Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lnpb

Gene Name Gene ID Reads Annotation
lnpb 781 limb and neural patterns b, transcript variant X3










Genes with expression patterns similar to lnpb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lnpb 781 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 limb and neural patterns b, transcript variant X3
2. rbfa ENSDARG00000073705 601 1.639 - 0.813 - - - 0.826 - - - ribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
3. lgals2a ENSDARG00000054942 888 1.621 - 0.878 - - - - 0.743 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
4. si:ch211-89o9.4 ENSDARG00000093237 153 1.591 - - - - - 0.849 0.742 - - si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
5. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.585 - 0.725 - 0.860 - - - - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
6. TMEM128 552 1.565 - 0.753 - 0.812 - - - - - transmembrane protein 128
7. BX927294.1 BX927294.1 361 1.564 - - - 0.822 - - - 0.742 -
8. MTA1 ENSDARG00000007198 731 1.538 - - - 0.717 - - 0.821 - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
9. kcnj2 kcnj2 326 1.532 - 0.780 - - - - 0.752 - -
10. hemk1 ENSDARG00000078894 397 1.532 - 0.713 - - - 0.819 - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
11. CABZ01086825.1 CABZ01086825.1 573 1.494 - 0.775 - - - - 0.719 - -
12. ndufa5 ENSDARG00000039346 2617 1.486 - 0.784 - 0.702 - - - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
13. cdk16 ENSDARG00000032072 1993 1.47 - - - 0.700 - - - 0.770 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
14. txnipb ENSDARG00000070000 2365 1.449 - 0.730 - - - - 0.719 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
15. zgc:153662 zgc:153662 4604 1.445 - 0.744 - - - - 0.701 - -
16. smyd1b ENSDARG00000091253 4964 1.432 - 0.713 - - - 0.719 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
17. wbscr22 wbscr22 644 1.422 - 0.712 - 0.710 - - - - -
18. tnnc1b ENSDARG00000037539 13945 1.413 - 0.706 - - - - 0.707 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
19. pebp1 ENSDARG00000042069 6651 0.916 - 0.916 - - - - - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
20. fam84a ENSDARG00000018921 375 0.91 - 0.910 - - - - - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
21. ebf3 ebf3 4238 0.908 - 0.908 - - - - - - -
22. ARHGAP32 ARHGAP32 670 0.906 - 0.906 - - - - - - -
23. CABZ01090021.1 CABZ01090021.1 655 0.906 - 0.906 - - - - - - -
24. MIS18BP1 ENSDARG00000042563 229 0.905 - - - 0.905 - - - - - MIS18 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-151]
25. chmp1a ENSDARG00000102643 1078 0.9 - - - 0.900 - - - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
26. n4bp2 ENSDARG00000061451, ENSDARG00000113406 238 0.896 - - - 0.896 - - - - - NEDD4 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-061103-451]
27. KCNV1 ENSDARG00000070092 301 0.894 - 0.894 - - - - - - - potassium voltage-gated channel modifier subfamily V member 1 [Source:HGNC Symbol;Acc:HGNC:18861]
28. ENSDARG00000074422 ENSDARG00000074422 61 0.894 - - - 0.894 - - - - -
29. znf668 ENSDARG00000025226, ENSDARG00000112533 177 0.892 - - - 0.892 - - - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
30. hbegfa ENSDARG00000075121 1865 0.891 - - - 0.891 - - - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
31. zgc:64189 ENSDARG00000033501 244 0.89 - - - 0.890 - - - - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
32. si:dkey-71b5.7 ENSDARG00000080675 94 0.89 - - - 0.890 - - - - - si:dkey-71b5.7 [Source:ZFIN;Acc:ZDB-GENE-100922-124]
33. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.89 - - - 0.890 - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
34. CABZ01005777.1 CABZ01005777.1 505 0.889 - - - 0.889 - - - - -
35. nudt1 ENSDARG00000030573 268 0.889 - - - 0.889 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
36. mntb ENSDARG00000073988 1023 0.888 - - - 0.888 - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
37. zgc:171422 ENSDARG00000104715 255 0.888 - - - 0.888 - - - - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
38. nexmifb ENSDARG00000029296 416 0.887 - - - 0.887 - - - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
39. CAPN15 ENSDARG00000060600 248 0.887 - - - 0.887 - - - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
40. furinb ENSDARG00000070971 213 0.886 - - - 0.886 - - - - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
41. BSN BSN 463 0.886 - - - 0.886 - - - - -
42. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 0.885 - - - 0.885 - - - - -
43. phf20a ENSDARG00000002750 90 0.884 - - - 0.884 - - - - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
44. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 0.884 - - - 0.884 - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
45. ankmy2a ENSDARG00000005948 141 0.883 - - - - - 0.883 - - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
46. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 0.882 - - - 0.882 - - - - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
47. clasp1a ENSDARG00000010280 1158 0.882 - - - 0.882 - - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
48. nalcn ENSDARG00000001835 294 0.881 - - - 0.881 - - - - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
49. SNORD94 SNORD94 57 0.881 - - - 0.881 - - - - -
50. GAB2 ENSDARG00000105120 147 0.881 - - - 0.881 - - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
51. si:ch211-255f4.8 ENSDARG00000103571 91 0.88 - - - 0.880 - - - - - si:ch211-255f4.8 [Source:ZFIN;Acc:ZDB-GENE-050208-709]
52. si:ch73-44m9.2 ENSDARG00000094821 101 0.88 - - - 0.880 - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
53. rnf32 ENSDARG00000060035, ENSDARG00000116092 122 0.88 - - - 0.880 - - - - - ring finger protein 32 [Source:ZFIN;Acc:ZDB-GENE-061013-39]
54. chic2 ENSDARG00000022690 184 0.879 - - - 0.879 - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
55. syn1 ENSDARG00000060368, ENSDARG00000111164 397 0.879 - - - 0.879 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
56. GLB1L2 ENSDARG00000034941 74 0.878 - - - 0.878 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
57. CABZ01081749.1 CABZ01081749.1 637 0.878 - - - 0.878 - - - - -
58. lrrc48 lrrc48 50 0.878 - - - 0.878 - - - - -
59. SACM1L SACM1L 416 0.877 - - - 0.877 - - - - -
60. KLHL35 ENSDARG00000063577 77 0.877 - - - 0.877 - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
61. klhl23 ENSDARG00000078475 92 0.876 - - - 0.876 - - - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
62. prkra ENSDARG00000076718 606 0.876 - - - 0.876 - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
63. bend3 ENSDARG00000076903 320 0.876 - - - 0.876 - - - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
64. tnnt2d ENSDARG00000002988 7590 0.875 - 0.875 - - - - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
65. si:ch211-113p18.3 ENSDARG00000087835 377 0.875 - - - 0.875 - - - - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
66. tex15 ENSDARG00000098929 60 0.873 - - - 0.873 - - - - - testis expressed 15 [Source:ZFIN;Acc:ZDB-GENE-091204-395]
67. rtkn2 rtkn2 1092 0.873 - - - 0.873 - - - - -
68. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.873 - 0.873 - - - - - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
69. KBTBD2 ENSDARG00000087226 707 0.873 - - - 0.873 - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
70. trip4 ENSDARG00000098074 79 0.873 - - - 0.873 - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
71. U3 U3 287 0.873 - - - 0.873 - - - - -
72. tfip11 ENSDARG00000056932 479 0.872 - - - 0.872 - - - - - tuftelin interacting protein 11 [Source:ZFIN;Acc:ZDB-GENE-040718-479]
73. gclc ENSDARG00000013095 2146 0.872 - - - 0.872 - - - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
74. ugt5c3 ENSDARG00000061439 142 0.871 - - - 0.871 - - - - - UDP glucuronosyltransferase 5 family, polypeptide C3 [Source:ZFIN;Acc:ZDB-GENE-050419-23]
75. rsph4a ENSDARG00000067606 132 0.87 - - - 0.870 - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
76. dnah12 ENSDARG00000059987 110 0.869 - - - 0.869 - - - - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
77. sat2b ENSDARG00000104221 674 0.868 - 0.868 - - - - - - - spermidine/spermine N1-acetyltransferase family member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-292]
78. KLHL30 ENSDARG00000076094 366 0.868 - - - 0.868 - - - - - kelch-like family member 30 [Source:ZFIN;Acc:ZDB-GENE-100913-2]
79. nab2 ENSDARG00000078076 108 0.868 - - - 0.868 - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
80. wu:fc47e11 539 0.868 - - - - - 0.868 - - - wu:fc47e11
81. mcat ENSDARG00000016613, ENSDARG00000096473 140 0.867 - 0.867 - - - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
82. iqsec2 iqsec2 304 0.867 - - - 0.867 - - - - -
83. s100z ENSDARG00000038729 442 0.866 - - - 0.866 - - - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
84. stat5.2 stat5.2 1187 0.866 - - - 0.866 - - - - -
85. ZNF710 ZNF710 766 0.865 - - - 0.865 - - - - -
86. C8H1orf194 C8H1orf194 111 0.864 - - - 0.864 - - - - -
87. gltpd1 gltpd1 377 0.864 - - - 0.864 - - - - -
88. tmem194a tmem194a 745 0.862 - - - 0.862 - - - - -
89. KLHL33 ENSDARG00000105343 219 0.862 - - - 0.862 - - - - - kelch-like family member 33 [Source:ZFIN;Acc:ZDB-GENE-131016-4]
90. cog2 ENSDARG00000004037 462 0.861 - - - 0.861 - - - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
91. EPC1 EPC1 500 0.861 - 0.861 - - - - - - -
92. pkn3 ENSDARG00000079585 521 0.86 - - - 0.860 - - - - - protein kinase N3 [Source:ZFIN;Acc:ZDB-GENE-030131-1902]
93. msxe msxe 362 0.86 - - - 0.860 - - - - -
94. CR524823.3 CR524823.3 124 0.859 - - - 0.859 - - - - -
95. gtf2h2 ENSDARG00000016514 380 0.857 - - - 0.857 - - - - - general transcription factor IIH, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1959]
96. BX649554.3_1 BX649554.3_1 1071 0.857 - - - 0.857 - - - - -
97. mapk12b ENSDARG00000006409 2246 0.856 - 0.856 - - - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
98. CLDN10 CLDN10 38 0.856 - 0.856 - - - - - - -
99. hhipl1 ENSDARG00000062501 210 0.855 - - - 0.855 - - - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
100. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.855 - - - 0.855 - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]

There are 700 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA