Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp2a

Gene Name Gene ID Reads Annotation
lrp2a ENSDARG00000102506 212 low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]










Genes with expression patterns similar to lrp2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp2a ENSDARG00000102506 212 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]
2. fat3a ENSDARG00000033840 902 2.3 0.750 0.844 - - - - 0.706 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
3. nlgn3a ENSDARG00000104786 91 1.749 - 0.859 - - - - 0.890 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
4. MCTP1 MCTP1 219 1.708 - 0.878 - - - - 0.830 - -
5. ptprnb ENSDARG00000077047 2743 1.622 - 0.791 - - - - 0.831 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
6. trim3a ENSDARG00000063711 44 1.611 0.728 - - - - - 0.883 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
7. brf2 ENSDARG00000002060 81 1.604 - - - - - 0.842 0.762 - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
8. gpc5 gpc5 184 1.601 0.795 - - - - - 0.806 - -
9. si:ch211-198k9.10 si:ch211-198k9.10 47 1.58 - - - - 0.719 - 0.861 - -
10. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.573 - 0.846 - - - - 0.727 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
11. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.564 - 0.844 - - - - 0.720 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
12. nhlh2 ENSDARG00000025495 1860 1.561 0.725 0.836 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
13. FAM196A 82 1.561 - 0.853 - - - - 0.708 - - family with sequence similarity 196 member A
14. GAB2 ENSDARG00000105120 147 1.558 - 0.803 - - 0.755 - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
15. vcam1 vcam1 243 1.552 - - - - - 0.720 0.832 - -
16. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.547 - - - - - 0.722 0.825 - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
17. ascl1a ENSDARG00000038386 1290 1.523 - 0.794 - - - - 0.729 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
18. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.501 - 0.754 - - - - 0.747 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
19. nrsn1 ENSDARG00000111235 123 1.484 - 0.756 - - - - 0.728 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
20. olig2 ENSDARG00000040946 1405 1.482 - 0.734 - - - - 0.748 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
21. scg2a 800 1.474 - 0.767 - - - - 0.707 - - secretogranin II (chromogranin C) a
22. foxd1 ENSDARG00000029179 726 1.473 0.715 0.758 - - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
23. UBL7 UBL7 197 1.466 - - 0.739 - - - 0.727 - -
24. nptx1l ENSDARG00000074671 569 1.458 - 0.737 - - - - 0.721 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
25. her13 ENSDARG00000007097 2000 1.436 - 0.703 - - - - 0.733 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
26. ppp2r2ba 321 1.416 0.705 0.711 - - - - - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
27. ADAMTS3 ENSDARG00000060127 2839 1.413 - 0.706 - - - - 0.707 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
28. rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 0.976 - 0.976 - - - - - - - ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]
29. cax1 ENSDARG00000045601 366 0.958 - 0.958 - - - - - - - cation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
30. gch2 ENSDARG00000099101 45623 0.956 - 0.956 - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
31. slc8a4b ENSDARG00000037145 46 0.951 - - - - - - 0.951 - - solute carrier family 8 (sodium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-050809-103]
32. tmeff1a ENSDARG00000008191 74 0.95 - - - - - - 0.950 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
33. zgc:163143 ENSDARG00000076437 166 0.932 - 0.932 - - - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
34. si:dkey-100n10.2 101 0.931 - - - - - - 0.931 - - si:dkey-100n10.2
35. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.927 - - - - - - 0.927 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
36. nes ENSDARG00000088805 2710 0.926 - 0.926 - - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
37. HSPA4L ENSDARG00000053544 363 0.925 - 0.925 - - - - - - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
38. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 0.924 - 0.924 - - - - - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
39. ntn1b ENSDARG00000022531 248 0.923 - - - - - - 0.923 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
40. pax6a ENSDARG00000103379 3061 0.918 - 0.918 - - - - - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
41. rars2 ENSDARG00000032277 54 0.918 - 0.918 - - - - - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
42. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 0.916 - 0.916 - - - - - - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
43. armc4 ENSDARG00000055128 220 0.914 - - - - - - 0.914 - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
44. slc35g2b ENSDARG00000045447 378 0.913 - 0.913 - - - - - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
45. pmela ENSDARG00000091298 5179 0.91 - 0.910 - - - - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
46. RIBC2 ENSDARG00000075177 445 0.91 - - - - - - 0.910 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
47. kifap3a ENSDARG00000008639 721 0.905 - - - - - - 0.905 - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
48. MAP1A MAP1A 847 0.905 - 0.905 - - - - - - -
49. pyyb ENSDARG00000035832 18 0.903 - - - - - - 0.903 - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
50. wu:fb15e04 wu:fb15e04 1713 0.902 - 0.902 - - - - - - -
51. kin ENSDARG00000045515 109 0.9 - - - - - - 0.900 - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
52. zgc:158654 19 0.899 - - - - - - 0.899 - - zgc:158654, transcript variant X1
53. fgd 377 0.899 - 0.899 - - - - - - - faciogenital dysplasia
54. CABZ01029738.1 CABZ01029738.1 327 0.898 - 0.898 - - - - - - -
55. C20H2orf44 C20H2orf44 486 0.896 - 0.896 - - - - - - -
56. C8H1orf194 C8H1orf194 111 0.896 - - - - - - 0.896 - -
57. csf1b ENSDARG00000068263 248 0.896 - 0.896 - - - - - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
58. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.894 - 0.894 - - - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
59. CU457819.3 ENSDARG00000105418 23 0.894 0.894 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
60. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.893 - 0.893 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
61. fsd1 ENSDARG00000062017 207 0.89 - 0.890 - - - - - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
62. gad2 ENSDARG00000015537 724 0.888 - 0.888 - - - - - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
63. GLRA3 ENSDARG00000011066 242 0.887 - 0.887 - - - - - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
64. zgc:162576 zgc:162576 56 0.887 - - - - - - 0.887 - -
65. batf3 ENSDARG00000042577 34 0.887 - 0.887 - - - - - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
66. rnf32 ENSDARG00000060035, ENSDARG00000116092 122 0.886 - - - - - - 0.886 - - ring finger protein 32 [Source:ZFIN;Acc:ZDB-GENE-061013-39]
67. pth1a ENSDARG00000093738 106 0.884 - - - - - - 0.884 - - parathyroid hormone 1a [Source:ZFIN;Acc:ZDB-GENE-040623-1]
68. tbkbp1 ENSDARG00000061473 24 0.883 - - - - - - 0.883 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
69. kif3cb ENSDARG00000079500 935 0.883 - - - - - - 0.883 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
70. BX004873.3 BX004873.3 59 0.883 - - - - - - 0.883 - -
71. edar ENSDARG00000099088 1 0.883 - - - - - - 0.883 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
72. si:dkey-258f14.3 ENSDARG00000075974 9 0.883 - - - - - - 0.883 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
73. sp5l ENSDARG00000115868 361 0.883 - - - - - - 0.883 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
74. itga6l ENSDARG00000056018 1 0.883 - - - - - - 0.883 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
75. BX323876.2 ENSDARG00000104577 62 0.883 - - - - - - 0.883 - -
76. BPIFC BPIFC 11 0.883 - - - - - - 0.883 - -
77. CR391967.1 CR391967.1 135 0.883 - - - - - - 0.883 - -
78. pcyox1 ENSDARG00000103052 20 0.883 - - - - - - 0.883 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
79. CMKLR1_1 CMKLR1_1 2 0.883 - - - - - - 0.883 - -
80. si:dkey-239j18.3 ENSDARG00000089806 12918 0.883 - - - - - - 0.883 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
81. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 0.883 - - - - - - 0.883 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
82. ciz1a ENSDARG00000089781 20 0.883 - - - - - - 0.883 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
83. C6H22orf23 C6H22orf23 15 0.883 - - - - - - 0.883 - -
84. BX005421.3 ENSDARG00000114309 7 0.883 - - - - - - 0.883 - -
85. si:dkey-222f8.6 si:dkey-222f8.6 7 0.883 - - - - - - 0.883 - -
86. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.883 - - - - - - 0.883 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
87. FNDC7_1 FNDC7_1 3 0.883 - - - - - - 0.883 - -
88. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.883 - - - - - - 0.883 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
89. si:dkey-189j19.1 si:dkey-189j19.1 0 0.883 - - - - - - 0.883 - -
90. TRPC4_1 TRPC4_1 212 0.883 - - - - - - 0.883 - -
91. PLCXD1_2 PLCXD1_2 9 0.883 - - - - - - 0.883 - -
92. CIT_1 CIT_1 6 0.883 - - - - - - 0.883 - -
93. ptf1a ENSDARG00000014479 349 0.883 - - - - - - 0.883 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
94. nfatc1 ENSDARG00000036168 16 0.883 - - - - - - 0.883 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
95. gpr19 ENSDARG00000102226 17 0.883 - - - - - - 0.883 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
96. hapln4 ENSDARG00000018542 10 0.883 - - - - - - 0.883 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
97. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 0.883 - - - - - - 0.883 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
98. rcv1 rcv1 77 0.883 - - - - - - 0.883 - -
99. ccdc170 ENSDARG00000016161 18 0.883 - - - - - - 0.883 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
100. ccdc24 ENSDARG00000038793 7 0.883 - - - - - - 0.883 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]

There are 809 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA