Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp1bb

Gene Name Gene ID Reads Annotation
lrp1bb ENSDARG00000061517 172 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]










Genes with expression patterns similar to lrp1bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1bb ENSDARG00000061517 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
2. ZNF337_20 ZNF337_20 65 2.547 0.750 - 0.956 - - 0.841 - - -
3. PRF1 PRF1 69 2.483 0.819 0.839 - - 0.825 - - - -
4. angptl6 ENSDARG00000020265 273 1.918 - - - - - 0.967 - - 0.951 angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
5. arhgap25 ENSDARG00000061784 112 1.869 - - 0.920 - - 0.949 - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
6. zgc:112263 zgc:112263 473 1.867 - - - - - 0.879 - - 0.988
7. MYL4 ENSDARG00000011519 309 1.805 - 0.837 - - - - - - 0.968 myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
8. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.787 - 0.806 - - - - - - 0.981 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
9. psph ENSDARG00000040314 1359 1.769 - - - - - 0.801 - - 0.968 phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
10. erbb3a ENSDARG00000006202 903 1.768 - - 0.807 - - - - - 0.961 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
11. slc16a5 slc16a5 173 1.753 - - 0.833 - - 0.920 - - -
12. CT030712.1 ENSDARG00000044355 83 1.746 - - - - - - 0.752 - 0.994 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
13. PLD1 PLD1 158 1.742 - - 0.919 - - 0.823 - - -
14. cog2 ENSDARG00000004037 462 1.729 - - - - - - 0.749 - 0.980 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
15. TIMP4 TIMP4 599 1.728 - 0.742 - - - - - - 0.986
16. BX255936.1 BX255936.1 327 1.726 - - - - - 0.777 - - 0.949
17. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.723 - - - - - 0.971 0.752 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
18. irak1bp1 ENSDARG00000036903, ENSDARG00000110205 426 1.714 - 0.834 - - - - 0.880 - - interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-272]
19. PEG3_10 PEG3_10 45 1.711 - - - - - 0.959 0.752 - -
20. OVOL1 75 1.711 - - - - - 0.959 0.752 - - ovo-like zinc finger 1, transcript variant X1
21. BX004880.1 BX004880.1 638 1.701 - - 0.759 - - - - - 0.942
22. CLINT1 CLINT1 558 1.699 - - - - - 0.763 - - 0.936
23. cd40 ENSDARG00000054968 90 1.698 - - 0.965 - 0.733 - - - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
24. si:ch73-91k6.2 ENSDARG00000091598 727 1.693 - - - - - 0.735 - - 0.958 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
25. plch1 ENSDARG00000079253 1216 1.691 - 0.719 - - - - - - 0.972 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
26. abcg2c ENSDARG00000058574 1261 1.685 - - - - - 0.764 - - 0.921 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
27. ugt2b3 46 1.681 0.714 - - - - 0.967 - - - UDP glucuronosyltransferase 2 family, polypeptide B3
28. FRMPD2 ENSDARG00000074119 5 1.673 0.714 - - - - 0.959 - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
29. rnf175 ENSDARG00000037647 1233 1.669 - - 0.749 - - - - - 0.920 ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
30. zgc:110353 ENSDARG00000039443 80 1.657 0.714 - 0.943 - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
31. cacna2d2 cacna2d2 16 1.652 - 0.809 - - 0.843 - - - -
32. si:ch211-264e16.1 ENSDARG00000068947 1358 1.652 - 0.843 0.809 - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
33. cry4 ENSDARG00000011890 980 1.649 - - 0.711 - - - - - 0.938 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
34. btr01 ENSDARG00000051965 610 1.642 - - 0.774 - - 0.868 - - - bloodthirsty-related gene family, member 1 [Source:ZFIN;Acc:ZDB-GENE-090511-2]
35. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 1.631 - 0.803 - - 0.828 - - - -
36. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.624 - - - - - 0.872 0.752 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
37. METRNL 166 1.622 - 0.720 0.902 - - - - - - meteorin, glial cell differentiation regulator-like
38. zgc:66313 ENSDARG00000030357 45 1.621 - 0.838 - - - 0.783 - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
39. sigirr ENSDARG00000062204 52 1.617 - 0.702 0.915 - - - - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
40. kcnh2 kcnh2 76 1.616 - 0.809 - - 0.807 - - - -
41. fzd10 ENSDARG00000068213 1364 1.609 - - - - - 0.857 - - 0.752 frizzled class receptor 10 [Source:ZFIN;Acc:ZDB-GENE-990415-220]
42. CABZ01062083.1 CABZ01062083.1 40 1.608 - 0.802 - - - - 0.806 - -
43. CU638868.1 ENSDARG00000115797 487 1.592 0.750 - - - - 0.842 - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
44. cox5b2 ENSDARG00000068738 182 1.59 0.792 - - - 0.798 - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
45. itga9 ENSDARG00000032435 35 1.577 - - - - - 0.845 0.732 - - integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
46. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.577 - 0.802 - - 0.775 - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
47. PEG3_4 PEG3_4 256 1.557 - 0.719 - - - 0.838 - - -
48. ANKRD34A 22 1.554 - 0.802 - - - - 0.752 - - ankyrin repeat domain 34A, transcript variant X2
49. sinup ENSDARG00000017163 5 1.554 - 0.802 - - - - 0.752 - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
50. myf5 ENSDARG00000007277 1051 1.553 - 0.783 - - - - 0.770 - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
51. CABZ01092943.1 CABZ01092943.1 29 1.545 - 0.838 - - - - 0.707 - -
52. mknk2a ENSDARG00000011373 230 1.541 - 0.735 - - - 0.806 - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
53. lrrc20 ENSDARG00000105018 1970 1.535 - 0.731 - - - - - - 0.804 leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
54. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 1.534 - 0.780 - - - 0.754 - - - F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
55. rpph1 33 1.533 - 0.816 - - - - 0.717 - - ribonuclease P RNA component H1
56. ispd ENSDARG00000005034 173 1.533 - 0.745 - - - 0.788 - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
57. mipep ENSDARG00000055344 63 1.527 - 0.759 - - - - 0.768 - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
58. C6H21orf58 C6H21orf58 14 1.523 0.714 0.809 - - - - - - -
59. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.523 0.714 0.809 - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
60. U3 U3 287 1.506 - 0.714 - - - 0.792 - - -
61. sst2 ENSDARG00000014190 617 1.504 0.714 - - - - - 0.790 - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
62. si:dkey-60a16.1 ENSDARG00000037073 163 1.499 - - 0.703 - - 0.796 - - - si:dkey-60a16.1 [Source:ZFIN;Acc:ZDB-GENE-040724-244]
63. wdr55 ENSDARG00000007217 196 1.495 - - 0.718 - - - 0.777 - - WD repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-040924-7]
64. zgc:173577 ENSDARG00000098923 71 1.495 - 0.743 - - - - 0.752 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
65. pgm2l1 ENSDARG00000014704 140 1.493 - 0.700 - - - 0.793 - - - phosphoglucomutase 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-041008-205]
66. npdc1 npdc1 221 1.493 0.714 0.779 - - - - - - -
67. RBM25 RBM25 202 1.481 - 0.742 0.739 - - - - - -
68. nrn1b ENSDARG00000042656 44 1.476 - 0.744 - - - - 0.732 - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
69. nceh1a ENSDARG00000020427 35 1.453 - - - - 0.701 - 0.752 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
70. sult1st1 ENSDARG00000028275 806 1.432 - - 0.729 - - 0.703 - - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
71. CR628395.1 ENSDARG00000116298 75 1.423 0.714 - - - - 0.709 - - -
72. myo18ab ENSDARG00000061862 124 0.994 - - - - - - - - 0.994 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
73. si:dkey-246e3.4 ENSDARG00000086390 50 0.994 - - - - - - - - 0.994 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
74. enpp6 ENSDARG00000040469 187 0.994 - - - - - - - - 0.994 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
75. si:ch211-89o5.1 si:ch211-89o5.1 91 0.994 - - - - - - - - 0.994
76. ERAP1_1 ERAP1_1 64 0.994 - - - - - - - - 0.994
77. CABZ01063402.1 CABZ01063402.1 64 0.993 - - - - - - - - 0.993
78. CR388047.3 ENSDARG00000117023 89 0.993 - - - - - - - - 0.993
79. per1b ENSDARG00000012499 320 0.992 - - - - - - - - 0.992 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
80. mpeg1 mpeg1 123 0.992 - - - - - 0.992 - - -
81. FAM83H FAM83H 190 0.991 - - - - - - - - 0.991
82. ACBD3 ENSDARG00000042623 159 0.991 - - - - - - - - 0.991 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
83. rnf165a ENSDARG00000077906 133 0.99 - - - - - - - - 0.990 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
84. casp2 ENSDARG00000062052 559 0.99 - - - - - - - - 0.990 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
85. tp53i11b ENSDARG00000006025 569 0.989 - - - - - - - - 0.989 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
86. calhm2 ENSDARG00000039482 138 0.989 - - - - - - - - 0.989 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
87. MIER3 MIER3 114 0.988 - - - - - - - - 0.988
88. eve1 ENSDARG00000056012 144 0.988 - - - - - - - - 0.988 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
89. trim33l ENSDARG00000086126 241 0.988 - - - - - - - - 0.988 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
90. prmt10 prmt10 312 0.988 - - - - - - - - 0.988
91. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.988 - - - - - - - - 0.988 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
92. cd36 ENSDARG00000032639 288 0.987 - - - - - - - - 0.987 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
93. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.987 - - - - - - - - 0.987 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
94. zgc:153151 ENSDARG00000069563 126 0.987 - - - - - - - - 0.987 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
95. si:ch211-195h23.3 ENSDARG00000068431 322 0.987 - - - - - - - - 0.987 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
96. TPMT TPMT 138 0.986 - - - - - - - - 0.986
97. MAP1S MAP1S 123 0.986 - - - - - - - - 0.986
98. asb13b ENSDARG00000089833 251 0.986 - - - - - - - - 0.986 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
99. cadpsa ENSDARG00000043661 160 0.985 - - - - - - - - 0.985 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
100. gba2 ENSDARG00000061472 171 0.985 - - - - - - - - 0.985 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]

There are 1832 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA