Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrit1b

Gene Name Gene ID Reads Annotation
lrit1b ENSDARG00000099406 12 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]










Genes with expression patterns similar to lrit1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrit1b ENSDARG00000099406 12 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
2. cttnbp2nl cttnbp2nl 166 1.957 - - - - - - 1.000 - 0.957
3. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1.935 - - - - - - 1.000 - 0.935 zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
4. TULP1 TULP1 50 1.898 - - 0.898 - - - 1.000 - -
5. UNC119 UNC119 104 1.893 - - - 0.893 - - 1.000 - -
6. BX324003.3 BX324003.3 1 1.884 - - - 0.893 - - - - 0.991
7. VDAC3 ENSDARG00000003695 34 1.884 - - - - 0.884 - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
8. GMNC ENSDARG00000068719 28 1.816 - - - - - - 1.000 - 0.816 geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
9. si:ch211-165l15.1 si:ch211-165l15.1 10 1.798 - - - - 0.798 - 1.000 - -
10. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1.786 - - - 0.893 - - - - 0.893 si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
11. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1.781 - - - - - - 1.000 - 0.781 patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
12. CU633991.1 CU633991.1 16 1.77 - - - - - - 1.000 - 0.770
13. RBBP6_9 RBBP6_9 1 1.755 - - - - 0.755 - 1.000 - -
14. st6galnac1.2 ENSDARG00000043816 51 1.715 - - - - 0.715 - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
15. trim105 ENSDARG00000099885 9 1.705 - - 0.705 1.000 - - - - - tripartite motif containing 105 [Source:ZFIN;Acc:ZDB-GENE-060810-140]
16. CT583679.2 CT583679.2 10 1.652 - - - 0.893 - - 0.759 - -
17. si:dkey-29b11.3 ENSDARG00000087388 29 1.638 - - - 0.893 - - 0.745 - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
18. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1.614 - - - 0.893 - - - 0.721 - zgc:112234 [Source:NCBI gene;Acc:554097]
19. CABZ01015787.1 CABZ01015787.1 6 1.532 - - - - 0.815 - - - 0.717
20. CABZ01071058.1 CABZ01071058.1 4 1.521 - - - - 0.715 - - - 0.806
21. si:ch211-229i14.2 ENSDARG00000086048 19 1.487 - - - - - - - 0.711 0.776 si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
22. CU302436.2 CU302436.2 587 1.479 - - - 0.734 - - 0.745 - -
23. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
24. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
25. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
26. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
27. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
28. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
29. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
30. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
31. tmem178 ENSDARG00000020758 77 1 - - - - - - 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
32. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
33. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
34. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
35. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
36. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
37. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
38. BX640584.1 ENSDARG00000100855 1 1 - - - - - - 1.000 - -
39. U6_18 U6_18 12 1 - - - - - - 1.000 - -
40. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
41. zgc:110249 ENSDARG00000035221 68 1 - - - - - - 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
42. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - - - - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
43. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
44. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - 1.000 - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
45. RNF122 RNF122 29 1 - - - - - - 1.000 - -
46. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
47. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
48. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
49. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
50. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
51. CU367845.1_1 CU367845.1_1 43 1 - - - - - - 1.000 - -
52. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
53. CU652893.1 ENSDARG00000104131 3 1 - - - - - - 1.000 - -
54. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
55. DGKA DGKA 8 1 - - - - - - 1.000 - -
56. si:dkey-267i17.3 si:dkey-267i17.3 4 1 - - - - - - 1.000 - -
57. si:dkey-66g10.2 ENSDARG00000092845 28 1 - - - - - - 1.000 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
58. TRIM14_5 TRIM14_5 2 1 - - - - - - 1.000 - -
59. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
60. upp2 ENSDARG00000036833 1 1 - - - - - - 1.000 - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
61. BX537350.1 BX537350.1 8 1 - - - - - - 1.000 - -
62. ifit2 ifit2 11 1 - - - - - - 1.000 - -
63. CABZ01038329.1 CABZ01038329.1 8 1 - - - - - - 1.000 - -
64. CU633479.6 ENSDARG00000116146 4 1 - - - - - - 1.000 - -
65. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
66. sinup ENSDARG00000017163 5 1 - - - - - - 1.000 - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
67. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
68. col17a1a ENSDARG00000069415 52 1 - - - - - - 1.000 - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
69. cdc25d ENSDARG00000075599 7 1 - - - - - - 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
70. mfsd6l ENSDARG00000014761 60 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
71. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
72. CABZ01085054.1 CABZ01085054.1 20 1 - - - - - - 1.000 - -
73. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
74. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
75. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
76. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
77. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
78. CABZ01080074.1 ENSDARG00000076371 0 1 - - - - - - 1.000 - - shroom family member 2b [Source:NCBI gene;Acc:556551]
79. rictora ENSDARG00000100867 20 1 - - - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
80. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
81. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
82. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - 1.000 - -
83. BX255969.1 BX255969.1 16 1 - - - - - - 1.000 - -
84. stx17 ENSDARG00000006869 24 1 - - - - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
85. inpp5ja ENSDARG00000078542 0 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase Ja [Source:ZFIN;Acc:ZDB-GENE-091117-4]
86. si:ch211-219a15.4 ENSDARG00000068951 3 1 - - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
87. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - 1.000 - -
88. Telomerase-vert Telomerase-vert 8 1 - - - - - - 1.000 - -
89. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
90. mocs1 ENSDARG00000078479 1 1 - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
91. BX088653.4 BX088653.4 0 1 - - - - - - 1.000 - -
92. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
93. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
94. fam154b fam154b 2 1 - - - - - - 1.000 - -
95. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
96. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
97. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
98. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
99. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
100. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]

There are 650 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA