Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for loxl1

Gene Name Gene ID Reads Annotation
loxl1 ENSDARG00000054451 2485 lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]










Genes with expression patterns similar to loxl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. loxl1 ENSDARG00000054451 2485 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
2. col9a2 ENSDARG00000024492 20234 2.419 - - - - 0.712 0.888 0.819 - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
3. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.226 - 0.740 - - - 0.718 0.768 - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
4. CABZ01044297.1 CABZ01044297.1 2015 1.871 - 0.879 - - - 0.992 - - -
5. ENSDARG00000070355 ENSDARG00000070355 8316 1.863 - - - - 0.879 - 0.984 - -
6. PAQR4 PAQR4 2150 1.855 - 0.919 - - - 0.936 - - -
7. irx5a ENSDARG00000034043 1694 1.841 - 0.871 - - 0.970 - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
8. susd5 ENSDARG00000088277 439 1.836 - 0.909 - - - 0.927 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
9. pi15a ENSDARG00000045378 2361 1.82 - 0.877 - - - 0.943 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
10. ntla ntla 926 1.817 - 0.845 - - - 0.972 - - -
11. epyc ENSDARG00000056950 7783 1.806 - 0.827 - - - 0.979 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
12. camk2a ENSDARG00000053617 950 1.783 - 0.793 - - 0.990 - - - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
13. matn3b ENSDARG00000069265 856 1.783 - 0.826 - - - 0.957 - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
14. plcl1 ENSDARG00000067676 2457 1.778 - 0.852 - - - 0.926 - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
15. col9a3 ENSDARG00000037845 6564 1.755 - 0.770 - - - 0.985 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
16. BX842614.2 BX842614.2 799 1.722 - 0.771 - - - 0.951 - - -
17. BX470254.1 ENSDARG00000097402 1389 1.72 - 0.888 - - - 0.832 - - -
18. CU463857.1 CU463857.1 5541 1.719 - - - - - 0.721 0.998 - -
19. foxc1b ENSDARG00000055398 1499 1.709 - 0.728 - - 0.981 - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
20. col27a1a 1747 1.692 - 0.777 - - - 0.915 - - - collagen, type XXVII, alpha 1a
21. tspan7b ENSDARG00000008407 5740 1.683 - - - - 0.980 0.703 - - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
22. ntd5 ENSDARG00000040944 4988 1.681 - 0.771 - - - 0.910 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
23. IGSF10 ENSDARG00000077497 317 1.666 - 0.823 - - - 0.843 - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
24. nkx3.2 ENSDARG00000037639 575 1.662 - 0.811 - - - 0.851 - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
25. mmp23bb ENSDARG00000009825 133 1.652 - 0.753 - - - 0.899 - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
26. plcd4a ENSDARG00000057975 241 1.641 - 0.773 - - - 0.868 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
27. fam46bb 601 1.638 - 0.756 - - - 0.882 - - - family with sequence similarity 46, member Bb
28. CU972452.1 CU972452.1 1046 1.613 - 0.746 - - - 0.867 - - -
29. C12H10orf71 C12H10orf71 595 1.591 - 0.786 - - - 0.805 - - -
30. egf ENSDARG00000052739, ENSDARG00000114581 141 1.589 - 0.787 - - - 0.802 - - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
31. CR450814.3 CR450814.3 608 1.584 - 0.737 - - - 0.847 - - -
32. clu ENSDARG00000010434 498 1.578 - 0.755 - - - 0.823 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
33. loxl5b ENSDARG00000076904 468 1.566 - 0.819 - - - 0.747 - - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
34. STRIP2 ENSDARG00000059003 394 1.557 - 0.850 - - - 0.707 - - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
35. GJD4 ENSDARG00000116895 139 1.555 - 0.730 - - - 0.825 - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
36. CR847510.1 CR847510.1 629 1.553 - 0.701 - - - 0.852 - - -
37. myhc4 ENSDARG00000035438 1322 1.55 - 0.755 - - - 0.795 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
38. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.541 - 0.764 - - - 0.777 - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
39. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.534 - 0.805 - - - 0.729 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
40. BX511021.1 ENSDARG00000073936 647 1.517 - 0.729 - - - 0.788 - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
41. dtnba ENSDARG00000077694 5483 1.509 - 0.723 - - - 0.786 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
42. ryr3 ENSDARG00000071331 6795 1.506 - 0.701 - - - 0.805 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
43. alpk3a ENSDARG00000078989 1992 1.498 - 0.728 - - - 0.770 - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
44. mlf1 ENSDARG00000077301 789 1.484 - 0.772 - - - 0.712 - - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
45. aqp4 ENSDARG00000010565 624 1.476 - 0.712 - - - 0.764 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
46. FRMD5 ENSDARG00000075942 569 1.419 - 0.715 - - - 0.704 - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
47. vwde ENSDARG00000103443 5758 1.419 - 0.705 - - - 0.714 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
48. loxl2a ENSDARG00000044010 1906 1 - - - - - - 1.000 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
49. cth ENSDARG00000074301 3860 1 - - - - - - 1.000 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
50. rbm39a ENSDARG00000011613 4520 1 - - - - - - 1.000 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
51. rgma ENSDARG00000012248 2238 1 - - - - - - 1.000 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
52. cep97 ENSDARG00000102407 1154 0.999 - - - - - - 0.999 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
53. EIF4G1_1 EIF4G1_1 3721 0.999 - - - - - - 0.999 - -
54. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.999 - - - - - - 0.999 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
55. phf2 ENSDARG00000018691 3341 0.999 - - - - - - 0.999 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
56. TUBGCP6 1991 0.999 - - - - - - 0.999 - - tubulin, gamma complex associated protein 6
57. chd2 ENSDARG00000060687 3832 0.999 - - - - - - 0.999 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
58. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
59. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.999 - - - - - - 0.999 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
60. PCDH9 ENSDARG00000063264 1309 0.999 - - - - - - 0.999 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
61. ndufa7 ENSDARG00000036684 6051 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
62. efcab7 ENSDARG00000020279 1030 0.999 - - - - - - 0.999 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
63. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
64. AL772300.3 AL772300.3 1752 0.999 - - - - - - 0.999 - -
65. serpine2 ENSDARG00000029353 2274 0.999 - - - - - - 0.999 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
66. aspg ENSDARG00000052942 1406 0.999 - - - - - - 0.999 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
67. sh3gl3a ENSDARG00000013360 3602 0.999 - - - - - - 0.999 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
68. cmip ENSDARG00000062933 4521 0.999 - - - - - - 0.999 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
69. CT955967.1 ENSDARG00000099956 2885 0.999 - - - - - - 0.999 - -
70. BX548078.1 ENSDARG00000093780 1325 0.999 - - - - - - 0.999 - -
71. stx12 ENSDARG00000098813 2576 0.999 - - - - - - 0.999 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
72. wu:fj08f03 wu:fj08f03 1337 0.999 - - - - - - 0.999 - -
73. parp1 ENSDARG00000019529 6787 0.999 - - - - - - 0.999 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
74. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.999 - - - - - - 0.999 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
75. hoxb8a ENSDARG00000056027 6340 0.998 - - - - - - 0.998 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
76. rab1ba ENSDARG00000058044 5080 0.998 - - - - - - 0.998 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
77. FP102272.1 FP102272.1 9473 0.998 - - - - - - 0.998 - -
78. bin2a ENSDARG00000003219 1369 0.998 - - - - - - 0.998 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
79. slc16a12b ENSDARG00000089885 3744 0.998 - - - - - - 0.998 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
80. rab5aa ENSDARG00000018602 8947 0.998 - - - - - - 0.998 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
81. eif3c ENSDARG00000016443 18003 0.997 - - - - - - 0.997 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
82. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.997 - - - - - - 0.997 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
83. zgc:101000 zgc:101000 9041 0.997 - - - - - - 0.997 - -
84. psmd6 ENSDARG00000070674 4675 0.997 - - - - - - 0.997 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
85. lamc1 ENSDARG00000036279 11025 0.996 - - - - - - 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
86. cx43.4 ENSDARG00000007099 16369 0.996 - - - - - - 0.996 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
87. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.995 - - - - 0.995 - - - -
88. lgals3l lgals3l 3833 0.995 - - - - - - 0.995 - -
89. rnaseka ENSDARG00000069461 10304 0.994 - - - - - - 0.994 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
90. nr2f1a ENSDARG00000052695 5037 0.994 - - - - - - 0.994 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
91. qkia ENSDARG00000097478 18572 0.994 - - - - - - 0.994 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
92. hmgcl ENSDARG00000021220 2468 0.994 - - - - - - 0.994 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
93. matn3a ENSDARG00000069245 2410 0.993 - - - - - 0.993 - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
94. mat2aa ENSDARG00000040334 10769 0.993 - - - - - - 0.993 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
95. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.993 - - - - 0.993 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
96. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.993 - - - - 0.993 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
97. si:dkey-20i20.2 ENSDARG00000071719 659 0.993 - - - - 0.993 - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
98. foxi3a ENSDARG00000055926 749 0.993 - - - - 0.993 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
99. rbx1 ENSDARG00000038030 14611 0.993 - - - - - - 0.993 - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
100. ccdc19 ccdc19 495 0.993 - - - - 0.993 - - - -

There are 716 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA