Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp1ba

Gene Name Gene ID Reads Annotation
lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]










Genes with expression patterns similar to lrp1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 3 1.000 - - - 1.000 - - - 1.000 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
2. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - 1.000 - - - -
3. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 2 1.000 - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
4. BIN1 BIN1 11 2 1.000 - - - 1.000 - - - -
5. CU570981.1 CU570981.1 9 1.977 - - - - 1.000 - - - 0.977
6. mlxip ENSDARG00000059474 12 1.942 - - - - 1.000 - - - 0.942 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
7. SCARB2 SCARB2 24 1.932 1.000 - - - - - - - 0.932
8. ATP9A ENSDARG00000115869 9 1.897 - - - - 0.908 - - - 0.989 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
9. UNC80 ENSDARG00000098290 2 1.881 - - - - 1.000 - - - 0.881 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
10. gnai3 ENSDARG00000030644 29 1.877 1.000 - - - 0.877 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
11. si:ch211-187f22.2 si:ch211-187f22.2 7 1.876 1.000 - - - - - - - 0.876
12. ddrgk1 ENSDARG00000037172 14 1.876 1.000 - - - - - - - 0.876 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
13. EVI5L ENSDARG00000052766 8 1.866 1.000 - - - - - - - 0.866 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
14. CR942805.3 CR942805.3 7 1.787 1.000 - - - 0.787 - - - -
15. CR936465.1 CR936465.1 7 1.787 1.000 - - - 0.787 - - - -
16. znf652 ENSDARG00000062302 17 1.756 1.000 - - - - - - - 0.756 zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
17. kcnk10b ENSDARG00000045956 43 1.748 1.000 - - - - - - - 0.748 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. BEND2_1 BEND2_1 45 1.741 1.000 - - - 0.741 - - - -
19. si:rp71-1k13.5 si:rp71-1k13.5 2 1.714 - - - - 0.755 - - - 0.959
20. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
21. CR356223.4 CR356223.4 42 1 1.000 - - - - - - - -
22. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
23. dnajb4 ENSDARG00000038978 56 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-192]
24. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
25. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
26. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
27. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
28. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
29. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
30. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
31. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
32. si:ch211-244b2.4 ENSDARG00000045530 32 1 1.000 - - - - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
33. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
34. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
35. exoc4 ENSDARG00000004336 32 1 1.000 - - - - - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
36. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
37. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
38. uts1 ENSDARG00000014927 35 1 1.000 - - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
39. fkbp5 ENSDARG00000028396 20 1 1.000 - - - - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
40. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
41. si:ch211-113a14.15_2 37 1 1.000 - - - - - - - - si:ch211-113a14.15
42. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
43. CU424462.2 CU424462.2 73 1 1.000 - - - - - - - -
44. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
45. si:dkey-47k20.6 si:dkey-47k20.6 2 1 1.000 - - - - - - - -
46. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
47. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
48. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
49. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
50. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
51. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
52. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
53. syt8 syt8 82 1 1.000 - - - - - - - -
54. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
55. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
56. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
57. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
58. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
59. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
60. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
61. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
62. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
63. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
64. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
65. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
66. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
67. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
68. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
69. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
70. slc25a37 ENSDARG00000073743 31 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
71. QDPR QDPR 11 1 1.000 - - - - - - - -
72. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
73. vsx2 ENSDARG00000005574 102 1 1.000 - - - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
74. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
75. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 1.000 - - - - - - - -
76. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
77. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
78. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
79. BX927369.1 ENSDARG00000105047 21 1 1.000 - - - - - - - -
80. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
81. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
82. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
83. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
84. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
85. MOB2 MOB2 4 1 - - - - 1.000 - - - -
86. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
87. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
88. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
89. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
90. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
91. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
92. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
93. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
94. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
95. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
96. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
97. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
98. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
99. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
100. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]

There are 460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA