Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrch2

Gene Name Gene ID Reads Annotation
lrch2 ENSDARG00000075580, ENSDARG00000116418 255 leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]










Genes with expression patterns similar to lrch2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
2. med14 ENSDARG00000009953 1383 1.877 - 0.893 - - 0.984 - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
3. rem1 ENSDARG00000020544 87 1.837 - 0.837 - - - - 1.000 - - RAS (RAD and GEM)-like GTP-binding 1 [Source:ZFIN;Acc:ZDB-GENE-040317-1]
4. fam134c fam134c 1550 1.808 - 0.830 - - 0.978 - - - -
5. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.778 - - - - 0.998 - 0.780 - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
6. TUSC5_1 TUSC5_1 320 1.769 - - - - 0.998 - 0.771 - -
7. TRAPPC10 ENSDARG00000098118 954 1.761 - 0.767 - - 0.994 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
8. gorab ENSDARG00000042031 483 1.747 - 0.748 - - 0.999 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
9. FP245444.1 FP245444.1 1922 1.723 - - 0.740 - 0.983 - - - -
10. CU929175.1 CU929175.1 200 1.71 0.843 0.867 - - - - - - -
11. TUBB8P7_1 TUBB8P7_1 2722 1.687 - - - - 0.978 - 0.709 - -
12. HTR1E 103 1.663 - 0.818 - - - 0.845 - - - 5-hydroxytryptamine receptor 1E
13. clvs2 ENSDARG00000053122 1390 1.628 - 0.865 - - - - 0.763 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
14. BX004890.2 BX004890.2 84 1.615 - - 0.808 - - - 0.807 - -
15. MICU3_1 MICU3_1 51 1.589 - - - 0.734 - - 0.855 - -
16. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.549 - 0.805 - - - - - - 0.744 ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
17. epha6 ENSDARG00000022971 52 1.538 - 0.832 - - - - - - 0.706 eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
18. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.528 - - 0.752 0.776 - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
19. ptpn5 ENSDARG00000074866 548 1.516 - 0.740 - - - - 0.776 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
20. atp2b1b ENSDARG00000007788 56 1.487 - 0.778 0.709 - - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
21. NLRC5 ENSDARG00000024631 11 1.481 0.718 - - - - 0.763 - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
22. BX664622.1 ENSDARG00000101754 39 1.479 0.718 0.761 - - - - - - -
23. zgc:193801 ENSDARG00000076552 37 1.459 - - 0.709 0.750 - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
24. c1qtnf5 ENSDARG00000056134 729 1.455 - 0.736 0.719 - - - - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
25. si:ch211-214c7.4 ENSDARG00000069595 56 1.442 - 0.721 - - - - - - 0.721 si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
26. si:ch211-222k6.2 ENSDARG00000087046 144 1.438 - - 0.715 0.723 - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
27. BAHD1 ENSDARG00000086789 1194 1.424 - 0.706 - - - - - - 0.718 bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
28. pfkpb ENSDARG00000012801 223 1 - - - - 1.000 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
29. fam193b ENSDARG00000102831 442 1 - - - - 1.000 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
30. kcna1 kcna1 174 1 - - - - - - 1.000 - -
31. dopey1 438 0.999 - - - - 0.999 - - - - dopey family member 1, transcript variant X4
32. ercc6 ENSDARG00000075612 1175 0.999 - - - - 0.999 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
33. slc2a15b ENSDARG00000053269 899 0.999 - - - - 0.999 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
34. ccr10 ENSDARG00000040643 255 0.999 - - - - 0.999 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
35. ccdc28b ENSDARG00000011222 528 0.999 - - - - 0.999 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
36. myl2b ENSDARG00000053424 226 0.999 - - - - 0.999 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
37. nefma ENSDARG00000021351 790 0.999 - - - - 0.999 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
38. lig4 ENSDARG00000060620 369 0.999 - - - - 0.999 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
39. FOXL2 239 0.999 - - - - 0.999 - - - - forkhead box L2, transcript variant X1
40. ago4 ENSDARG00000100854 496 0.998 - - - - 0.998 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
41. atxn7l3 ENSDARG00000029331 531 0.998 - - - - 0.998 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
42. cuedc2 ENSDARG00000039365 484 0.998 - - - - 0.998 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
43. med13b ENSDARG00000003910 1143 0.998 - - - - 0.998 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
44. spag7 ENSDARG00000011555 3224 0.998 - - - - 0.998 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
45. tab1 ENSDARG00000036613 445 0.997 - - - - 0.997 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
46. bloc1s3 ENSDARG00000068828 502 0.997 - - - - 0.997 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
47. fut8 fut8 652 0.997 - - - - 0.997 - - - -
48. BX005008.2 BX005008.2 708 0.997 - - - - 0.997 - - - -
49. lgi1a ENSDARG00000020493 1218 0.997 - - - - 0.997 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
50. CR759921.2 CR759921.2 583 0.997 - - - - 0.997 - - - -
51. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.996 - - - - 0.996 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
52. clu ENSDARG00000010434 498 0.996 - - - - 0.996 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
53. tmem88a ENSDARG00000056920 536 0.996 - - - - 0.996 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
54. mnat1 ENSDARG00000002077 287 0.996 - - - - 0.996 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
55. cenpi ENSDARG00000052565 482 0.996 - - - - 0.996 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
56. aspg ENSDARG00000052942 1406 0.996 - - - - 0.996 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
57. smurf1 ENSDARG00000016086 878 0.996 - - - - 0.996 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
58. larp7 ENSDARG00000017315 1194 0.996 - - - - 0.996 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
59. exoc3l4 ENSDARG00000058180 923 0.996 - - - - 0.996 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
60. msxe msxe 362 0.995 - - - - 0.995 - - - -
61. aldh16a1 ENSDARG00000037935 617 0.995 - - - - 0.995 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
62. wdr24 ENSDARG00000025507 505 0.995 - - - - 0.995 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
63. pip5k1bb ENSDARG00000006508 2812 0.995 - - - - 0.995 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
64. si:dkey-20j1.4 si:dkey-20j1.4 406 0.995 - - - - 0.995 - - - -
65. toporsb ENSDARG00000105028 1898 0.995 - - - - 0.995 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
66. si:ch211-150o23.2 ENSDARG00000092746 788 0.994 - - - - 0.994 - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
67. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.994 - - - - 0.994 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
68. MANBAL ENSDARG00000059853 636 0.994 - - - - 0.994 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
69. usp16 ENSDARG00000060633 684 0.994 - - - - 0.994 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
70. bmi1a ENSDARG00000006010 2061 0.994 - - - - 0.994 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
71. hey2 ENSDARG00000013441 540 0.994 - - - - 0.994 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
72. katnbl1 ENSDARG00000042522 1086 0.993 - - - - 0.993 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
73. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.993 - - - - 0.993 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
74. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.993 - - - - 0.993 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
75. prdm16 prdm16 1346 0.993 - - - - 0.993 - - - -
76. ypel5 ENSDARG00000088929 1011 0.993 - - - - 0.993 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
77. larp4b ENSDARG00000062146 1601 0.992 - - - - 0.992 - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
78. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.992 - - - - 0.992 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
79. FBXO33 ENSDARG00000075400 1164 0.992 - - - - 0.992 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
80. pdpk1b ENSDARG00000018285 957 0.992 - - - - 0.992 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
81. dvl3a ENSDARG00000015707 1132 0.992 - - - - 0.992 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
82. st8sia6 ENSDARG00000021195 2244 0.992 - - - - 0.992 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
83. hvcn1 ENSDARG00000040338 571 0.992 - - - - 0.992 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
84. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.992 - - - - 0.992 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
85. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.991 - - - - 0.991 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
86. sin3b ENSDARG00000062472 2025 0.991 - - - - 0.991 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
87. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.991 - - - - 0.991 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
88. brd9 ENSDARG00000017143 936 0.991 - - - - 0.991 - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
89. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.991 - - - - 0.991 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
90. odz4 odz4 822 0.99 - - - - 0.990 - - - -
91. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.99 - - - - 0.990 - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
92. atp2a2a ENSDARG00000029439 940 0.989 - - - - 0.989 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
93. cnep1r1 ENSDARG00000036064 1440 0.989 - - - - 0.989 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
94. rca2.1 ENSDARG00000056075 3410 0.989 - - - - 0.989 - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
95. GRAMD4 GRAMD4 1967 0.989 - - - - 0.989 - - - -
96. smn1 ENSDARG00000018494 1024 0.989 - - - - 0.989 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
97. tbl1x ENSDARG00000060438 1386 0.988 - - - - 0.988 - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
98. SENP1 SENP1 1122 0.988 - - - - 0.988 - - - -
99. eng1b eng1b 2544 0.988 - - - - 0.988 - - - -
100. hccs hccs 1758 0.988 - - - - 0.988 - - - -

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA