - - - 0.859 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
79. SMIM22 ENSDARG00000105068 246 0.858 - - - - - - - 0.858 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
80. abl2 ENSDARG00000013841 145 0.857 - - - - - - - 0.857 - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
81. zgc:112484 zgc:112484 780 0.855 - - - - - - - 0.855 -
82. tpst1 ENSDARG00000073872 2490 0.855 - - - - - - 0.855 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
83. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 0.855 - - - - - - 0.855 - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
84. TMEM30B ENSDARG00000054122 1519 0.855 - - - - - - - 0.855 - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
85. zgc:56530 zgc:56530 6300 0.855 - - - - - - 0.855 - -
86. cyfip1 ENSDARG00000044345 5483 0.854 - - - - - - 0.854 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
87. sptssa ENSDARG00000071203 2306 0.852 - - - - - - 0.852 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
88. C19H18orf21 C19H18orf21 338 0.851 - - - - - - - 0.851 -
89. adpgk2 ENSDARG00000062785 8229 0.849 - - - - - 0.849 - - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
90. jak2a ENSDARG00000104808 1658 0.848 - - - - - 0.848 - - - Janus kinase 2a [Source:ZFIN;Acc:ZDB-GENE-980526-481]
91. cars ENSDARG00000036164 2019 0.848 - - - - - - - 0.848 - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
92. C1H4orf33 C1H4orf33 2097 0.847 - - - - - - 0.847 - -
93. ppp6r2b ENSDARG00000069654 323 0.847 - - - 0.847 - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
94. degs2 ENSDARG00000042544 1912 0.847 - - - - - - 0.847 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
95. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 0.846 - - - - - - 0.846 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
96. tcn2l tcn2l 2428 0.846 - - - - - - 0.846 - -
97. slc48a1b ENSDARG00000026109 1427 0.845 - - - - - - 0.845 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
98. si:dkey-240e12.6 ENSDARG00000110137 674 0.845 - - - - - - - 0.845 - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
99. kita ENSDARG00000043317 1091 0.844 - 0.844 - - - - - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
100. SH3D21 ENSDARG00000099448 1726 0.844 - - - - - - - 0.844 - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA