Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp2b

Gene Name Gene ID Reads Annotation
lrp2b ENSDARG00000007906 23 low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]










Genes with expression patterns similar to lrp2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp2b ENSDARG00000007906 23 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
2. ntrk1 ENSDARG00000004586 19 2 1.000 1.000 - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
3. si:ch211-225h9.2 si:ch211-225h9.2 16 2 1.000 1.000 - - - - - - -
4. hs6st3b ENSDARG00000069500 5 2 1.000 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
5. VOPP1_1 VOPP1_1 73 2 1.000 1.000 - - - - - - -
6. CT573248.1 ENSDARG00000074029 10 1.925 - 1.000 - - 0.925 - - - -
7. dhrs13l1 ENSDARG00000098746 102 1.914 - 1.000 - - 0.914 - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
8. rsph4a ENSDARG00000067606 132 1.889 1.000 0.889 - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
9. si:ch211-286e11.3 si:ch211-286e11.3 20 1.887 1.000 - - 0.887 - - - - -
10. cd151l ENSDARG00000068629 16 1.884 - 1.000 - 0.884 - - - - - CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
11. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1.867 1.000 - - - - - 0.867 - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
12. CR847844.5 CR847844.5 5 1.867 - 1.000 - - - - 0.867 - -
13. cdhr1a ENSDARG00000004643 7 1.867 - 1.000 - - - - 0.867 - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
14. mir15a-1 36 1.867 1.000 - - - - - 0.867 - - microRNA 15a-1
15. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.867 1.000 - - - - - 0.867 - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
16. si:ch211-251p5.3 si:ch211-251p5.3 39 1.85 - 1.000 - - - 0.850 - - -
17. zgc:175284 ENSDARG00000078159 29 1.834 - - 0.967 - - - 0.867 - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
18. cpa2 ENSDARG00000010146 28 1.8 1.000 - - - - - 0.800 - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. isg15 ENSDARG00000086374 8 1.796 1.000 - 0.796 - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
20. zgc:77112 ENSDARG00000015657 24 1.794 - - - - 0.927 - 0.867 - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
21. si:dkey-4i23.7 si:dkey-4i23.7 19 1.787 - - - - 0.920 - 0.867 - -
22. lhfpl3 ENSDARG00000021595 107 1.771 0.771 1.000 - - - - - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
23. C14H5orf45 C14H5orf45 83 1.764 0.764 1.000 - - - - - - -
24. BX640518.1 BX640518.1 24 1.764 0.764 1.000 - - - - - - -
25. CU457819.2 ENSDARG00000105374 8 1.748 - 1.000 0.748 - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
26. si:dkey-23a23.2 ENSDARG00000023036 123 1.736 - 0.899 - - - - 0.837 - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
27. LAMTOR1 ENSDARG00000076464 27 1.731 - 0.864 - - - - 0.867 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
28. KIF9 ENSDARG00000031693 11 1.722 - 1.000 - - - - 0.722 - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
29. si:dkey-189h5.6 ENSDARG00000095188 50 1.721 - 1.000 - - - - 0.721 - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
30. si:dkey-238m4.1 si:dkey-238m4.1 71 1.718 0.903 - - - - - 0.815 - -
31. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1.716 1.000 - - - - - 0.716 - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
32. CR394546.2 ENSDARG00000090061 3 1.715 1.000 - - - - 0.715 - - -
33. xkr6 xkr6 286 1.714 1.000 0.714 - - - - - - -
34. CABZ01073380.1 CABZ01073380.1 5 1.71 - 1.000 0.710 - - - - - -
35. AL935174.1 ENSDARG00000109674 18 1.707 - 1.000 - 0.707 - - - - -
36. dapp1 ENSDARG00000039535 23 1.664 - - - 0.745 0.919 - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
37. nxph1 ENSDARG00000033447 182 1.657 0.711 0.946 - - - - - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
38. TMEM196 ENSDARG00000114159 80 1.649 0.764 0.885 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
39. mgrn1b ENSDARG00000004796 18 1.631 0.764 - - - - - 0.867 - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
40. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1.555 - 0.705 - - - 0.850 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
41. CABZ01083442.1 ENSDARG00000105714 36 1.532 - - - 0.744 - - 0.788 - - si:cabz01083442.1 [Source:NCBI gene;Acc:101883419]
42. ptpn2a ENSDARG00000016481 493 1.52 - - - - - 0.768 0.752 - - protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
43. si:ch211-197h24.7 si:ch211-197h24.7 25 1.518 - - - - - 0.703 0.815 - -
44. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.516 - - - - - 0.702 0.814 - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
45. il17d ENSDARG00000010700, ENSDARG00000115462 102 1.49 - 0.727 - - - - 0.763 - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
46. specc1 ENSDARG00000029480 54 1 - 1.000 - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
47. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
48. AL935272.2 AL935272.2 37 1 - 1.000 - - - - - - -
49. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
50. si:dkey-21o19.6 si:dkey-21o19.6 18 1 1.000 - - - - - - - -
51. NETO2 121 1 - 1.000 - - - - - - - neuropilin and tolloid like 2, transcript variant X2
52. rapgef6 ENSDARG00000010945 3 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]
53. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
54. si:ch211-11p18.6 ENSDARG00000077068, ENSDARG00000102360 0 1 - 1.000 - - - - - - - si:ch211-11p18.6 [Source:ZFIN;Acc:ZDB-GENE-070912-24]
55. PARP9 ENSDARG00000006848 34 1 - 1.000 - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
56. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
57. ipp ENSDARG00000075339 3 1 - 1.000 - - - - - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
58. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - - - 1.000 - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
59. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 - 1.000 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
60. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
61. slc34a1b ENSDARG00000054658 1 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
62. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
63. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - 1.000 - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
64. cbln4 ENSDARG00000061240 67 1 - 1.000 - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
65. pcsk2 ENSDARG00000019451 442 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
66. ccdc147 ccdc147 39 1 - 1.000 - - - - - - -
67. PLD1 PLD1 158 1 1.000 - - - - - - - -
68. irf4a ENSDARG00000006560 4 1 - 1.000 - - - - - - - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
69. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
70. AKNA_1 AKNA_1 2 1 - 1.000 - - - - - - -
71. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
72. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
73. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
74. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
75. si:dkey-182i3.9 ENSDARG00000096575 56 1 - 1.000 - - - - - - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
76. si:ch211-211i20.1 si:ch211-211i20.1 29 1 - 1.000 - - - - - - -
77. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
78. LOXL2 LOXL2 2 1 - 1.000 - - - - - - -
79. PRODH PRODH 13 1 - 1.000 - - - - - - -
80. si:ch211-208f21.4 si:ch211-208f21.4 4 1 1.000 - - - - - - - -
81. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
82. KHNYN ENSDARG00000092488 10 1 1.000 - - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
83. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
84. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
85. alx4b ENSDARG00000074442 29 1 - 1.000 - - - - - - - ALX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-050208-140]
86. bai3 bai3 92 1 - 1.000 - - - - - - -
87. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
88. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
89. ONECUT2 ENSDARG00000090387 8 1 - 1.000 - - - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
90. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
91. UNC13A UNC13A 36 1 1.000 - - - - - - - -
92. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
93. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
94. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
95. slc7a10a ENSDARG00000008100 178 1 - 1.000 - - - - - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
96. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
97. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
98. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
99. CABZ01012080.1 CABZ01012080.1 10 1 - 1.000 - - - - - - -
100. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA