Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for loxl3b

Gene Name Gene ID Reads Annotation
loxl3b ENSDARG00000039563 1657 lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]










Genes with expression patterns similar to loxl3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. loxl3b ENSDARG00000039563 1657 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
2. PAQR4 PAQR4 2150 2.412 0.914 0.750 - - - 0.748 - - -
3. col9a3 ENSDARG00000037845 6564 2.296 0.799 0.783 - - - 0.714 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
4. sptb ENSDARG00000030490 7128 2.133 0.715 0.713 - - - 0.705 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
5. cmn ENSDARG00000055527 14039 1.767 0.811 - - - - - 0.956 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
6. NRD1 NRD1 3486 1.719 - - - - - 0.719 1.000 - -
7. pgam2 ENSDARG00000057571 23387 1.719 0.750 - - - - - 0.969 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
8. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.71 - - - - - 0.711 0.999 - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
9. CR450814.3 CR450814.3 608 1.702 0.883 - - - - 0.819 - - -
10. sox9b ENSDARG00000043923 5375 1.701 - 0.710 - - - - 0.991 - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
11. CABZ01044297.1 CABZ01044297.1 2015 1.689 0.907 0.782 - - - - - - -
12. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 1.687 - - - - - 0.721 0.966 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
13. ntla ntla 926 1.676 0.919 0.757 - - - - - - -
14. artnb ENSDARG00000093714 107 1.647 0.919 0.728 - - - - - - - artemin b [Source:ZFIN;Acc:ZDB-GENE-070705-129]
15. CR392006.1 CR392006.1 1401 1.616 0.852 - - - - 0.764 - - -
16. sox5 ENSDARG00000011582 3632 1.611 0.803 0.808 - - - - - - - SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
17. epyc ENSDARG00000056950 7783 1.602 0.847 0.755 - - - - - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
18. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.592 0.862 0.730 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
19. tgm2l ENSDARG00000093381 218 1.583 0.867 - - - - 0.716 - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
20. tgfbi ENSDARG00000071586 17779 1.58 0.806 - - - - 0.774 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
21. col11a2 ENSDARG00000012422 3204 1.554 0.796 0.758 - - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
22. plod2 ENSDARG00000011821 1656 1.549 0.826 - - - - 0.723 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
23. BX322608.1 ENSDARG00000111690 326 1.544 0.830 0.714 - - - - - - -
24. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.535 0.782 0.753 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
25. cped1 ENSDARG00000045747 1024 1.531 0.818 - - - - - - - 0.713 cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
26. ryr3 ENSDARG00000071331 6795 1.524 - 0.761 - - - 0.763 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
27. IGSF10 ENSDARG00000077497 317 1.522 0.794 - - - - - - - 0.728 immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
28. C13H10orf71 3489 1.519 0.763 0.756 - - - - - - - chromosome 13 C10orf71 homolog
29. pi15a ENSDARG00000045378 2361 1.505 - 0.751 - - - 0.754 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
30. tnnt2d ENSDARG00000002988 7590 1.491 0.714 0.777 - - - - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
31. chad ENSDARG00000045071 903 1.49 0.733 - - - - 0.757 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
32. NRAP ENSDARG00000009341 3565 1.49 - 0.784 - - - 0.706 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
33. CU633479.5 ENSDARG00000114818 1815 1.489 0.766 0.723 - - - - - - -
34. MUSTN1 MUSTN1 1882 1.484 0.773 0.711 - - - - - - -
35. CU468924.1 CU468924.1 544 1.482 0.764 - - - - 0.718 - - -
36. hapln1a ENSDARG00000089769 12334 1.478 0.705 0.773 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
37. smtnl1 ENSDARG00000041257 7410 1.477 0.762 - - - - 0.715 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
38. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.475 - 0.749 - - - 0.726 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
39. ptrfa ptrfa 4363 1.473 0.721 0.752 - - - - - - -
40. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 1.472 0.770 - - - - 0.702 - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
41. SMOC1 ENSDARG00000088255 507 1.467 0.766 - - - - 0.701 - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
42. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 1.461 0.756 - - - - 0.705 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
43. BX323459.1 ENSDARG00000109508 1476 1.45 0.728 - - - - 0.722 - - -
44. si:ch211-253b1.4 si:ch211-253b1.4 261 1.45 0.717 0.733 - - - - - - -
45. ndufa6 ENSDARG00000038028 2653 1.444 - 0.726 - - - 0.718 - - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
46. tgfb3 ENSDARG00000019367 2327 1.443 0.717 - - - - 0.726 - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
47. plcl1 ENSDARG00000067676 2457 1.44 - 0.703 - - - 0.737 - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
48. matn3b ENSDARG00000069265 856 1.438 - 0.700 - - - 0.738 - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
49. trub1 ENSDARG00000053805 202 1.43 - 0.728 - - - - - - 0.702 TruB pseudouridine (psi) synthase family member 1 [Source:ZFIN;Acc:ZDB-GENE-080723-73]
50. kif21a ENSDARG00000061131 913 1.414 - 0.708 - - - 0.706 - - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
51. gpd1a ENSDARG00000043701 1105 1 - - - - - - 1.000 - - glycerol-3-phosphate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-050417-209]
52. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 1 - - - - - - 1.000 - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
53. phf23b ENSDARG00000036305 1073 1 - - - - - - 1.000 - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
54. dnaja1l dnaja1l 1536 1 - - - - - - 1.000 - -
55. cnnm2a ENSDARG00000061195 764 1 - - - - - - 1.000 - - cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
56. pah ENSDARG00000020143 1551 1 - - - - - - 1.000 - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
57. rab32a ENSDARG00000029036 2157 1 - - - - - - 1.000 - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
58. ccdc124 ENSDARG00000043502 2420 1 - - - - - - 1.000 - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
59. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
60. wdr33 ENSDARG00000018272 4076 1 - - - - - - 1.000 - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
61. zgc:65895 ENSDARG00000034086 1258 1 - - - - - - 1.000 - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
62. nf2a ENSDARG00000020204 740 1 - - - - - - 1.000 - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
63. nup133 ENSDARG00000010078 2373 1 - - - - - - 1.000 - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
64. TATDN3 ENSDARG00000044072 914 1 - - - - - - 1.000 - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
65. tbc1d16 ENSDARG00000036994 948 1 - - - - - - 1.000 - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
66. sncb ENSDARG00000104945 8197 1 - - - - - - 1.000 - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
67. ctns ENSDARG00000008890 887 1 - - - - - - 1.000 - - cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
68. gtf2f1 ENSDARG00000032129 3041 1 - - - - - - 1.000 - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
69. yars ENSDARG00000035913, ENSDARG00000113430 2043 1 - - - - - - 1.000 - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
70. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1 - - - - - - 1.000 - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
71. stag2a ENSDARG00000011783 1588 1 - - - - - - 1.000 - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
72. st3gal3a ENSDARG00000015374 2360 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
73. inab ENSDARG00000053248 3239 0.999 - - - - - - 0.999 - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
74. slc25a48 ENSDARG00000021250 1057 0.999 - - - - - - 0.999 - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
75. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 0.999 - - - - - - 0.999 - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
76. samm50 ENSDARG00000045814 4511 0.999 - - - - - - 0.999 - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
77. psmb6 ENSDARG00000002240 8015 0.999 - - - - - - 0.999 - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
78. akap1b ENSDARG00000006062 4214 0.999 - - - - - - 0.999 - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
79. C5H8orf4 C5H8orf4 2740 0.999 - - - - - - 0.999 - -
80. ggcx ENSDARG00000067805 3812 0.999 - - - - - - 0.999 - - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
81. mtch2 ENSDARG00000019732 3948 0.999 - - - - - - 0.999 - - mitochondrial carrier homolog 2 [Source:ZFIN;Acc:ZDB-GENE-991008-9]
82. fam32al fam32al 5716 0.999 - - - - - - 0.999 - -
83. NDUFB1 ENSDARG00000087456 8270 0.998 - - - - - - 0.998 - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
84. ndufs2 ENSDARG00000007526 6516 0.998 - - - - - - 0.998 - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
85. slc13a2 ENSDARG00000053853 1164 0.998 - - - - - - 0.998 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
86. bloc1s6 ENSDARG00000042933 2978 0.998 - - - - - - 0.998 - - biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
87. map2k6 ENSDARG00000099184 8741 0.998 - - - - - - 0.998 - - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
88. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 0.997 - - - - - - 0.997 - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
89. trappc1 ENSDARG00000039005 6990 0.996 - - - - - - 0.996 - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
90. puf60b ENSDARG00000001241 13827 0.995 - - - - - - 0.995 - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
91. ube2d1b ENSDARG00000038576 5971 0.995 - - - - - - 0.995 - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
92. caspb ENSDARG00000052039 4329 0.995 - - - - - - 0.995 - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
93. tpm4a ENSDARG00000023963 10932 0.995 - - - - - - 0.995 - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
94. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.995 - - - - - - 0.995 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
95. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.994 - - - - - - 0.994 - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
96. ola1 ENSDARG00000044565 22424 0.993 - - - - - - 0.993 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
97. etf1 etf1 12861 0.991 - - - - - - 0.991 - -
98. tpd52l2a ENSDARG00000027154 4359 0.991 - - - - - - 0.991 - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
99. nop56 ENSDARG00000012820 15231 0.99 - - - - - - 0.990 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
100. fmodb ENSDARG00000010294 1735 0.99 - - - - - - 0.990 - - fibromodulin b [Source:ZFIN;Acc:ZDB-GENE-080327-28]

There are 540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA