Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp1ba

Gene Name Gene ID Reads Annotation
lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]










Genes with expression patterns similar to lrp1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 3 1.000 - - - 1.000 - - - 1.000 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
2. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - 1.000 - - - -
3. BIN1 BIN1 11 2 1.000 - - - 1.000 - - - -
4. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 2 1.000 - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
5. CU570981.1 CU570981.1 9 1.977 - - - - 1.000 - - - 0.977
6. mlxip ENSDARG00000059474 12 1.942 - - - - 1.000 - - - 0.942 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
7. SCARB2 SCARB2 24 1.932 1.000 - - - - - - - 0.932
8. ATP9A ENSDARG00000115869 9 1.897 - - - - 0.908 - - - 0.989 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
9. UNC80 ENSDARG00000098290 2 1.881 - - - - 1.000 - - - 0.881 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
10. gnai3 ENSDARG00000030644 29 1.877 1.000 - - - 0.877 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
11. ddrgk1 ENSDARG00000037172 14 1.876 1.000 - - - - - - - 0.876 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
12. si:ch211-187f22.2 si:ch211-187f22.2 7 1.876 1.000 - - - - - - - 0.876
13. EVI5L ENSDARG00000052766 8 1.866 1.000 - - - - - - - 0.866 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
14. CR936465.1 CR936465.1 7 1.787 1.000 - - - 0.787 - - - -
15. CR942805.3 CR942805.3 7 1.787 1.000 - - - 0.787 - - - -
16. znf652 ENSDARG00000062302 17 1.756 1.000 - - - - - - - 0.756 zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
17. kcnk10b ENSDARG00000045956 43 1.748 1.000 - - - - - - - 0.748 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. BEND2_1 BEND2_1 45 1.741 1.000 - - - 0.741 - - - -
19. si:rp71-1k13.5 si:rp71-1k13.5 2 1.714 - - - - 0.755 - - - 0.959
20. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
21. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
22. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
23. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
24. F13A1 F13A1 1 1 - - - - 1.000 - - - -
25. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
26. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
27. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
28. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
29. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
30. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
31. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
32. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
33. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
34. syt8 syt8 82 1 1.000 - - - - - - - -
35. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
36. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
37. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 1.000 - - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
38. si:dkey-47k20.6 si:dkey-47k20.6 2 1 1.000 - - - - - - - -
39. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
40. MOB2 MOB2 4 1 - - - - 1.000 - - - -
41. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
42. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
43. U1_15 U1_15 1 1 - - - - 1.000 - - - -
44. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
45. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
46. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
47. si:ch211-113a14.15_2 37 1 1.000 - - - - - - - - si:ch211-113a14.15
48. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
49. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
50. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
51. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
52. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
53. dnajb4 ENSDARG00000038978 56 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-192]
54. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
55. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
56. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
57. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
58. wisp1a ENSDARG00000054331 26 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
59. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
60. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
61. slc44a5a ENSDARG00000017398 5 1 1.000 - - - - - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
62. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
63. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
64. U8 U8 11 1 - - - - 1.000 - - - -
65. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
66. rx3 ENSDARG00000052893 43 1 1.000 - - - - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
67. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
68. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
69. si:dkey-188p4.1 si:dkey-188p4.1 1 1 1.000 - - - - - - - -
70. si:dkey-35m8.1 ENSDARG00000094587 0 1 1.000 - - - - - - - - si:dkey-35m8.1 [Source:ZFIN;Acc:ZDB-GENE-060526-296]
71. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
72. mir138 19 1 1.000 - - - - - - - - microRNA 138
73. gfra2b ENSDARG00000044015 5 1 1.000 - - - - - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
74. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
75. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
76. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
77. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
78. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
79. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
80. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
81. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
82. si:ch211-238e22.2 ENSDARG00000112450 23 1 1.000 - - - - - - - - si:ch211-238e22.2 [Source:ZFIN;Acc:ZDB-GENE-041210-346]
83. CCDC74B CCDC74B 8 1 1.000 - - - - - - - -
84. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
85. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
86. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
87. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
88. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
89. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
90. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
91. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
92. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
93. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
94. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
95. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
96. BX664721.1 ENSDARG00000051804 21 1 1.000 - - - - - - - -
97. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
98. CR388013.3 CR388013.3 45 1 1.000 - - - - - - - -
99. APEH ENSDARG00000008703 73 1 1.000 - - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
100. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2

There are 460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA