Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrch4

Gene Name Gene ID Reads Annotation
lrch4 ENSDARG00000068258 24 leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]










Genes with expression patterns similar to lrch4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrch4 ENSDARG00000068258 24 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
2. fam178a fam178a 29 2.567 - - 0.818 - - 0.749 1.000 - -
3. IQCG ENSDARG00000068678 77 2.539 - 0.848 0.857 - 0.834 - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
4. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 2 1.000 - - - - - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
5. CR936967.1 CR936967.1 2 2 1.000 - - - - - - 1.000 -
6. si:dkeyp-53d3.3 ENSDARG00000098664 65 2 1.000 1.000 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
7. BX572619.4 BX572619.4 10 1.999 - - - - 0.999 - - 1.000 -
8. si:dkey-51d8.6 ENSDARG00000090769 17 1.997 - - - 1.000 0.997 - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
9. CABZ01041804.1 CABZ01041804.1 312 1.967 1.000 - 0.967 - - - - - -
10. si:dkey-150k17.3 33 1.962 1.000 0.962 - - - - - - - si:dkey-150k17.3
11. cadm1b ENSDARG00000042677 277 1.937 - 1.000 - - 0.937 - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
12. cyp2ae1 ENSDARG00000013524 14 1.896 - - 0.961 - 0.935 - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
13. CR848664.1 CR848664.1 12 1.889 - - - 0.889 - - - 1.000 -
14. dync1i2b ENSDARG00000103195 46 1.888 1.000 0.888 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
15. serpinb1l2 ENSDARG00000070396 37 1.881 - - 0.961 - 0.920 - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
16. CMA1_8 CMA1_8 10 1.852 - 1.000 - - - - 0.852 - -
17. THBS1 THBS1 6 1.851 - - - - 0.999 - 0.852 - -
18. si:dkey-88j15.5 si:dkey-88j15.5 48 1.84 - - - 1.000 - 0.840 - - -
19. CR352265.1 ENSDARG00000062758 39 1.81 0.927 - - - - - - 0.883 -
20. stx11a ENSDARG00000044039 39 1.807 - 1.000 - - - 0.807 - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
21. morn2 ENSDARG00000071360 44 1.784 - - - - 0.959 0.825 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
22. zgc:92218 zgc:92218 64 1.783 - 0.963 0.820 - - - - - -
23. ndufaf1 ENSDARG00000025549 42 1.778 - - 0.874 - - - 0.904 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
24. WDSUB1 ENSDARG00000090418 357 1.775 0.801 - - - 0.974 - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
25. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1.772 - 0.986 - - - - 0.786 - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
26. csdc2b 82 1.769 0.795 0.974 - - - - - - - cold shock domain containing C2, RNA binding b
27. si:dkey-163m14.7 65 1.767 0.927 - 0.840 - - - - - - si:dkey-163m14.7
28. vegfab ENSDARG00000034700 366 1.767 0.791 0.976 - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
29. ulk4 ENSDARG00000004176 85 1.766 - 0.986 - - 0.780 - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
30. si:dkey-274m14.3 si:dkey-274m14.3 7 1.749 1.000 - - - - 0.749 - - -
31. si:dkey-199m13.8 si:dkey-199m13.8 61 1.745 1.000 - 0.745 - - - - - -
32. si:dkey-103d23.5 26 1.74 0.854 - - - 0.886 - - - - si:dkey-103d23.5
33. C20H8orf82 C20H8orf82 91 1.731 0.854 - - - 0.877 - - - -
34. npffr2.1 npffr2.1 60 1.73 1.000 - - - - - 0.730 - -
35. FUT9 FUT9 91 1.729 1.000 - 0.729 - - - - - -
36. FP325123.1 ENSDARG00000105359 246 1.718 - 0.845 - - - 0.873 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
37. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.711 - - 0.925 - - - 0.786 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
38. IKZF4 ENSDARG00000037068 36 1.707 - 1.000 - - - - 0.707 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
39. gcgb ENSDARG00000040907 182 1.706 0.854 - - - - - 0.852 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
40. ube2l3b ENSDARG00000027141 26 1.704 - 0.986 - - 0.718 - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
41. klhl26 ENSDARG00000053876 48 1.701 - 1.000 - - - - 0.701 - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
42. si:ch211-155o21.4 ENSDARG00000096567 25 1.686 - - - 0.810 0.876 - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
43. PLEKHA4 PLEKHA4 86 1.68 - 0.927 - - - - 0.753 - -
44. CR478286.1_1 CR478286.1_1 306 1.672 0.765 0.907 - - - - - - -
45. ubxn10 ENSDARG00000052535 24 1.67 - - 0.921 - - 0.749 - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
46. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 1.65 - 0.939 - - - 0.711 - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
47. myo7aa ENSDARG00000099871 23 1.641 0.927 0.714 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
48. PTGER3 ENSDARG00000055781 187 1.624 0.789 0.835 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
49. zgc:171901 ENSDARG00000074365 129 1.621 - 0.828 0.793 - - - - - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
50. chac2 ENSDARG00000055078 86 1.606 - 0.829 0.777 - - - - - - ChaC, cation transport regulator homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-050706-146]
51. ms4a17a.5 ENSDARG00000092204, ENSDARG00000097527 56 1.603 - 0.761 - - - - - 0.842 - membrane-spanning 4-domains, subfamily A, member 17A.5 [Source:ZFIN;Acc:ZDB-GENE-040912-55]
52. CABZ01045617.2 CABZ01045617.2 13 1.601 - - - - - 0.749 0.852 - -
53. tmem244 ENSDARG00000043847 3 1.601 - - - - - 0.749 0.852 - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
54. ripply1 ENSDARG00000054103 367 1.592 - 0.798 - - 0.794 - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
55. sh2d5 ENSDARG00000014324 228 1.583 - 0.850 0.733 - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
56. ttc23 ENSDARG00000022160 101 1.578 0.780 - 0.798 - - - - - - tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]
57. pfkpb ENSDARG00000012801 223 1.563 0.802 - - - - - 0.761 - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
58. xcr1a xcr1a 3 1.563 - - - 0.711 - - 0.852 - -
59. tmem72 ENSDARG00000069332 19 1.557 - 0.808 - - - 0.749 - - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
60. si:ch211-218c6.9 si:ch211-218c6.9 40 1.527 - - 0.825 - - - - 0.702 -
61. fam211ba fam211ba 202 1.524 - 0.776 0.748 - - - - - -
62. si:ch211-136m16.8 ENSDARG00000090767 91 1.522 - - 0.821 - - - 0.701 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
63. mfsd12a ENSDARG00000061908 68 1.52 - 0.717 0.803 - - - - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
64. si:ch211-208f21.2 ENSDARG00000094177 61 1.503 - 0.771 0.732 - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
65. cldnj ENSDARG00000058880 59 1.497 - - - - 0.777 - - 0.720 - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
66. lpcat4 ENSDARG00000035028 167 1.481 - 0.724 - - - 0.757 - - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
67. penkb ENSDARG00000036045 304 1.475 0.768 - - - - 0.707 - - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
68. C13H2orf50 C13H2orf50 87 1.443 - - 0.743 - 0.700 - - - -
69. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
70. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
71. tmprss4b ENSDARG00000012860 6 1 - - - - - - - 1.000 - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
72. SBSPON ENSDARG00000110160 2 1 - - - - - - - 1.000 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
73. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
74. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
75. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
76. coch ENSDARG00000024032 7 1 - - - - - - - 1.000 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
77. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
78. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
79. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - - 1.000 -
80. lhfpl5a ENSDARG00000045023 2 1 - - - - - - - 1.000 - LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
81. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - - - - - 1.000 -
82. si:ch73-77n15.2 si:ch73-77n15.2 0 1 - - - - - - - 1.000 -
83. CR352328.3 CR352328.3 9 1 - - - - - - - 1.000 -
84. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
85. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
86. cmpk2 ENSDARG00000031359 1 1 - - - - - - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
87. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
88. fem1a ENSDARG00000067966 11 1 - - - - - - - 1.000 - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
89. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
90. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
91. GALNT8_1 GALNT8_1 10 1 - - - - - - - 1.000 -
92. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
93. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
94. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
95. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
96. eif3bb ENSDARG00000074213 2 1 - - - - - - - 1.000 - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
97. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
98. lppr4a lppr4a 141 1 1.000 - - - - - - - -
99. kcng4 kcng4 37 1 1.000 - - - - - - - -
100. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]

There are 1653 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA