Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrp12

Gene Name Gene ID Reads Annotation
lrp12 ENSDARG00000098845 999 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]










Genes with expression patterns similar to lrp12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp12 ENSDARG00000098845 999 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
2. eva1ba ENSDARG00000102701 1480 1.952 - - 0.986 - 0.966 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
3. smg5 ENSDARG00000041481 1286 1.918 - - 0.992 - 0.926 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
4. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.912 - - 0.988 - 0.924 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
5. TUBGCP6 1991 1.899 - - - - 0.924 - - - 0.975 tubulin, gamma complex associated protein 6
6. eif3ja ENSDARG00000012603 6324 1.895 - - 0.948 - 0.947 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
7. tm2d3 ENSDARG00000076618 2310 1.877 - - 0.968 - 0.909 - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
8. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.877 - - 0.991 - 0.886 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
9. clybl ENSDARG00000029729 690 1.849 - 0.852 0.997 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
10. cep72 ENSDARG00000105258 344 1.844 - 0.864 - - 0.980 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
11. CLIP4 ENSDARG00000096961 363 1.842 - - 0.997 - - 0.845 - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
12. wdhd1 ENSDARG00000015998 775 1.83 - - 0.994 - - 0.836 - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
13. fut8 fut8 652 1.814 - 0.817 0.997 - - - - - -
14. gdi1 ENSDARG00000056122 4106 1.805 - - 0.971 - 0.834 - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
15. BX571949.1 BX571949.1 293 1.803 - - - - 0.975 - - - 0.828
16. strn3 ENSDARG00000001729 4608 1.798 - - 0.955 - 0.843 - - - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
17. hmgcrb ENSDARG00000105206 2080 1.788 - - 0.984 - - - - - 0.804 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
18. lpl ENSDARG00000087697 2578 1.786 - - 0.953 - 0.833 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
19. ebp ENSDARG00000046098 502 1.786 - - - - 0.973 - - - 0.813 EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
20. dek ENSDARG00000070108 2262 1.785 - - 0.920 - 0.865 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
21. eif4e3 ENSDARG00000005078 1624 1.774 - - 0.988 - - 0.786 - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
22. cped1 ENSDARG00000045747 1024 1.772 - - - - 0.966 - 0.806 - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
23. LPHN2 LPHN2 1971 1.771 - - 0.974 - 0.797 - - - -
24. C2H14orf119 C2H14orf119 716 1.77 - - - - 0.957 - 0.813 - -
25. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.769 - - 0.954 - 0.815 - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
26. wu:fb54a03 wu:fb54a03 1722 1.759 - - - - 0.948 - - - 0.811
27. pank1b ENSDARG00000010098 3202 1.75 - - 0.997 - - - - - 0.753 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
28. ttc3 ENSDARG00000086075 2157 1.747 - - - - 0.940 - - - 0.807 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
29. cwf19l2 ENSDARG00000091760 1372 1.745 - - - - 0.956 0.789 - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
30. ube2t ENSDARG00000063285 716 1.725 - - - - 0.898 - - - 0.827 ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
31. ss18 ENSDARG00000002970 2618 1.708 - - 0.965 - - - - - 0.743 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
32. cbfa2t2 ENSDARG00000074337 4323 1.705 - - 0.965 - - - - - 0.740 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
33. inip ENSDARG00000028523 1925 1.703 - - 0.995 - - 0.708 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
34. sin3ab ENSDARG00000059812 2140 1.684 - - - - 0.933 - 0.751 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
35. kif5bb 1645 1.684 - - 0.916 - - - 0.768 - - kinesin family member 5B, b
36. hcls1 ENSDARG00000012729 1547 1.681 - - - - 0.927 - - - 0.754 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
37. sec24c ENSDARG00000103516 1575 1.676 - - - - 0.919 - 0.757 - - SEC24 homolog C, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-4487]
38. ccne2 ENSDARG00000098529 4695 1.672 - - 0.935 - - - 0.737 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
39. max ENSDARG00000024844 6035 1.669 - - 0.872 - 0.797 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
40. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.666 - - - - 0.939 - - - 0.727 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
41. mybbp1a ENSDARG00000078214 2458 1.66 - - - - 0.929 - 0.731 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
42. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 1.659 0.742 - - - 0.917 - - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
43. pcnp ENSDARG00000037713 2754 1.649 - - 0.917 - - - - - 0.732 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
44. mab21l1 ENSDARG00000102047 4665 1.647 - - - - - 0.799 0.848 - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
45. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.647 - - - - 0.904 0.743 - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
46. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.624 - - - - 0.896 0.728 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
47. prrx1a ENSDARG00000033971 1786 1.617 - - - - 0.862 - - - 0.755 paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
