Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrp1ba

Gene Name Gene ID Reads Annotation
lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]










Genes with expression patterns similar to lrp1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 3 1.000 - - - 1.000 - - - 1.000 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
2. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 2 1.000 - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
3. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - 1.000 - - - -
4. BIN1 BIN1 11 2 1.000 - - - 1.000 - - - -
5. CU570981.1 CU570981.1 9 1.977 - - - - 1.000 - - - 0.977
6. mlxip ENSDARG00000059474 12 1.942 - - - - 1.000 - - - 0.942 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
7. SCARB2 SCARB2 24 1.932 1.000 - - - - - - - 0.932
8. ATP9A ENSDARG00000115869 9 1.897 - - - - 0.908 - - - 0.989 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
9. UNC80 ENSDARG00000098290 2 1.881 - - - - 1.000 - - - 0.881 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
10. gnai3 ENSDARG00000030644 29 1.877 1.000 - - - 0.877 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
11. si:ch211-187f22.2 si:ch211-187f22.2 7 1.876 1.000 - - - - - - - 0.876
12. ddrgk1 ENSDARG00000037172 14 1.876 1.000 - - - - - - - 0.876 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
13. EVI5L ENSDARG00000052766 8 1.866 1.000 - - - - - - - 0.866 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
14. CR936465.1 CR936465.1 7 1.787 1.000 - - - 0.787 - - - -
15. CR942805.3 CR942805.3 7 1.787 1.000 - - - 0.787 - - - -
16. znf652 ENSDARG00000062302 17 1.756 1.000 - - - - - - - 0.756 zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
17. kcnk10b ENSDARG00000045956 43 1.748 1.000 - - - - - - - 0.748 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. BEND2_1 BEND2_1 45 1.741 1.000 - - - 0.741 - - - -
19. si:rp71-1k13.5 si:rp71-1k13.5 2 1.714 - - - - 0.755 - - - 0.959
20. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
21. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
22. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
23. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
24. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
25. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
26. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
27. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
28. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
29. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
30. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
31. CABZ01070631.1 ENSDARG00000110183 6 1 1.000 - - - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
32. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
33. VDAC3 ENSDARG00000003695 34 1 1.000 - - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
34. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
35. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
36. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
37. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
38. MPP4 MPP4 1 1 1.000 - - - - - - - -
39. lrguk ENSDARG00000069698 5 1 1.000 - - - - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
40. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
41. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
42. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
43. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
44. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
45. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
46. U1_18 U1_18 0 1 - - - - 1.000 - - - -
47. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
48. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
49. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
50. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
51. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
52. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
53. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
54. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
55. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
56. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
57. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
58. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
59. nrl ENSDARG00000100466 41 1 1.000 - - - - - - - - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
60. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
61. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
62. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
63. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
64. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
65. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
66. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
67. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
68. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
69. ODF2 ODF2 6 1 - - - - 1.000 - - - -
70. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
71. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
72. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
73. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
74. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
75. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
76. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
77. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
78. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
79. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
80. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
81. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
82. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
83. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
84. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
85. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
86. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
87. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
88. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
89. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
90. QDPR QDPR 11 1 1.000 - - - - - - - -
91. U1_29 U1_29 0 1 1.000 - - - - - - - -
92. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
93. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
94. FBF1 FBF1 13 1 1.000 - - - - - - - -
95. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
96. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
97. exoc4 ENSDARG00000004336 32 1 1.000 - - - - - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
98. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
99. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
100. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -

There are 460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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