Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lnx1

Gene Name Gene ID Reads Annotation
lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]










Genes with expression patterns similar to lnx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
2. ef1 1343 3.497 - - 0.773 - - 0.833 0.921 - 0.970 E74-like factor 1 (ets domain transcription factor), transcript variant X4
3. FUCA1 FUCA1 1446 3.234 - 0.730 0.739 - - 0.794 0.971 - -
4. itpkcb ENSDARG00000067741 2370 2.657 - - 0.725 - - - 0.961 - 0.971 inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
5. armc1l ENSDARG00000020887 1219 2.568 - 0.818 - - 0.782 - 0.968 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
6. pof1b ENSDARG00000054060 2355 2.541 0.855 - - - 0.803 - - - 0.883 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
7. ubap2l ENSDARG00000063219 1147 2.532 - 0.769 - - 0.772 - 0.991 - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
8. eefsec ENSDARG00000004696 791 2.458 - 0.726 - - 0.759 - - - 0.973 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
9. CABZ01039859.1 ENSDARG00000076361 540 2.455 0.730 0.865 - - 0.860 - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
10. aldh2.2 ENSDARG00000028087 303 2.401 - - 0.701 - 0.886 0.814 - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
11. arpc4l ENSDARG00000058225 10107 2.374 - - - - - 0.705 0.824 - 0.845 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
12. ch1073-291c23.1 2426 2.279 - 0.734 - - - 0.770 - - 0.775 ch1073-291c23.1, transcript variant X6
13. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.929 - - - - - - 0.963 - 0.966 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
14. scaf11 ENSDARG00000045885 3531 1.92 - - - - - - 0.968 - 0.952 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
15. atf6 ENSDARG00000012656 3873 1.918 - - - - - - 0.946 - 0.972 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
16. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.903 - - - - - - 0.952 - 0.951 dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
17. gstm3 gstm3 1164 1.859 - - - - 0.892 - - - 0.967
18. NBEAL1 ENSDARG00000099547 1112 1.838 - 0.881 - - - - 0.957 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
19. PLXNB2 PLXNB2 99 1.837 - - - - 0.867 - 0.970 - -
20. si:ch211-22i13.2 ENSDARG00000043485 4719 1.836 - - - - - - 0.884 - 0.952 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
21. tpd52l2b ENSDARG00000013655 9460 1.834 - - - - - - 0.940 - 0.894 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
22. wipi1 ENSDARG00000040657 2732 1.82 - - - - - - 0.979 - 0.841 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
23. nt5c1bb ENSDARG00000033742 1248 1.82 - 0.855 - - - - - - 0.965 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
24. SLITRK6 ENSDARG00000098769 217 1.81 - 0.842 - - - - 0.968 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
25. VPS37C ENSDARG00000031836 906 1.81 0.835 - - - - - 0.975 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
26. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.797 - - - - - - 0.949 - 0.848 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
27. dusp2 ENSDARG00000098108 353 1.789 - 0.822 - - - - 0.967 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
28. gnb1b ENSDARG00000104372 1077 1.787 - 0.820 - - - - - - 0.967 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
29. pkp1b ENSDARG00000052705 1077 1.781 - - - - - 0.911 0.870 - - plakophilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-417]
30. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.781 - 0.811 - - - - 0.970 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
31. rpz5 ENSDARG00000075718 1703 1.778 - 0.863 - - - - 0.915 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
32. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.768 - - - - - 0.880 0.888 - - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
33. zgc:63587 ENSDARG00000017140 8399 1.764 - - - - - - 0.910 - 0.854 zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
34. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.74 - 0.774 - - - - - - 0.966 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
35. si:dkey-57c15.9 si:dkey-57c15.9 665 1.735 - 0.757 - - - - - - 0.978
36. actr10 ENSDARG00000038432 1598 1.733 - 0.780 - - - - 0.953 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
37. zgc:165653 ENSDARG00000104713 1603 1.732 0.755 - - - - - 0.977 - - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
38. atl3 ENSDARG00000004270 2806 1.722 - - - - - 0.793 0.929 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
39. wbscr22 wbscr22 644 1.719 - - - - 0.758 - 0.961 - -
40. necap2 ENSDARG00000046002 4372 1.715 - - - - - 0.774 - - 0.941 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
41. zgc:66014 817 1.705 - 0.728 - - - - 0.977 - - zgc:66014, transcript variant X6
42. wu:fc34e06 1793 1.704 - - - - - 0.730 0.974 - - wu:fc34e06, transcript variant X10
43. slc35b3 ENSDARG00000045437 370 1.704 - - 0.744 - - - 0.960 - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Source:ZFIN;Acc:ZDB-GENE-060312-46]
44. illr4 ENSDARG00000008075 164 1.7 - 0.732 - - - - 0.968 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
45. ifrd1 ENSDARG00000068708 2858 1.698 - 0.753 - - - - 0.945 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
46. cope ENSDARG00000018562 17276 1.694 - - - - - 0.754 0.940 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
47. TAF2 ENSDARG00000102307 1401 1.693 - - - - 0.726 - 0.967 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
48. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.692 - - 0.723 - - - - - 0.969 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
49. acn9 acn9 520 1.692 - 0.728 - - - - 0.964 - -
50. prim1 ENSDARG00000040163 909 1.69 0.721 - - - - - 0.969 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
51. esrp1 ENSDARG00000011245 2097 1.69 - - - - 0.719 - - - 0.971 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
52. dhodh ENSDARG00000051889 401 1.688 - 0.721 - - - - 0.967 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
53. lamb4 ENSDARG00000039133 1220 1.685 - - - - - 0.746 0.939 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
54. dnm1l ENSDARG00000015006 1729 1.685 - - - - 0.734 - 0.951 - - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
55. tnikb ENSDARG00000009031 1836 1.684 - - - - - 0.750 0.934 - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
56. zgc:56530 zgc:56530 6300 1.682 - - - - - 0.838 - - 0.844
57. map4k3a ENSDARG00000087742 771 1.682 - 0.710 - - - - - - 0.972 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
58. ap1b1 ENSDARG00000020621 3874 1.681 - 0.755 - - - - 0.926 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
59. USP31 ENSDARG00000074017 628 1.675 - 0.865 - - 0.810 - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
60. pex11g ENSDARG00000025559 129 1.675 0.845 0.830 - - - - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
61. PARD3B_1 PARD3B_1 1735 1.672 - - 0.728 - - - - - 0.944
62. tmem203 ENSDARG00000104996 1182 1.666 - - - - - 0.704 0.962 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
63. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.665 - - - - 0.708 - 0.957 - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
64. purba ENSDARG00000068822 2537 1.658 - - - - - 0.717 0.941 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
65. smyd4 ENSDARG00000060983 106 1.656 - 0.795 - - 0.861 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
66. PVRL4 1691 1.65 - 0.709 - - - - 0.941 - - poliovirus receptor-related 4
67. col16a1 ENSDARG00000009194 5600 1.633 - - - - - 0.817 - - 0.816 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
68. rab11al ENSDARG00000014340 2116 1.63 - - - - - 0.753 0.877 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
69. si:ch211-264e16.1 ENSDARG00000068947 1358 1.628 - - 0.796 - 0.832 - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
70. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.622 - - - - - 0.701 - - 0.921 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
71. tmbim4 ENSDARG00000014361 2549 1.622 0.715 - - - - - 0.907 - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
72. fa2h ENSDARG00000090063 1084 1.621 - - - - - 0.703 0.918 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
73. HHLA2 HHLA2 295 1.616 - 0.786 - - 0.830 - - - -
74. srek1ip1 ENSDARG00000043728 985 1.612 - 0.859 - - - 0.753 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
75. abi1a ENSDARG00000010155 5631 1.611 - - - - - - 0.721 - 0.890 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
76. gpcpd1 ENSDARG00000016011 2563 1.611 - - - - - 0.847 0.764 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
77. nufip2 ENSDARG00000069066 3965 1.609 - - - - - 0.813 - - 0.796 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
78. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.604 - 0.829 - - - - 0.775 - - aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
79. acsl3a ENSDARG00000032079 897 1.601 - 0.872 - - - - 0.729 - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
80. ywhah ENSDARG00000005560 11079 1.599 - - - - - - 0.726 - 0.873 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
81. vsig8b ENSDARG00000013685 246 1.594 - - 0.824 - 0.770 - - - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
82. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.592 - 0.702 - - - - 0.890 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
83. snx29 ENSDARG00000077317 239 1.588 - 0.803 - - 0.785 - - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
84. grhl2b ENSDARG00000061974 779 1.582 - 0.842 - - - 0.740 - - - grainyhead-like transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-060503-719]
85. tmem189 ENSDARG00000042732 4004 1.575 - - - - - 0.871 0.704 - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
86. lad1 ENSDARG00000022698 127 1.571 - 0.852 - - 0.719 - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
87. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.568 - 0.843 0.725 - - - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
88. FUZ ENSDARG00000079730 821 1.568 - 0.806 - - - 0.762 - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
89. lxn ENSDARG00000043102 415 1.567 - 0.860 - - - 0.707 - - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
90. BX548021.2_1 BX548021.2_1 164 1.566 - 0.744 0.822 - - - - - -
91. si:dkey-87o1.2 ENSDARG00000095796 6602 1.564 - - - - 0.720 - 0.844 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
92. alox12 ENSDARG00000069463 5787 1.561 - - - - - 0.815 0.746 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
93. cnih cnih 8292 1.554 - - - - - - 0.820 - 0.734
94. polr3glb ENSDARG00000013734 1199 1.547 - 0.780 - - 0.767 - - - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
95. zgc:153284 ENSDARG00000036876, ENSDARG00000109673 3507 1.547 - - - - 0.794 0.753 - - - zgc:153284 [Source:ZFIN;Acc:ZDB-GENE-060825-317]
96. SZT2 252 1.547 0.704 - 0.843 - - - - - - seizure threshold 2 homolog (mouse)
97. scamp2 ENSDARG00000010279 2325 1.545 0.841 - - - - 0.704 - - - secretory carrier membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2702]
98. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.544 - - 0.735 - 0.809 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
99. fnbp1l ENSDARG00000020131 79 1.538 - 0.710 0.828 - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
100. GPR31 431 1.528 - - - - 0.810 0.718 - - - G protein-coupled receptor 31

There are 1786 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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