48. wasf3 wasf3 3287 1.616 - - 0.726 - 0.890 - - - -
49. cdh13 ENSDARG00000014215 106 1.615 - 0.895 - - - - 0.720 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
50. rbm39b ENSDARG00000041853 1421 1.61 - - - - 0.889 0.721 - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
51. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.606 - - - - 0.857 - - - 0.749 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
52. leo1 ENSDARG00000055357 1644 1.603 - - - - 0.870 - 0.733 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
53. ctdsp1 ENSDARG00000040674 2828 1.599 - - - - 0.849 - - - 0.750 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
54. gpm6bb ENSDARG00000001676 2005 1.563 - - - - - 0.842 0.721 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
55. PPFIBP1_2 PPFIBP1_2 1274 1.553 - - - - - - 0.735 - 0.818
56. TP53BP1 ENSDARG00000079000 997 1.546 - - - - - - 0.727 - 0.819 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
57. senp3b ENSDARG00000056741 1296 1.545 - - - - - - 0.743 - 0.802 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
58. sh3rf1 ENSDARG00000070470 1463 1.543 - - - - - - 0.753 - 0.790 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
59. si:zfos-2269b6.1 si:zfos-2269b6.1 319 1.54 - - - - - 0.754 0.786 - -
60. tpx2 ENSDARG00000078654 8120 1.54 - - 0.815 - - - - - 0.725 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
61. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.539 - - - - 0.758 - 0.781 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
62. ptbp2a ENSDARG00000101947 1921 1.531 - - - - - - 0.735 - 0.796 polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
63. fam133b ENSDARG00000013863 5070 1.528 - - - - 0.769 - - - 0.759 family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
64. cul4b ENSDARG00000060510 6053 1.519 - - 0.713 - 0.806 - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
65. DTX4 ENSDARG00000076302 2642 1.516 - - 0.728 - 0.788 - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
66. TNPO2 ENSDARG00000042887 2290 1.509 - - - - 0.762 - 0.747 - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
67. kcnh7 ENSDARG00000062687 172 1.498 - - - - - 0.738 0.760 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
68. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.481 - - 0.781 - 0.700 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
69. snoU83B snoU83B 4666 1.474 - - - - 0.769 - - - 0.705
70. adrb3a ENSDARG00000053646 354 1.469 - 0.725 - - - - 0.744 - - adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
71. trim47 ENSDARG00000056678 641 1.465 - 0.725 - - - - 0.740 - - tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]
72. nkrf ENSDARG00000100536 1873 1.461 - - - - - 0.752 0.709 - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
73. KIAA0355 3250 1.452 - - - - 0.740 - - - 0.712 KIAA0355 ortholog, transcript variant X1
74. TMEM97 ENSDARG00000040553 530 1.443 - - - - - 0.709 0.734 - - transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
75. si:ch211-236g6.1 ENSDARG00000071590 28 1 - 1.000 - - - - - - - si:ch211-236g6.1 [Source:ZFIN;Acc:ZDB-GENE-050208-448]
76. CU633991.1 CU633991.1 16 1 - 1.000 - - - - - - -
77. sema3fa ENSDARG00000011163 759 0.999 - - 0.999 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
78. SNX19 SNX19 350 0.999 - - 0.999 - - - - - -
79. pycr1 pycr1 1258 0.999 - - 0.999 - - - - - -
80. mfsd4a mfsd4a 179 0.999 - - 0.999 - - - - - -
81. zgc:171673 ENSDARG00000102473 256 0.999 - - 0.999 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
82. gata1b ENSDARG00000059130 151 0.999 - - 0.999 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
83. U1_25 U1_25 283 0.999 - - 0.999 - - - - - -
84. pld1b ENSDARG00000057125 325 0.999 - - 0.999 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
85. f2rl1.2 ENSDARG00000077540 822 0.999 - - 0.999 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
86. DNAJC16 ENSDARG00000059699 507 0.998 - - 0.998 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
87. lipt1 ENSDARG00000025233 385 0.998 - - 0.998 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
88. dyrk1ab ENSDARG00000023814 1769 0.998 - - 0.998 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
89. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.998 - - 0.998 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
90. RAB39B RAB39B 482 0.998 - - 0.998 - - - - - -
91. si:dkey-176f19.6 si:dkey-176f19.6 373 0.998 - - 0.998 - - - - - -
92. vipas39 ENSDARG00000103690 280 0.998 - - 0.998 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
93. nrg1 ENSDARG00000104314 1081 0.998 - - 0.998 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
94. PPP1R16B ENSDARG00000079860 390 0.998 - - 0.998 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
95. zgc:113227 ENSDARG00000058874 266 0.998 - - 0.998 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
96. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.998 - - 0.998 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
97. pkib ENSDARG00000053110 527 0.998 - - 0.998 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
98. PATZ1 ENSDARG00000076584 1116 0.997 - - 0.997 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
99. CU467832.1 CU467832.1 635 0.997 - - 0.997 - - - - - -
100. hemk1 ENSDARG00000078894 397 0.996 - - 0.996 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]

There are 1471 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA