Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp1ba

Gene Name Gene ID Reads Annotation
lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]










Genes with expression patterns similar to lrp1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 3 1.000 - - - 1.000 - - - 1.000 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
2. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 2 1.000 - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
3. BIN1 BIN1 11 2 1.000 - - - 1.000 - - - -
4. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - 1.000 - - - -
5. CU570981.1 CU570981.1 9 1.977 - - - - 1.000 - - - 0.977
6. mlxip ENSDARG00000059474 12 1.942 - - - - 1.000 - - - 0.942 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
7. SCARB2 SCARB2 24 1.932 1.000 - - - - - - - 0.932
8. ATP9A ENSDARG00000115869 9 1.897 - - - - 0.908 - - - 0.989 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
9. UNC80 ENSDARG00000098290 2 1.881 - - - - 1.000 - - - 0.881 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
10. gnai3 ENSDARG00000030644 29 1.877 1.000 - - - 0.877 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
11. si:ch211-187f22.2 si:ch211-187f22.2 7 1.876 1.000 - - - - - - - 0.876
12. ddrgk1 ENSDARG00000037172 14 1.876 1.000 - - - - - - - 0.876 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
13. EVI5L ENSDARG00000052766 8 1.866 1.000 - - - - - - - 0.866 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
14. CR942805.3 CR942805.3 7 1.787 1.000 - - - 0.787 - - - -
15. CR936465.1 CR936465.1 7 1.787 1.000 - - - 0.787 - - - -
16. znf652 ENSDARG00000062302 17 1.756 1.000 - - - - - - - 0.756 zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
17. kcnk10b ENSDARG00000045956 43 1.748 1.000 - - - - - - - 0.748 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. BEND2_1 BEND2_1 45 1.741 1.000 - - - 0.741 - - - -
19. si:rp71-1k13.5 si:rp71-1k13.5 2 1.714 - - - - 0.755 - - - 0.959
20. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
21. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
22. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
23. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
24. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
25. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
26. si:ch211-244b2.4 ENSDARG00000045530 32 1 1.000 - - - - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
27. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
28. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
29. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
30. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
31. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
32. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
33. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
34. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
35. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
36. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
37. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
38. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
39. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
40. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
41. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
42. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
43. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
44. mxc ENSDARG00000024789 68 1 1.000 - - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
45. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
46. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
47. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
48. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
49. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
50. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
51. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
52. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
53. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
54. TMEM57 TMEM57 260 1 1.000 - - - - - - - -
55. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
56. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
57. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
58. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
59. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
60. CST7 CST7 22 1 - - - - 1.000 - - - -
61. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
62. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
63. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
64. shisa9 shisa9 35 1 1.000 - - - - - - - -
65. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
66. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
67. zfpm2a ENSDARG00000040123 46 1 1.000 - - - - - - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
68. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
69. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
70. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
71. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
72. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
73. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
74. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
75. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
76. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
77. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
78. lppr2a lppr2a 19 1 1.000 - - - - - - - -
79. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
80. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
81. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
82. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
83. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
84. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
85. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
86. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
87. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
88. fastkd1 ENSDARG00000056128 141 1 1.000 - - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
89. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
90. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
91. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
92. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
93. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
94. U5_4 U5_4 1 1 1.000 - - - - - - - -
95. megf11 ENSDARG00000062686 230 1 1.000 - - - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
96. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
97. MIER3 MIER3 114 1 1.000 - - - - - - - -
98. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
99. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
100. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]

There are 460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA